#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_8                  -             99 Sigma54_DBD          PF04552.8    160   4.7e-05   12.4   0.0   1   1   5.3e-06   4.7e-05   12.4   0.0    45    75    17    49     9    90 0.75 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 HTH_3                PF01381.17    55   1.8e-12   36.5   0.0   1   1   2.6e-13   2.3e-12   36.2   0.0     7    53    21    67    14    69 0.90 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 HTH_19               PF12844.2     64   8.7e-11   31.4   0.0   1   1   1.2e-11   1.1e-10   31.1   0.0    16    61    27    72    11    75 0.88 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 HTH_31               PF13560.1     64   1.4e-07   21.2   0.0   1   1   2.3e-08   2.1e-07   20.7   0.0    14    57    23    65    10    71 0.84 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 Mga                  PF05043.8     87     8e-05   12.5   0.0   1   1   1.7e-05   0.00015   11.6   0.0    24    64    16    57    12    66 0.77 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 HTH_26               PF13443.1     63     2e-05   14.3   0.0   1   1     3e-06   2.7e-05   13.9   0.0    11    51    24    63    15    72 0.88 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 MarR_2               PF12802.2     62   1.1e-05   14.6   0.0   1   1     2e-06   1.8e-05   14.0   0.0    21    43    23    45     8    46 0.81 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
1_8                  -             99 LacI                 PF00356.16    46   4.4e-05   12.7   0.1   1   1   7.2e-06   6.4e-05   12.1   0.1     4    34    28    58    27    64 0.82 # 3863 # 4159 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.414
#
# Program:         hmmsearch
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SEARCH
# Query file:      /tmp/4b6cb85c-bafc-4923-bbed-78f6dd7dbd04
# Target file:     checkm_output/bins/pm1873/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm1873/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/4b6cb85c-bafc-4923-bbed-78f6dd7dbd04 checkm_output/bins/pm1873/genes.faa 
# Current dir:     /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887
# Date:            Thu Nov 30 09:54:15 2017
# [ok]