# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 198 HTH_34 PF13601.1 80 2.8e-05 12.9 0.0 1 1 1.3e-05 6.4e-05 11.7 0.0 6 52 41 91 38 99 0.81 # 1157 # 1750 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 1_3 - 198 Rrf2 PF02082.15 83 1.1e-05 14.3 0.0 1 1 1e-05 5e-05 12.2 0.0 9 58 39 86 33 87 0.82 # 1157 # 1750 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 1_3 - 198 TFIIE_alpha PF02002.12 105 1.4e-08 23.0 0.0 1 2 0.0002 0.00098 7.4 0.0 5 62 27 88 24 124 0.75 # 1157 # 1750 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 1_3 - 198 TFIIE_alpha PF02002.12 105 1.4e-08 23.0 0.0 2 2 2.7e-06 1.4e-05 13.4 0.0 25 71 147 193 142 195 0.93 # 1157 # 1750 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.407 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ba081d2d-7591-491f-9cfa-5abf0555f0c0 # Target file: checkm_output/bins/pm1928/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1928/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ba081d2d-7591-491f-9cfa-5abf0555f0c0 checkm_output/bins/pm1928/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:40 2017 # [ok]