# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 274 DDE_Tnp_1 PF01609.16 213 6.3e-15 44.2 0.0 1 1 1.6e-15 9.3e-15 43.6 0.0 4 161 91 273 88 274 0.93 # 2979 # 3800 # 1 # ID=1_6;partial=01;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.444 1_4 - 86 DDE_Tnp_1_4 PF13701.1 449 2.9e-08 21.1 0.3 1 1 5.3e-09 3.2e-08 21.0 0.3 365 438 10 83 6 85 0.92 # 2202 # 2459 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AAA;rbs_spacer=6bp;gc_cont=0.368 1_6 - 274 Dimerisation PF08100.6 51 1.3e-05 14.0 0.2 1 2 1.7e-05 0.0001 11.1 0.0 16 47 29 65 27 66 0.80 # 2979 # 3800 # 1 # ID=1_6;partial=01;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.444 1_6 - 274 Dimerisation PF08100.6 51 1.3e-05 14.0 0.2 2 2 0.1 0.6 -0.9 0.0 26 37 144 154 141 157 0.80 # 2979 # 3800 # 1 # ID=1_6;partial=01;start_type=ATG;rbs_motif=TAA;rbs_spacer=12bp;gc_cont=0.444 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7823985d-ef8c-4701-bf2f-bdcba3638a56 # Target file: checkm_output/bins/pm1923/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1923/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7823985d-ef8c-4701-bf2f-bdcba3638a56 checkm_output/bins/pm1923/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:33 2017 # [ok]