# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_16 - 332 ATP-synt_ab PF00006.20 215 0.00036 12.4 0.0 1 1 8.8e-06 0.00058 11.7 0.0 16 62 159 205 151 247 0.86 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 KaiC PF06745.8 227 0.00011 13.6 0.0 1 1 3e-06 0.0002 12.8 0.0 16 53 155 190 148 240 0.77 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 ABC_tran PF00005.22 137 1e-06 21.4 0.0 1 1 5e-08 1.6e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_9 - 867 ABC_tran PF00005.22 137 0.00045 12.9 0.0 1 1 4.6e-05 0.0015 11.2 0.0 14 38 494 518 481 550 0.83 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 3_4 - 199 HTH_22 PF13309.1 64 4.1e-06 18.9 0.1 1 1 3.3e-07 1.1e-05 17.5 0.1 45 62 168 185 166 187 0.92 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_27 - 187 HTH_22 PF13309.1 64 1.7e-05 16.9 0.4 1 1 2.7e-06 8.8e-05 14.6 0.0 47 64 166 183 164 183 0.93 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_3 - 422 HHH_5 PF14520.1 60 1.9e-07 23.6 0.6 1 1 7.4e-08 4.9e-06 19.0 0.6 8 55 181 278 177 282 0.65 # 1844 # 3109 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 332 Sigma54_activat PF00158.21 168 5.6e-06 18.2 0.0 1 1 3.1e-07 1e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 Sigma54_activat PF00158.21 168 0.00011 14.0 0.4 1 1 9.5e-06 0.00031 12.5 0.4 8 130 480 600 473 606 0.79 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 FtsK_SpoIIIE PF01580.13 205 5.7e-07 21.5 0.0 1 1 5.1e-08 1.1e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_9 - 867 FtsK_SpoIIIE PF01580.13 205 7.7e-06 17.8 0.0 1 1 8.1e-07 1.8e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_19 - 510 FtsK_SpoIIIE PF01580.13 205 0.00043 12.1 0.0 1 1 3.4e-05 0.00075 11.3 0.0 39 59 124 147 95 153 0.78 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 3_4 - 199 SpoIIID PF12116.3 82 2.7e-05 16.4 0.1 1 2 0.01 0.67 2.3 0.0 33 55 8 30 5 44 0.87 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 3_4 - 199 SpoIIID PF12116.3 82 2.7e-05 16.4 0.1 2 2 1.3e-05 0.00085 11.6 0.0 17 42 163 188 151 197 0.84 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_16 - 332 MobB PF03205.9 140 5.8e-06 18.4 1.9 1 1 1.5e-07 9.9e-06 17.6 0.3 2 39 160 196 159 201 0.83 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 5_2 - 251 HTH_Tnp_4 PF13613.1 53 0.00045 12.1 0.3 1 1 4.2e-05 0.0027 9.6 0.1 28 52 53 77 29 78 0.87 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_27 - 187 HTH_8 PF02954.14 42 8.5e-05 14.4 0.2 1 2 0.023 1.5 0.8 0.1 2 12 114 124 113 124 0.85 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_27 - 187 HTH_8 PF02954.14 42 8.5e-05 14.4 0.2 2 2 1.6e-05 0.0011 10.9 0.0 20 37 163 180 159 183 0.86 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 2_16 - 332 Myosin_head PF00063.16 689 0.0001 12.7 0.0 1 1 2.2e-06 0.00015 12.2 0.0 84 110 157 183 147 209 0.90 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_4 - 199 TetR_N PF00440.18 47 0.00012 14.1 0.0 1 1 3.6e-06 0.00024 13.1 0.0 17 36 166 185 164 185 0.94 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_16 - 332 AAA_19 PF13245.1 76 0.00042 12.4 0.1 1 1 2.8e-05 0.00092 11.3 0.1 5 48 153 191 149 224 0.78 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 AAA_19 PF13245.1 76 0.0015 10.6 3.7 1 2 0.00056 0.019 7.2 0.2 2 75 485 551 484 552 0.75 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 AAA_19 PF13245.1 76 0.0015 10.6 3.7 2 2 0.027 0.9 1.7 0.0 17 32 706 721 705 731 0.82 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_16 - 239 CbiA PF01656.18 195 1.8e-06 19.8 0.7 1 2 0.00041 0.027 6.1 0.1 1 19 3 21 3 24 0.89 # 10093 # 10809 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_16 - 239 CbiA PF01656.18 195 1.8e-06 19.8 0.7 2 2 6.6e-06 0.00043 12.0 0.0 110 165 89 142 33 168 0.77 # 10093 # 10809 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 3_6 - 235 Rep_3 PF01051.16 222 9.6e-44 141.9 0.4 1 1 1.7e-45 1.1e-43 141.7 0.4 2 213 3 222 2 228 0.92 # 5302 # 6006 # -1 # ID=3_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.438 7_1 - 235 rve PF00665.21 120 8.8e-13 40.8 0.1 1 2 0.03 0.98 1.9 0.0 78 102 27 49 6 54 0.84 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 7_1 - 235 rve PF00665.21 120 8.8e-13 40.8 0.1 2 2 4.9e-13 1.6e-11 36.7 0.0 9 119 75 182 70 183 0.89 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 5_2 - 251 rve PF00665.21 120 6.1e-08 25.2 0.0 1 1 3.9e-09 1.3e-07 24.1 0.0 8 82 86 157 81 193 0.89 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 2_16 - 332 AAA_23 PF13476.1 202 0.00029 13.5 0.0 1 1 1.4e-05 0.00047 12.8 0.0 19 39 158 178 105 184 0.91 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_9 - 867 AAA_23 PF13476.1 202 0.0031 10.1 0.0 1 1 9.5e-05 0.0031 10.1 0.0 22 39 494 511 464 521 0.84 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_16 - 332 Zeta_toxin PF06414.7 201 1e-06 20.3 0.0 1 1 2.7e-08 1.8e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 AAA_30 PF13604.1 196 1.4e-53 173.7 7.6 1 1 1.5e-54 5.1e-53 171.9 6.4 1 192 477 660 477 663 0.97 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 AAA_30 PF13604.1 196 0.0001 14.3 0.1 1 2 4.7e-05 0.0016 10.4 0.1 11 51 151 190 145 197 0.80 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_30 PF13604.1 196 0.0001 14.3 0.1 2 2 0.024 0.78 1.6 0.0 121 178 204 258 191 272 0.77 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 HTH_Tnp_1 PF01527.15 76 0.00014 14.2 0.1 1 1 8.9e-06 0.00029 13.1 0.1 15 44 154 182 140 186 0.79 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 7_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00016 14.0 0.3 1 1 1.1e-05 0.00036 12.9 0.3 4 51 6 58 4 63 0.79 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_19 - 510 TraG-D_C PF12696.2 128 9e-22 69.7 0.0 1 1 2.2e-23 1.5e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_24 - 308 DDE_Tnp_1 PF01609.16 213 1.5e-24 79.0 0.8 1 1 3e-26 2e-24 78.6 0.8 4 205 115 286 112 293 0.88 # 19029 # 19952 # 1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 3_4 - 199 Sigma70_r4 PF04545.11 50 0.00034 12.3 0.0 1 1 1.8e-05 0.0012 10.5 0.0 19 37 164 182 154 189 0.88 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 AAA PF00004.24 132 2.2e-06 20.2 0.9 1 1 1.3e-07 8.5e-06 18.3 0.1 4 111 500 600 497 612 0.73 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 Parvo_NS1 PF01057.12 272 0.00056 11.1 0.0 1 1 1.4e-05 0.00094 10.4 0.0 104 138 148 182 140 188 0.90 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.3 0.0 1 2 0.0014 0.091 2.7 0.0 173 208 539 574 515 584 0.81 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Herpes_Helicase PF02689.9 819 1.4e-05 15.3 0.0 2 2 9.3e-06 0.00061 9.9 0.0 739 782 850 894 831 914 0.80 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 199 MRP-L20 PF12824.2 164 1.9e-06 20.2 0.0 1 1 4e-08 2.6e-06 19.8 0.0 69 133 132 194 116 198 0.77 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 Torsin PF06309.6 127 1.4e-05 17.3 0.0 1 1 6.1e-07 4.1e-05 15.8 0.0 19 85 460 526 452 537 0.83 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 199 MerR_1 PF13411.1 69 2.2e-05 16.5 0.1 1 2 0.0073 0.48 2.6 0.0 45 66 78 99 75 102 0.83 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 3_4 - 199 MerR_1 PF13411.1 69 2.2e-05 16.5 0.1 2 2 1.6e-05 0.001 11.2 0.0 2 29 167 194 166 198 0.87 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_16 - 332 cobW PF02492.14 178 1.4e-06 20.1 0.0 1 1 4.1e-08 2.7e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_16 PF13191.1 185 4.5e-07 22.3 0.0 1 1 3.4e-08 1.1e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_9 - 867 AAA_16 PF13191.1 185 0.00064 12.0 0.0 1 1 0.00018 0.006 8.9 0.0 25 47 492 514 481 574 0.85 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_16 - 332 AAA_22 PF13401.1 131 1.8e-07 23.7 0.0 1 1 1.8e-08 4e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_9 - 867 AAA_22 PF13401.1 131 7.1e-05 15.3 0.0 1 1 7.5e-05 0.0017 10.9 0.0 5 28 492 515 489 549 0.85 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_20 - 1079 AAA_22 PF13401.1 131 0.00042 12.8 0.2 1 1 0.00022 0.0049 9.3 0.2 4 125 494 598 490 603 0.81 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_27 - 187 NUMOD1 PF07453.8 37 0.00036 12.7 0.0 1 1 1.1e-05 0.00071 11.8 0.0 19 37 164 182 164 182 0.94 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 2_16 - 332 AAA_29 PF13555.1 62 0.00066 11.6 0.0 1 1 2.3e-05 0.0015 10.4 0.0 19 43 157 178 145 188 0.75 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 HTH_Tnp_IS630 PF01710.11 120 1.9e-05 16.7 0.0 1 1 6.4e-07 4.2e-05 15.6 0.0 10 42 157 185 151 186 0.86 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 7_1 - 235 HTH_32 PF13565.1 77 8.6e-07 22.1 0.2 1 1 2.3e-07 3.7e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 199 HTH_32 PF13565.1 77 1.2e-05 18.4 0.2 1 1 4.2e-06 7e-05 16.0 0.1 7 76 127 185 121 186 0.71 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 5_2 - 251 HTH_32 PF13565.1 77 5.3e-05 16.4 0.1 1 2 0.00037 0.0062 9.7 0.0 26 76 19 64 5 65 0.78 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 5_2 - 251 HTH_32 PF13565.1 77 5.3e-05 16.4 0.1 2 2 0.025 0.41 3.9 0.0 26 54 110 146 97 161 0.72 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 1_27 - 187 HTH_32 PF13565.1 77 0.00076 12.6 6.7 1 1 0.00011 0.0017 11.5 3.5 7 77 124 182 119 182 0.68 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_27 - 187 HTH_3 PF01381.17 55 0.00017 13.8 0.7 1 1 1.1e-05 0.00075 11.7 0.4 2 31 152 183 151 184 0.86 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 7_1 - 235 HTH_23 PF13384.1 50 3.8e-06 18.8 0.7 1 2 0.047 1 1.6 0.0 7 27 11 35 7 36 0.69 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 7_1 - 235 HTH_23 PF13384.1 50 3.8e-06 18.8 0.7 2 2 5.6e-06 0.00012 14.0 0.1 28 42 41 55 40 62 0.87 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 199 HTH_23 PF13384.1 50 4.2e-06 18.7 0.0 1 1 7.7e-07 1.7e-05 16.8 0.0 10 37 158 185 150 188 0.82 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_27 - 187 HTH_23 PF13384.1 50 1.3e-05 17.2 1.3 1 1 8.8e-07 1.9e-05 16.6 0.1 10 39 151 183 148 184 0.82 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 3_4 - 199 HTH_7 PF02796.10 45 6e-17 53.7 0.1 1 1 6.6e-18 2.2e-16 51.9 0.0 1 44 144 188 144 189 0.98 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_27 - 187 HTH_7 PF02796.10 45 6.8e-17 53.5 0.3 1 1 4.7e-18 1.6e-16 52.3 0.3 1 44 141 184 141 185 0.98 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 3_4 - 199 HTH_29 PF13551.1 112 0.00066 12.2 2.1 1 1 0.00029 0.019 7.5 0.7 39 106 131 184 122 185 0.54 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 7_1 - 235 DDE_Tnp_IS66 PF03050.9 271 8.6e-12 37.1 0.3 1 1 3.4e-13 1.1e-11 36.7 0.3 5 132 10 144 6 174 0.87 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 5_2 - 251 DDE_Tnp_IS66 PF03050.9 271 1.5e-07 23.2 0.0 1 1 5.9e-09 1.9e-07 22.8 0.0 6 116 25 131 20 154 0.84 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 2_16 - 332 Arch_ATPase PF01637.13 234 5.8e-06 18.4 0.0 1 1 1.6e-07 1.1e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 PhoH PF02562.11 205 2.2e-09 29.2 4.8 1 2 9.6e-07 3.2e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 PhoH PF02562.11 205 2.2e-09 29.2 4.8 2 2 3e-06 0.0001 13.9 0.1 120 162 562 605 553 635 0.82 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 PhoH PF02562.11 205 0.0002 12.9 0.0 1 1 1.1e-05 0.00037 12.1 0.0 14 45 153 184 143 210 0.79 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_2 - 264 SprT-like PF10263.4 157 2.5e-37 120.2 0.0 1 1 5.3e-39 3.5e-37 119.8 0.0 1 150 12 236 12 262 0.92 # 902 # 1693 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.521 2_16 - 332 ResIII PF04851.10 184 4.1e-06 19.0 0.0 1 1 9.8e-08 6.4e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 TrwB_AAD_bind PF10412.4 386 6.9e-119 389.1 0.0 1 1 3.7e-120 8.1e-119 388.9 0.0 1 385 112 490 112 491 0.95 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_9 - 867 TrwB_AAD_bind PF10412.4 386 6.1e-07 20.6 1.6 1 2 1.5e-06 3.2e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_9 - 867 TrwB_AAD_bind PF10412.4 386 6.1e-07 20.6 1.6 2 2 0.0042 0.093 3.5 0.0 102 168 741 806 720 812 0.79 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_16 - 332 TrwB_AAD_bind PF10412.4 386 9e-06 16.8 0.1 1 1 6.4e-07 1.4e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_18 PF13238.1 129 3.1e-06 19.9 0.0 1 1 2e-07 6.4e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 AAA_18 PF13238.1 129 8.5e-05 15.2 0.0 1 1 5.2e-06 0.00017 14.2 0.0 3 21 131 149 130 238 0.78 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_3 - 422 IMS_HHH PF11798.3 32 3.1e-07 22.6 0.0 1 1 1.4e-08 9e-07 21.2 0.0 4 32 171 199 168 199 0.85 # 1844 # 3109 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 332 GvpD PF07088.6 484 1.7e-06 18.9 0.0 1 1 3.9e-08 2.6e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 HTH_psq PF05225.11 45 7.8e-05 14.6 0.0 1 1 2.5e-06 0.00017 13.5 0.0 21 39 166 184 165 186 0.91 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 2_16 - 332 DUF258 PF03193.11 161 7.3e-05 14.3 0.0 1 1 2e-06 0.00013 13.5 0.0 29 61 151 184 129 224 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 DUF87 PF01935.12 229 7.3e-08 24.8 0.0 1 1 3.4e-09 1.1e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_16 - 332 DUF87 PF01935.12 229 1.7e-06 20.3 0.0 1 1 9.7e-08 3.2e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 HTH_28 PF13518.1 52 3.2e-05 16.3 0.1 1 1 1.4e-06 3.2e-05 16.3 0.1 9 34 158 183 147 184 0.84 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 7_1 - 235 HTH_28 PF13518.1 52 3.7e-05 16.1 1.2 1 1 7.6e-06 0.00017 14.0 1.2 22 36 40 54 13 55 0.76 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_4 - 199 HTH_28 PF13518.1 52 4.7e-05 15.7 0.0 1 1 1.3e-05 0.00028 13.3 0.0 14 32 167 185 159 191 0.87 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 3_4 - 199 HTH_24 PF13412.1 48 3e-05 15.7 0.0 1 2 0.032 2.1 0.2 0.0 30 46 74 90 69 104 0.81 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 3_4 - 199 HTH_24 PF13412.1 48 3e-05 15.7 0.0 2 2 4.6e-06 0.00031 12.5 0.0 10 38 158 186 157 188 0.92 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 2_16 - 332 Sigma54_activ_2 PF14532.1 138 1.6e-06 20.6 0.0 1 1 5e-08 3.3e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 HTH_10 PF04967.7 53 8.8e-06 17.6 0.2 1 2 0.055 3.6 -0.3 0.1 3 18 124 139 123 154 0.71 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_27 - 187 HTH_10 PF04967.7 53 8.8e-06 17.6 0.2 2 2 8.6e-07 5.7e-05 15.0 0.0 27 45 165 183 162 185 0.93 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 2_16 - 332 MMR_HSR1 PF01926.18 116 0.00029 13.2 0.0 1 1 7.1e-06 0.00047 12.5 0.0 2 41 161 205 160 310 0.84 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 DEAD PF00270.24 169 2e-06 19.7 0.0 1 1 5.7e-08 3.7e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 DUF2075 PF09848.4 352 6e-05 14.4 0.0 1 1 1.3e-06 8.6e-05 13.9 0.0 1 32 158 187 158 216 0.76 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 UvrD_C_2 PF13538.1 104 1.7e-16 52.6 0.1 1 1 1e-17 6.9e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 T2SE PF00437.15 272 2.1e-52 170.0 0.1 1 1 7.4e-54 2.4e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 T2SE PF00437.15 272 0.00058 11.1 0.1 1 1 3.1e-05 0.001 10.3 0.1 130 149 128 147 103 160 0.84 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_16 - 332 NACHT PF05729.7 166 5.9e-05 15.1 0.0 1 1 1.9e-06 0.00013 14.0 0.0 1 27 159 185 159 188 0.90 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 UPF0079 PF02367.12 123 4e-06 18.8 0.0 1 1 1.2e-07 8.1e-06 17.8 0.0 9 45 152 188 145 193 0.85 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_17 PF13207.1 121 0.00026 14.1 0.1 1 1 2.8e-05 0.00063 12.9 0.1 2 40 161 195 160 229 0.75 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 AAA_17 PF13207.1 121 0.00036 13.7 0.1 1 1 6.7e-05 0.0015 11.7 0.0 4 42 131 191 129 260 0.58 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_9 - 867 AAA_17 PF13207.1 121 0.00062 12.9 4.9 1 1 0.00023 0.005 10.0 0.0 3 21 495 513 494 565 0.80 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 2_16 - 332 AAA_7 PF12775.2 272 6.5e-05 14.4 0.0 1 1 2.3e-06 0.00015 13.2 0.0 25 64 150 189 139 209 0.86 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 TIGR03346 TIGR03346 853 9.7e-05 12.8 0.0 1 1 2e-06 0.00013 12.3 0.0 598 641 161 204 149 238 0.89 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_20 - 1079 Viral_helicase1 PF01443.13 234 4.6e-15 48.0 5.4 1 2 2.3e-08 1.5e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Viral_helicase1 PF01443.13 234 4.6e-15 48.0 5.4 2 2 3e-11 2e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_16 - 332 Pox_A32 PF04665.7 241 6.6e-05 14.6 0.0 1 1 1.7e-06 0.00011 13.8 0.0 12 46 157 191 150 210 0.85 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_19 - 510 AAA_14 PF13173.1 128 8.2e-06 18.1 0.0 1 2 4.3e-06 0.00014 14.1 0.0 6 89 130 213 125 234 0.76 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_19 - 510 AAA_14 PF13173.1 128 8.2e-06 18.1 0.0 2 2 0.043 1.4 1.1 0.0 53 81 340 372 300 391 0.57 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_16 - 332 AAA_14 PF13173.1 128 0.00018 13.7 0.1 1 2 0.0044 0.15 4.3 0.0 64 96 135 165 98 166 0.69 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_14 PF13173.1 128 0.00018 13.7 0.1 2 2 6.3e-05 0.0021 10.3 0.0 2 35 158 191 157 213 0.80 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_33 PF13671.1 143 0.00024 13.3 0.0 1 1 5.9e-06 0.00039 12.6 0.0 2 26 161 188 160 256 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_27 - 187 CENP-B_N PF04218.8 53 1.8e-06 19.6 0.0 1 1 5.4e-08 3.5e-06 18.7 0.0 17 43 156 182 152 186 0.92 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_19 - 510 T4SS-DNA_transf PF02534.9 469 3.6e-12 37.8 0.0 1 1 7.9e-14 5.2e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_16 - 332 RNA_helicase PF00910.17 107 1.3e-05 17.7 0.1 1 2 3.5e-06 0.00023 13.7 0.0 1 25 161 185 161 242 0.75 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 RNA_helicase PF00910.17 107 1.3e-05 17.7 0.1 2 2 0.027 1.8 1.2 0.1 69 100 290 322 281 328 0.78 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 AAA_2 PF07724.9 171 3.8e-06 19.2 0.0 1 1 1e-07 6.8e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 3_2 - 567 DNA_methylase PF00145.12 335 1.8e-79 259.5 0.0 1 1 7.6e-81 5e-79 258.1 0.0 1 331 185 546 185 549 0.86 # 357 # 2057 # 1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.482 7_1 - 235 DDE_Tnp_IS240 PF13610.1 140 7.3e-53 170.6 0.0 1 1 3.1e-54 1e-52 170.2 0.0 4 139 75 212 73 213 0.99 # 2 # 706 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 5_2 - 251 DDE_Tnp_IS240 PF13610.1 140 2.5e-48 155.9 0.0 1 1 1.3e-49 4.3e-48 155.2 0.0 3 138 86 222 84 224 0.98 # 898 # 1650 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.546 3_4 - 199 HTH_17 PF12728.2 51 1.2e-05 17.8 0.0 1 1 4.1e-07 2.7e-05 16.8 0.0 2 27 166 191 165 196 0.90 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_17 - 140 RuvA_C PF07499.8 47 0.0011 11.5 0.8 1 2 0.01 0.68 2.6 0.3 39 46 6 13 5 14 0.92 # 10818 # 11237 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 1_17 - 140 RuvA_C PF07499.8 47 0.0011 11.5 0.8 2 2 0.00038 0.025 7.2 0.0 11 25 21 35 21 36 0.92 # 10818 # 11237 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.429 3_4 - 199 HTH_11 PF08279.7 55 3.9e-07 22.0 0.1 1 1 5.6e-08 1.9e-06 19.9 0.0 7 35 158 185 152 187 0.85 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_27 - 187 HTH_11 PF08279.7 55 9.7e-05 14.4 0.2 1 1 2.5e-05 0.00083 11.4 0.0 20 37 166 183 162 184 0.91 # 21975 # 22535 # 1 # ID=1_27;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.620 1_24 - 308 DDE_Tnp_1_5 PF13737.1 112 9e-49 156.7 0.0 1 2 2.2e-49 1.4e-47 152.8 0.0 1 112 19 130 19 130 0.96 # 19029 # 19952 # 1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_24 - 308 DDE_Tnp_1_5 PF13737.1 112 9e-49 156.7 0.0 2 2 0.031 2.1 0.9 0.0 42 68 263 291 234 297 0.82 # 19029 # 19952 # 1 # ID=1_24;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_20 - 1079 PIF1 PF05970.9 364 1.3e-06 19.8 0.1 1 2 1.3e-07 8.9e-06 17.1 0.0 2 65 478 537 477 588 0.85 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 PIF1 PF05970.9 364 1.3e-06 19.8 0.1 2 2 0.089 5.9 -2.1 0.0 334 363 795 823 783 824 0.84 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 199 TrmB PF01978.14 68 1.2e-05 17.3 0.0 1 1 4.3e-07 2.9e-05 16.1 0.0 6 42 149 185 146 188 0.94 # 3544 # 4140 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.467 1_20 - 1079 Helicase_RecD PF05127.9 177 1.3e-05 17.2 4.8 1 2 0.00059 0.039 5.9 0.1 122 146 498 522 481 539 0.76 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_20 - 1079 Helicase_RecD PF05127.9 177 1.3e-05 17.2 4.8 2 2 8.1e-06 0.00053 12.0 0.1 75 114 548 585 529 653 0.69 # 13707 # 16943 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.526 4_2 - 302 LYTB PF02401.13 281 0.00045 11.5 0.0 1 1 2e-05 0.0013 9.9 0.0 236 272 81 117 70 124 0.91 # 182 # 1087 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.656 2_9 - 867 AAA_10 PF12846.2 304 1.6e-35 115.3 0.1 1 1 2.4e-36 5.3e-35 113.6 0.0 2 292 492 772 491 780 0.84 # 3267 # 5867 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.497 1_19 - 510 AAA_10 PF12846.2 304 3.6e-07 22.2 0.1 1 2 2.1e-05 0.00045 12.0 0.1 3 41 128 166 126 177 0.92 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 1_19 - 510 AAA_10 PF12846.2 304 3.6e-07 22.2 0.1 2 2 0.00034 0.0074 8.0 0.0 214 286 339 414 307 431 0.75 # 12178 # 13707 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.439 2_16 - 332 AAA_10 PF12846.2 304 0.00017 13.3 0.0 1 1 1.2e-05 0.00027 12.7 0.0 3 29 160 185 158 233 0.81 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 2_16 - 332 IstB_IS21 PF01695.12 178 1.8e-05 16.5 0.0 1 1 4.5e-07 2.9e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 1_3 - 422 DNA_pol_lambd_f PF10391.4 52 1.4e-06 20.1 0.1 1 2 3e-07 2e-05 16.5 0.0 6 35 182 211 180 216 0.84 # 1844 # 3109 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_3 - 422 DNA_pol_lambd_f PF10391.4 52 1.4e-06 20.1 0.1 2 2 0.048 3.2 -0.2 0.0 6 20 265 279 256 283 0.80 # 1844 # 3109 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 2_16 - 332 GTP_EFTU PF00009.22 188 0.00014 13.6 0.2 1 1 3.5e-06 0.00023 12.9 0.2 2 32 157 187 156 205 0.83 # 10903 # 11898 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.500 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c2c1edcc-e643-4f23-b785-77a8ff97f14f # Target file: checkm_output/bins/pm1909/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1909/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c2c1edcc-e643-4f23-b785-77a8ff97f14f checkm_output/bins/pm1909/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:55:11 2017 # [ok]