# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 291 HTH_1 PF00126.22 60 1.4e-24 73.2 1.4 1 1 1.2e-24 2.4e-24 72.4 1.4 1 60 8 67 8 67 0.98 # 2 # 874 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 1_1 - 291 HTH_20 PF12840.2 61 1.8e-05 12.0 0.4 1 1 2.5e-05 4.9e-05 10.6 0.4 20 51 16 47 7 48 0.87 # 2 # 874 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.573 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9abb8153-8701-4580-8ce7-3c2164ad5407 # Target file: checkm_output/bins/pm1896/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1896/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9abb8153-8701-4580-8ce7-3c2164ad5407 checkm_output/bins/pm1896/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:54:52 2017 # [ok]