# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 112 zf-ribbon_3 PF13248.1 26 0.00015 10.2 7.3 1 2 0.00017 0.0012 7.4 5.8 3 25 74 101 72 102 0.65 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zf-ribbon_3 PF13248.1 26 0.00015 10.2 7.3 2 2 1.2e-05 8.5e-05 11.0 0.9 18 24 94 100 92 108 0.67 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 Ribosomal_S27e PF01667.12 55 6.3e-06 14.9 1.1 1 1 1.5e-06 1.1e-05 14.2 1.1 5 33 71 99 68 104 0.90 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_4 PF13717.1 36 1.2e-06 17.4 0.2 1 2 7.9e-05 0.00056 8.9 0.1 2 14 73 85 73 87 0.85 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_4 PF13717.1 36 1.2e-06 17.4 0.2 2 2 0.0005 0.0035 6.3 0.0 5 19 95 109 94 111 0.83 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_5 PF13719.1 37 4.7e-07 18.6 0.1 1 2 4.6e-05 0.00032 9.5 0.0 2 14 73 85 72 88 0.84 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_5 PF13719.1 37 4.7e-07 18.6 0.1 2 2 0.00031 0.0022 6.8 0.0 5 19 95 109 94 111 0.85 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 Zn-ribbon_8 PF09723.5 42 0.00011 11.4 4.7 1 1 3.8e-05 0.00027 10.1 4.7 7 35 75 101 74 105 0.90 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_2 PF13240.1 23 0.0016 7.3 7.5 1 2 0.015 0.1 1.5 0.1 1 9 75 83 75 85 0.75 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_4 - 112 zinc_ribbon_2 PF13240.1 23 0.0016 7.3 7.5 2 2 8.7e-05 0.00061 8.6 0.8 15 21 94 100 93 102 0.66 # 2771 # 3106 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_1 - 272 Pterin_bind PF00809.17 210 2e-61 196.1 0.0 1 1 3.4e-62 2.4e-61 195.9 0.0 1 209 10 216 10 217 0.98 # 79 # 894 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/e181a06b-5978-42c0-8120-a5b87138f9f8 # Target file: checkm_output/bins/pm1920/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1920/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e181a06b-5978-42c0-8120-a5b87138f9f8 checkm_output/bins/pm1920/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:33 2017 # [ok]