# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 3_1 - 492 ATP-synt_ab PF00006.20 215 3.5e-05 17.0 0.1 1 2 0.044 7.5 -0.4 0.0 17 34 32 49 28 55 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ATP-synt_ab PF00006.20 215 3.5e-05 17.0 0.1 2 2 1.5e-06 0.00025 14.2 0.1 7 66 314 380 307 402 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_112 - 91 HTH_IclR PF09339.5 52 4.9e-06 19.8 0.0 1 1 1.6e-07 8.9e-06 18.9 0.0 4 43 9 47 8 49 0.92 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 5_2 - 66 HTH_IclR PF09339.5 52 8.8e-05 15.7 1.1 1 1 1.7e-06 9.8e-05 15.6 0.3 12 46 26 60 24 60 0.88 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_10 - 98 HTH_IclR PF09339.5 52 0.0014 11.9 0.0 1 1 6.2e-05 0.0035 10.6 0.0 25 49 38 62 28 64 0.95 # 4246 # 4539 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 1 4 1.1e-09 9.5e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 2 4 2.1e-07 1.8e-05 18.7 0.0 101 137 94 128 73 128 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 3 4 0.082 6.9 0.6 0.5 51 102 203 255 163 276 0.46 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 ABC_tran PF00005.22 137 5.6e-31 101.3 8.0 4 4 6.3e-19 5.4e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 ABC_tran PF00005.22 137 0.0012 12.8 0.0 1 1 2.7e-05 0.0023 11.9 0.0 11 46 61 96 55 117 0.85 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_7 - 91 HTH_35 PF13693.1 78 2.4e-16 53.0 0.2 1 1 1.8e-18 3e-16 52.7 0.2 7 71 20 83 15 89 0.89 # 3650 # 3922 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 3_1 - 492 DUF815 PF05673.8 250 4.3e-05 16.2 0.2 1 2 0.00013 0.021 7.3 0.0 58 77 35 54 27 63 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF815 PF05673.8 250 4.3e-05 16.2 0.2 2 2 0.00031 0.053 6.0 0.0 55 76 324 345 315 351 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_122 - 102 HTH_AsnC-type PF13404.1 42 1.7e-05 17.9 0.0 1 1 1.9e-07 3.2e-05 17.1 0.0 20 42 36 58 30 58 0.91 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_111 - 212 N6_Mtase PF02384.11 311 6.3e-07 22.3 0.0 1 1 5.9e-09 1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 94794 # 95429 # 1 # ID=1_111;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_44 - 185 TolB_N PF04052.8 105 0.0017 12.1 0.0 1 2 6.8e-05 0.012 9.4 0.0 22 57 25 60 19 72 0.81 # 36781 # 37335 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 1_44 - 185 TolB_N PF04052.8 105 0.0017 12.1 0.0 2 2 0.058 9.7 0.0 0.0 45 71 135 162 132 164 0.80 # 36781 # 37335 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 1.4e-07 24.8 0.0 1 2 3.8e-08 2.2e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 FtsK_SpoIIIE PF01580.13 205 1.4e-07 24.8 0.0 2 2 0.042 2.4 1.2 0.0 176 204 481 509 472 510 0.86 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 FtsK_SpoIIIE PF01580.13 205 1.4e-06 21.6 0.1 1 1 6.6e-08 3.7e-06 20.2 0.1 33 84 446 495 401 698 0.67 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_100 - 206 FtsK_SpoIIIE PF01580.13 205 0.0012 11.9 0.2 1 1 7.1e-05 0.004 10.3 0.0 34 53 4 23 1 28 0.83 # 88847 # 89464 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 1_7 - 91 HTH_38 PF13936.1 44 9.5e-05 15.6 0.0 1 2 6.5e-05 0.0055 10.0 0.1 9 39 16 47 14 49 0.87 # 3650 # 3922 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 1_7 - 91 HTH_38 PF13936.1 44 9.5e-05 15.6 0.0 2 2 0.0062 0.53 3.6 0.0 25 35 59 69 53 72 0.92 # 3650 # 3922 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 1_113 - 394 HTH_38 PF13936.1 44 0.00066 12.9 0.0 1 1 1.5e-05 0.0012 12.0 0.0 5 33 120 149 116 157 0.83 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 1_122 - 102 SpoIIID PF12116.3 82 0.0016 12.1 0.3 1 1 3.4e-05 0.0058 10.3 0.3 10 38 23 52 18 83 0.81 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 3_1 - 492 MobB PF03205.9 140 8.3e-05 16.0 0.4 1 2 0.0031 0.26 4.7 0.0 2 20 32 50 31 61 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 MobB PF03205.9 140 8.3e-05 16.0 0.4 2 2 0.00015 0.013 8.9 0.1 3 23 325 345 323 353 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 MobB PF03205.9 140 0.00091 12.6 0.0 1 1 3.5e-05 0.0029 10.9 0.0 4 34 176 206 175 214 0.90 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_12 - 504 UvrD-helicase PF00580.16 315 9.2e-17 54.9 3.9 1 2 5.8e-06 0.00049 13.1 0.1 2 38 8 44 7 64 0.81 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 UvrD-helicase PF00580.16 315 9.2e-17 54.9 3.9 2 2 6.8e-15 5.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_3 - 181 UvrD-helicase PF00580.16 315 0.00024 14.1 3.8 1 1 3.3e-06 0.00028 13.9 3.8 127 229 52 155 10 161 0.72 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_122 - 102 HTH_34 PF13601.1 80 0.0002 15.0 0.1 1 1 9.8e-06 0.00083 13.1 0.1 6 78 25 92 21 93 0.80 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 5_2 - 66 HTH_34 PF13601.1 80 0.00062 13.5 0.0 1 1 8.4e-06 0.00071 13.3 0.0 2 42 18 60 17 65 0.87 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 101 MarR PF01047.17 59 8.5e-05 15.9 0.0 1 1 1.9e-06 0.00016 15.0 0.0 9 37 33 61 32 63 0.93 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_122 - 102 MarR PF01047.17 59 0.00045 13.6 0.0 1 1 8.2e-06 0.00069 13.0 0.0 15 44 31 60 19 60 0.79 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_122 - 102 HTH_Tnp_4 PF13613.1 53 0.00014 15.0 0.0 1 1 1.3e-06 0.00022 14.4 0.0 18 47 32 61 31 67 0.89 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 1 3 0.0039 0.33 1.7 0.0 13 36 26 49 22 50 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 2 3 0.0094 0.79 0.5 7.1 629 703 191 268 173 301 0.38 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF3584 PF12128.3 1201 0.012 6.5 13.2 3 3 0.00017 0.015 6.2 0.3 19 37 324 342 318 343 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_14 - 347 DUF3584 PF12128.3 1201 0.028 5.3 51.1 1 2 0.01 0.86 0.4 32.3 377 534 86 242 42 246 0.65 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 DUF3584 PF12128.3 1201 0.028 5.3 51.1 2 2 4e-05 0.0034 8.3 20.6 613 709 225 327 220 345 0.80 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_92 - 622 DUF853 PF05872.7 504 1.4e-06 20.5 0.0 1 1 1.4e-08 2.3e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_119 - 226 TetR_N PF00440.18 47 6e-20 64.4 0.1 1 2 1.4e-20 1.2e-18 60.2 0.0 2 47 19 64 18 64 0.97 # 101660 # 102337 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_119 - 226 TetR_N PF00440.18 47 6e-20 64.4 0.1 2 2 0.025 2.1 1.8 0.1 1 16 179 194 179 196 0.91 # 101660 # 102337 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 3_3 - 181 TetR_N PF00440.18 47 0.0014 12.0 0.1 1 1 3.8e-05 0.0032 10.8 0.1 15 36 2 23 1 23 0.94 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_12 - 504 AAA_19 PF13245.1 76 2.7e-09 30.4 0.0 1 1 1.3e-10 7.1e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 AAA_19 PF13245.1 76 0.00026 14.4 0.1 1 1 1.1e-05 0.00059 13.3 0.1 10 35 61 86 51 112 0.76 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 AAA_19 PF13245.1 76 0.00028 14.3 0.1 1 1 2.2e-05 0.0012 12.2 0.0 10 48 323 360 317 370 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_114 - 262 CbiA PF01656.18 195 2e-30 99.3 0.0 1 1 3e-32 2.5e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_77 - 816 CbiA PF01656.18 195 0.00066 12.8 0.0 1 1 1.7e-05 0.0014 11.7 0.0 3 49 455 517 454 593 0.60 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_1 - 492 PRK PF00485.13 194 0.00049 13.3 0.2 1 2 0.0023 0.39 3.8 0.0 2 21 33 52 32 85 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PRK PF00485.13 194 0.00049 13.3 0.2 2 2 0.00027 0.045 6.9 0.0 2 33 325 364 325 409 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_113 - 394 Sigma70_r4_2 PF08281.7 54 0.00011 15.4 0.0 1 2 0.027 4.6 0.5 0.0 22 38 115 131 103 131 0.76 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 1_113 - 394 Sigma70_r4_2 PF08281.7 54 0.00011 15.4 0.0 2 2 1.8e-06 0.0003 13.9 0.0 17 48 127 158 122 161 0.91 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 3_4 - 276 Rep_3 PF01051.16 222 1.2e-41 136.3 1.0 1 1 1.5e-43 1.2e-41 136.3 1.0 44 222 14 192 3 192 0.94 # 3922 # 4749 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.354 2_31 - 367 Rep_3 PF01051.16 222 2.1e-07 24.4 0.0 1 1 6e-09 5.1e-07 23.1 0.0 43 221 139 322 113 323 0.83 # 16456 # 17556 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.520 4_1 - 235 rve PF00665.21 120 5.5e-13 42.7 0.1 1 2 0.015 2.5 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 235 rve PF00665.21 120 5.5e-13 42.7 0.1 2 2 6.1e-14 1e-11 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_9 - 101 Fe_dep_repress PF01325.14 60 0.00022 14.8 0.1 1 1 3e-06 0.0005 13.7 0.1 23 42 42 61 23 63 0.84 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 1 3 3.8e-05 0.0064 10.4 0.0 24 38 35 49 25 57 0.91 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 2 3 0.0033 0.55 4.1 1.4 141 177 187 244 105 280 0.58 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_23 PF13476.1 202 8.4e-08 26.4 8.6 3 3 1.9e-06 0.00032 14.7 0.4 22 39 325 342 288 343 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_17 - 290 TIGR00573 TIGR00573 217 3.8e-16 52.5 0.0 1 1 3.6e-18 6.1e-16 51.9 0.0 10 180 107 275 101 288 0.76 # 15941 # 16810 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 3_1 - 492 AAA_24 PF13479.1 213 6.4e-05 16.2 3.2 1 2 0.00068 0.11 5.6 0.0 8 38 35 64 30 111 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_24 PF13479.1 213 6.4e-05 16.2 3.2 2 2 2.2e-05 0.0037 10.5 0.1 4 23 323 342 321 356 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Zeta_toxin PF06414.7 201 8.6e-05 15.3 1.5 1 2 0.00024 0.041 6.6 0.0 21 40 35 54 30 63 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Zeta_toxin PF06414.7 201 8.6e-05 15.3 1.5 2 2 0.00017 0.03 7.0 0.0 20 40 326 346 309 353 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_30 PF13604.1 196 8.3e-08 25.7 0.1 1 2 1.8e-06 0.00016 15.0 0.0 19 80 20 81 11 109 0.77 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_30 PF13604.1 196 8.3e-08 25.7 0.1 2 2 0.00035 0.029 7.5 0.0 115 133 211 229 174 278 0.75 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_1 - 492 AAA_30 PF13604.1 196 5.4e-05 16.5 1.7 1 2 0.0044 0.37 4.0 0.0 18 39 31 51 25 61 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_30 PF13604.1 196 5.4e-05 16.5 1.7 2 2 4.7e-05 0.004 10.4 0.0 21 133 325 467 321 469 0.59 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 1 4 0.00018 0.031 7.1 0.0 29 43 35 49 25 65 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 2 4 0.00018 0.03 7.2 0.0 116 203 79 160 70 173 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 3 4 0.00011 0.019 7.8 0.1 27 44 325 342 311 344 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 SMC_N PF02463.14 220 3.7e-10 33.0 6.8 4 4 7.9e-06 0.0013 11.6 0.2 117 211 382 478 359 485 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00042 13.9 0.3 1 1 5.4e-06 0.00091 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_92 - 622 TraG-D_C PF12696.2 128 4.8e-15 49.2 0.0 1 1 1e-16 8.7e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 TraG-D_C PF12696.2 128 1.5e-06 21.8 0.0 1 1 4e-08 3.4e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 4_1 - 235 DDE_3 PF13358.1 146 0.0012 12.3 0.0 1 1 2.1e-05 0.0035 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_114 - 262 MipZ PF09140.6 261 3e-10 33.2 0.0 1 2 6.6e-10 1.1e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 MipZ PF09140.6 261 3e-10 33.2 0.0 2 2 0.00031 0.053 6.2 0.0 89 122 117 150 89 166 0.74 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_82 - 439 DivIC PF04977.10 80 0.00041 13.5 5.4 1 2 0.00039 0.066 6.4 0.9 26 55 63 92 48 100 0.74 # 73059 # 74375 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_82 - 439 DivIC PF04977.10 80 0.00041 13.5 5.4 2 2 6.6e-05 0.011 8.9 0.3 21 48 103 130 94 132 0.89 # 73059 # 74375 # -1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 1 4 3.9e-07 6.6e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 2 4 0.00027 0.046 7.2 0.0 237 303 100 160 91 160 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 3 4 4.9e-07 8.3e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_21 PF13304.1 303 3.2e-18 60.3 5.1 4 4 6.8e-08 1.2e-05 19.1 0.0 233 301 405 467 386 469 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 2_9 - 101 Sigma70_r4 PF04545.11 50 0.00021 14.2 0.0 1 1 2.2e-06 0.00037 13.5 0.0 15 42 36 63 35 67 0.88 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 3_1 - 492 AAA PF00004.24 132 6.9e-05 16.7 0.1 1 2 0.011 0.96 3.3 0.0 3 22 35 54 33 124 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA PF00004.24 132 6.9e-05 16.7 0.1 2 2 6.4e-05 0.0054 10.6 0.0 3 23 327 347 325 437 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA PF00004.24 132 0.00058 13.7 0.1 1 1 1.5e-05 0.0013 12.6 0.1 2 33 65 96 64 149 0.83 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_113 - 394 KorB PF08535.5 93 1.4e-31 102.2 0.2 1 1 3e-33 5e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 2_9 - 101 HTH_37 PF13744.1 80 1.7e-11 37.4 0.3 1 1 2.4e-13 2e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_122 - 102 HTH_37 PF13744.1 80 0.00057 13.4 0.0 1 1 1e-05 0.00085 12.8 0.0 20 50 22 52 13 60 0.85 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_87 - 221 LexA_DNA_bind PF01726.11 65 0.00074 12.8 0.0 1 1 8.2e-06 0.0014 11.9 0.0 39 62 124 147 118 149 0.87 # 77023 # 77685 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_112 - 91 Rrf2 PF02082.15 83 0.00093 13.0 0.4 1 1 1.1e-05 0.0019 12.0 0.4 1 52 1 49 1 74 0.86 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_112 - 91 HTH_43 PF09904.4 90 7e-12 38.7 0.0 1 1 4.7e-14 7.9e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_96 - 731 zf-C4_Topoisom PF01396.14 39 1.3e-14 47.1 16.8 1 2 5.3e-08 9e-06 18.8 4.7 3 37 636 669 634 671 0.90 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_96 - 731 zf-C4_Topoisom PF01396.14 39 1.3e-14 47.1 16.8 2 2 1.5e-12 2.6e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_112 - 91 HTH_27 PF13463.1 68 0.00085 13.3 0.0 1 1 6.4e-06 0.0011 13.0 0.0 8 44 13 48 9 76 0.78 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_120 - 400 TIGR01394 TIGR01394 594 0.0025 9.3 0.0 1 1 2.2e-05 0.0037 8.8 0.0 408 486 267 343 261 354 0.84 # 102416 # 103615 # 1 # ID=1_120;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_55 - 295 N6_N4_Mtase PF01555.13 231 6.8e-09 29.2 0.1 1 2 1.7e-06 0.00029 14.0 0.0 180 223 28 72 4 76 0.84 # 42654 # 43538 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_55 - 295 N6_N4_Mtase PF01555.13 231 6.8e-09 29.2 0.1 2 2 3.5e-06 0.00059 13.0 0.1 2 172 90 267 89 283 0.72 # 42654 # 43538 # -1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_122 - 102 P22_Cro PF14549.1 60 0.0011 12.4 0.1 1 1 1.2e-05 0.002 11.5 0.1 12 28 36 52 29 57 0.86 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 3_1 - 492 cobW PF02492.14 178 0.00045 13.3 1.3 1 2 0.0051 0.86 2.6 0.0 3 19 33 49 31 59 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 cobW PF02492.14 178 0.00045 13.3 1.3 2 2 6.1e-05 0.01 8.9 0.3 3 28 325 349 323 352 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_16 PF13191.1 185 1.6e-05 18.6 0.1 1 2 0.0016 0.067 6.8 0.0 29 44 35 50 22 151 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_16 PF13191.1 185 1.6e-05 18.6 0.1 2 2 0.00029 0.012 9.2 0.0 27 49 325 347 320 410 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_16 PF13191.1 185 4e-05 17.3 0.8 1 1 2.9e-06 0.00012 15.7 0.0 7 48 47 85 42 102 0.79 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_77 - 816 AAA_16 PF13191.1 185 5.1e-05 17.0 0.2 1 1 6.4e-06 0.00027 14.6 0.2 20 62 447 489 439 648 0.64 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_100 - 206 AAA_16 PF13191.1 185 7.2e-05 16.5 0.1 1 1 2.5e-06 0.00011 15.9 0.1 27 68 11 54 3 168 0.79 # 88847 # 89464 # -1 # ID=1_100;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.513 3_1 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 1 2 0.01 0.43 4.4 0.0 9 25 35 51 30 144 0.78 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_22 PF13401.1 131 3e-08 27.6 0.8 2 2 8.2e-08 3.4e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_22 PF13401.1 131 5.5e-05 17.0 0.0 1 2 0.00011 0.0045 10.8 0.0 8 68 23 92 17 122 0.63 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_22 PF13401.1 131 5.5e-05 17.0 0.0 2 2 0.02 0.84 3.4 0.0 82 124 189 225 164 229 0.77 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 AAA_22 PF13401.1 131 0.00021 15.1 0.0 1 1 1e-05 0.00044 14.1 0.0 5 54 62 103 56 164 0.76 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_92 - 622 AAA_22 PF13401.1 131 0.00021 15.1 0.0 1 1 1.7e-05 0.0007 13.4 0.0 3 68 171 231 166 287 0.83 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_12 - 504 TIGR01074 TIGR01074 668 2.1e-10 32.7 0.8 1 3 0.0039 0.65 1.4 0.0 8 33 12 38 7 57 0.74 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 TIGR01074 TIGR01074 668 2.1e-10 32.7 0.8 2 3 4.1e-07 6.9e-05 14.5 0.0 205 254 192 238 179 271 0.87 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 TIGR01074 TIGR01074 668 2.1e-10 32.7 0.8 3 3 7.5e-07 0.00013 13.6 0.1 534 614 396 472 347 493 0.80 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_122 - 102 NUMOD1 PF07453.8 37 0.0004 13.9 0.0 1 1 4.8e-06 0.00081 12.9 0.0 20 35 37 52 30 54 0.91 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_112 - 91 HTH_9 PF08221.6 62 0.00046 13.7 0.0 1 1 4.4e-06 0.00075 13.0 0.0 19 51 14 46 11 47 0.90 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_1 - 492 AAA_29 PF13555.1 62 7.3e-08 25.5 0.5 1 2 1.9e-05 0.0016 11.6 0.0 25 40 32 47 20 52 0.78 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_29 PF13555.1 62 7.3e-08 25.5 0.5 2 2 2.2e-05 0.0019 11.4 0.1 14 40 314 339 310 343 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_29 PF13555.1 62 0.002 11.3 1.0 1 1 5.4e-05 0.0045 10.2 0.3 21 38 59 76 54 79 0.86 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_122 - 102 HTH_1 PF00126.22 60 2.4e-24 78.6 0.7 1 1 3.8e-26 3.2e-24 78.2 0.7 4 60 24 80 21 80 0.96 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_112 - 91 HTH_1 PF00126.22 60 6e-05 16.4 0.0 1 1 1.1e-06 9.2e-05 15.8 0.0 22 51 31 61 30 76 0.79 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_1 - 492 AAA_28 PF13521.1 163 6.6e-05 16.6 4.3 1 2 0.023 3.9 1.0 0.0 2 20 33 51 32 66 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_28 PF13521.1 163 6.6e-05 16.6 4.3 2 2 5.6e-07 9.5e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_1 - 235 HTH_32 PF13565.1 77 2.2e-06 22.1 0.2 1 1 5.6e-08 9.5e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_12 - 504 TIGR00609 TIGR00609 1175 7.2e-12 37.5 1.1 1 4 0.0098 1.7 -0.2 0.0 13 27 23 37 13 47 0.82 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 TIGR00609 TIGR00609 1175 7.2e-12 37.5 1.1 2 4 1.4e-10 2.4e-08 25.8 0.0 368 454 190 270 179 282 0.80 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 TIGR00609 TIGR00609 1175 7.2e-12 37.5 1.1 3 4 0.011 1.8 -0.3 0.0 728 746 412 430 401 437 0.88 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 TIGR00609 TIGR00609 1175 7.2e-12 37.5 1.1 4 4 7.4e-05 0.013 6.8 0.1 789 818 446 475 417 502 0.70 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_125 - 498 A2L_zn_ribbon PF08792.5 33 0.014 8.6 3.6 1 2 0.004 0.68 3.2 0.5 5 29 75 100 73 101 0.85 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_125 - 498 A2L_zn_ribbon PF08792.5 33 0.014 8.6 3.6 2 2 0.00068 0.11 5.7 0.1 2 13 439 450 439 453 0.85 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_9 - 101 HTH_3 PF01381.17 55 7.7e-08 25.8 0.1 1 1 6.6e-10 1.1e-07 25.3 0.1 1 44 33 76 33 84 0.86 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 4_1 - 235 HTH_23 PF13384.1 50 1e-05 18.8 0.7 1 2 0.079 2.7 1.6 0.0 7 27 11 35 7 36 0.69 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_1 - 235 HTH_23 PF13384.1 50 1e-05 18.8 0.7 2 2 9.3e-06 0.00031 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_127 - 246 HTH_23 PF13384.1 50 2.1e-05 17.8 0.4 1 1 6.1e-07 2.1e-05 17.8 0.4 2 37 171 206 170 216 0.90 # 108486 # 109223 # -1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_113 - 394 HTH_23 PF13384.1 50 0.00021 14.6 0.2 1 1 4.3e-05 0.0015 11.9 0.0 4 35 122 154 119 161 0.81 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 1_122 - 102 HTH_23 PF13384.1 50 0.00064 13.1 0.0 1 1 3.8e-05 0.0013 12.1 0.0 15 40 31 56 25 65 0.79 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_119 - 226 HTH_23 PF13384.1 50 0.0015 11.9 0.2 1 1 0.00024 0.0082 9.5 0.0 10 35 22 51 14 64 0.75 # 101660 # 102337 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_127 - 246 HTH_7 PF02796.10 45 1.4e-07 25.0 0.1 1 1 1.9e-09 3.2e-07 23.8 0.1 8 44 173 209 168 210 0.87 # 108486 # 109223 # -1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_125 - 498 Ribosomal_S27e PF01667.12 55 0.00088 12.5 1.1 1 1 1.4e-05 0.0024 11.1 1.1 5 33 71 99 68 104 0.90 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_9 - 101 HTH_19 PF12844.2 64 6.1e-08 26.3 0.0 1 1 5.2e-10 8.8e-08 25.8 0.0 4 52 33 81 31 86 0.95 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_125 - 498 zinc_ribbon_4 PF13717.1 36 0.038 7.4 5.2 1 2 0.00049 0.083 6.3 0.1 2 14 73 85 73 87 0.84 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_125 - 498 zinc_ribbon_4 PF13717.1 36 0.038 7.4 5.2 2 2 0.0064 1.1 2.8 0.0 5 14 95 104 94 111 0.81 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 3_3 - 181 HTH_29 PF13551.1 112 0.00097 13.0 0.0 1 1 1.5e-05 0.0025 11.7 0.0 12 47 4 39 1 91 0.86 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_17 - 290 DNA_pol_A_exo1 PF01612.15 176 0.00032 13.8 0.2 1 1 1.3e-05 0.0023 11.1 0.2 9 96 93 202 85 272 0.75 # 15941 # 16810 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 3_1 - 492 ABC_tran_2 PF12848.2 85 1.1e-13 44.6 16.1 1 1 2e-14 3.3e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_1 - 235 DDE_Tnp_IS66 PF03050.9 271 3.9e-12 39.5 0.3 1 1 3e-14 5e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_3 - 181 IF2_N PF04760.10 54 0.00021 14.6 1.1 1 1 4.3e-06 0.00073 12.9 0.0 1 40 1 38 1 48 0.75 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_65 - 323 Arch_ATPase PF01637.13 234 7.1e-05 16.2 0.0 1 1 1.4e-06 0.00012 15.5 0.0 4 44 45 85 43 94 0.91 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 1 3 0.039 3.3 0.9 0.0 25 40 35 50 24 85 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 2 3 0.017 1.4 2.1 0.7 53 104 181 237 166 267 0.65 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Arch_ATPase PF01637.13 234 0.00018 14.9 3.0 3 3 6.5e-05 0.0055 10.0 0.0 24 68 326 374 323 473 0.69 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 PhoH PF02562.11 205 4.3e-06 19.7 0.2 1 2 0.0013 0.22 4.3 0.0 22 45 22 45 4 61 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 PhoH PF02562.11 205 4.3e-06 19.7 0.2 2 2 7.5e-06 0.0013 11.7 0.0 122 168 196 240 193 255 0.83 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 AAA_5 PF07728.9 139 1.6e-18 60.4 0.0 1 1 1.6e-20 2.7e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_12 - 504 ResIII PF04851.10 184 1.8e-06 21.5 0.0 1 1 5.5e-08 4.7e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_92 - 622 ResIII PF04851.10 184 0.00018 15.0 0.0 1 1 4.2e-06 0.00036 14.0 0.0 23 57 170 206 129 214 0.74 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_28 - 192 PAPS_reduct PF01507.14 174 5.1e-10 33.1 0.2 1 1 7.8e-12 6.6e-10 32.7 0.2 99 172 19 99 1 101 0.81 # 14392 # 14967 # 1 # ID=2_28;partial=00;start_type=TTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.516 1_42 - 818 PAPS_reduct PF01507.14 174 4.3e-05 17.0 0.0 1 1 2.1e-06 0.00017 15.0 0.0 3 151 69 256 67 261 0.69 # 33621 # 36074 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.522 1_92 - 622 TrwB_AAD_bind PF10412.4 386 3.3e-19 62.3 0.0 1 2 8.9e-13 7.5e-11 34.8 0.0 10 54 167 211 161 313 0.70 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 TrwB_AAD_bind PF10412.4 386 3.3e-19 62.3 0.0 2 2 6.9e-10 5.9e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 TrwB_AAD_bind PF10412.4 386 3.8e-08 25.9 0.0 1 2 1.5e-05 0.0012 11.1 0.0 6 72 442 517 438 520 0.85 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 TrwB_AAD_bind PF10412.4 386 3.8e-08 25.9 0.0 2 2 5.6e-06 0.00047 12.4 0.1 232 301 643 712 613 731 0.66 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_114 - 262 TIGR01968 TIGR01968 261 8.7e-09 28.4 0.1 1 2 5e-07 8.5e-05 15.3 0.1 2 39 3 41 2 45 0.84 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 TIGR01968 TIGR01968 261 8.7e-09 28.4 0.1 2 2 9e-06 0.0015 11.2 0.0 105 135 120 150 111 218 0.80 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_1 - 492 AAA_18 PF13238.1 129 0.0016 12.4 8.3 1 2 0.0015 0.26 5.3 0.0 1 21 33 53 33 89 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_18 PF13238.1 129 0.0016 12.4 8.3 2 2 3.5e-05 0.0058 10.6 0.6 1 23 325 354 325 475 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR00611 TIGR00611 365 0.0011 11.4 2.8 1 3 0.0032 0.55 2.6 0.0 27 41 34 48 20 55 0.82 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR00611 TIGR00611 365 0.0011 11.4 2.8 2 3 0.01 1.8 0.9 0.2 81 124 230 273 204 274 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR00611 TIGR00611 365 0.0011 11.4 2.8 3 3 0.0004 0.067 5.6 0.0 27 43 326 342 318 348 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF258 PF03193.11 161 1.3e-08 27.8 0.1 1 2 2e-07 3.4e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF258 PF03193.11 161 1.3e-08 27.8 0.1 2 2 6.4e-05 0.011 8.6 0.0 38 67 325 352 302 391 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_33 - 586 zf-CHC2 PF01807.15 98 0.001 12.3 0.0 1 1 1.2e-05 0.0021 11.3 0.0 35 94 50 111 40 115 0.75 # 27739 # 29496 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.531 1_17 - 290 TIGR01406 TIGR01406 231 1.8e-18 60.3 0.0 1 1 1.5e-20 2.6e-18 59.8 0.0 3 179 107 279 105 288 0.85 # 15941 # 16810 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_65 - 323 AAA_3 PF07726.6 131 0.00012 15.4 0.0 1 1 1.1e-06 0.00019 14.7 0.0 3 114 65 188 63 212 0.80 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_92 - 622 DUF87 PF01935.12 229 1.2e-08 28.6 0.1 1 1 5e-10 2.8e-08 27.5 0.1 24 63 173 211 168 379 0.87 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_77 - 816 DUF87 PF01935.12 229 4.6e-08 26.8 0.2 1 1 1.7e-09 9.5e-08 25.7 0.2 24 167 452 591 432 654 0.69 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 1 3 0.0038 0.22 4.9 0.0 25 48 32 55 20 62 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 2 3 0.003 0.17 5.3 0.3 25 46 324 345 321 357 0.88 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 DUF87 PF01935.12 229 0.023 8.1 11.6 3 3 0.027 1.5 2.2 0.1 40 196 415 472 368 486 0.56 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 4_1 - 235 HTH_28 PF13518.1 52 9.8e-05 16.0 1.2 1 1 7.6e-06 0.00043 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_3 - 181 HTH_28 PF13518.1 52 0.00015 15.4 0.0 1 1 4.6e-06 0.00026 14.7 0.0 14 46 5 38 1 44 0.85 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_127 - 246 HTH_28 PF13518.1 52 0.00053 13.7 0.7 1 1 9.4e-06 0.00053 13.7 0.7 1 33 175 207 175 209 0.95 # 108486 # 109223 # -1 # ID=1_127;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_119 - 226 HTH_Tnp_1_2 PF13022.1 142 0.0013 12.1 0.0 1 1 1.2e-05 0.002 11.6 0.0 22 77 24 73 5 79 0.76 # 101660 # 102337 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_122 - 102 HTH_24 PF13412.1 48 1.4e-06 21.3 0.0 1 1 5e-08 2.1e-06 20.7 0.0 16 44 32 60 22 60 0.86 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 5_2 - 66 HTH_24 PF13412.1 48 2.6e-05 17.3 0.0 1 1 9.3e-07 3.9e-05 16.7 0.0 4 45 17 60 15 61 0.93 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_112 - 91 HTH_24 PF13412.1 48 3e-05 17.0 0.1 1 1 1.1e-06 4.6e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_113 - 394 HTH_24 PF13412.1 48 3.2e-05 16.9 0.3 1 2 0.00064 0.027 7.6 0.2 1 29 104 131 104 131 0.90 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 1_113 - 394 HTH_24 PF13412.1 48 3.2e-05 16.9 0.3 2 2 0.00094 0.04 7.0 0.0 20 41 139 160 138 161 0.90 # 95803 # 96984 # -1 # ID=1_113;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=11-12bp;gc_cont=0.501 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 1 3 0.0039 0.65 3.0 0.0 3 26 452 475 450 503 0.86 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 2 3 0.012 2 1.4 0.0 76 115 597 637 591 703 0.82 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_77 - 816 Guanylate_kin PF00625.16 183 0.00027 14.0 0.1 3 3 0.001 0.18 4.9 0.0 75 131 714 770 697 777 0.87 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_122 - 102 HTH_30 PF13556.1 59 1.1e-05 18.6 0.1 1 1 1e-07 1.7e-05 18.0 0.1 10 44 31 65 24 75 0.88 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_17 - 290 TIGR01298 TIGR01298 200 3.1e-07 23.7 1.1 1 1 5.8e-08 9.7e-06 18.8 1.1 1 196 97 276 97 280 0.83 # 15941 # 16810 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 3_1 - 492 MMR_HSR1 PF01926.18 116 3.1e-06 20.8 4.1 1 2 2.2e-05 0.0037 10.9 0.1 1 27 32 92 32 178 0.52 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 MMR_HSR1 PF01926.18 116 3.1e-06 20.8 4.1 2 2 4.9e-05 0.0083 9.8 0.7 1 99 324 473 324 488 0.56 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_92 - 622 DEAD PF00270.24 169 3.9e-05 16.8 0.0 1 1 4.4e-07 7.4e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 Miro PF08477.8 119 6.3e-09 30.0 1.0 1 2 5.7e-06 0.00096 13.3 0.0 1 21 32 52 32 82 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Miro PF08477.8 119 6.3e-09 30.0 1.0 2 2 3.4e-06 0.00057 14.0 0.0 1 25 324 348 324 392 0.72 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 2_9 - 101 HTH_31 PF13560.1 64 1.6e-07 25.1 0.0 1 1 1.4e-09 2.3e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_12 - 504 UvrD_C_2 PF13538.1 104 1.3e-10 35.0 0.0 1 1 3.5e-12 5.9e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_65 - 323 T2SE PF00437.15 272 5.9e-05 15.7 0.0 1 1 1.6e-06 0.00014 14.5 0.0 105 148 40 81 9 100 0.77 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_92 - 622 T2SE PF00437.15 272 0.00031 13.3 0.0 1 1 5.9e-06 0.0005 12.6 0.0 116 162 163 206 124 227 0.78 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 NACHT PF05729.7 166 2.4e-06 20.9 0.1 1 2 0.00046 0.078 6.3 0.0 3 20 33 50 31 63 0.86 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 NACHT PF05729.7 166 2.4e-06 20.9 0.1 2 2 7.1e-06 0.0012 12.2 0.0 3 24 325 346 323 394 0.84 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 UPF0079 PF02367.12 123 0.00069 12.9 0.1 1 2 0.0017 0.3 4.4 0.0 18 36 33 51 26 60 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 UPF0079 PF02367.12 123 0.00069 12.9 0.1 2 2 0.00063 0.11 5.8 0.0 14 39 321 346 312 357 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_17 PF13207.1 121 1.5e-06 22.7 3.7 1 2 0.0046 0.39 5.2 0.4 1 20 32 51 32 195 0.85 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_17 PF13207.1 121 1.5e-06 22.7 3.7 2 2 6e-07 5.1e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_65 - 323 AAA_17 PF13207.1 121 4.3e-05 18.0 0.0 1 1 1.1e-06 9.3e-05 16.9 0.0 3 27 65 89 64 166 0.90 # 52429 # 53397 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_1 - 492 TIGR02211 TIGR02211 221 3.3e-30 98.6 2.1 1 4 3.1e-07 5.3e-05 16.1 0.0 18 53 17 52 4 67 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR02211 TIGR02211 221 3.3e-30 98.6 2.1 2 4 2e-14 3.3e-12 39.7 0.0 124 220 85 175 68 176 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR02211 TIGR02211 221 3.3e-30 98.6 2.1 3 4 1.1e-05 0.0018 11.1 0.0 19 52 310 343 305 358 0.90 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 TIGR02211 TIGR02211 221 3.3e-30 98.6 2.1 4 4 5.5e-11 9.3e-09 28.4 0.0 124 219 390 483 373 485 0.82 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_25 PF13481.1 194 3.4e-05 17.0 0.0 1 2 0.029 1.2 2.1 0.0 37 54 34 51 30 72 0.81 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_25 PF13481.1 194 3.4e-05 17.0 0.0 2 2 5.7e-05 0.0024 10.9 0.0 29 54 318 343 294 423 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_77 - 816 AAA_25 PF13481.1 194 0.00058 12.9 0.0 1 1 3.4e-05 0.0014 11.6 0.0 36 86 454 494 447 532 0.82 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_114 - 262 AAA_25 PF13481.1 194 0.00066 12.7 0.0 1 1 2.4e-05 0.001 12.1 0.0 42 91 12 51 11 134 0.78 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_92 - 622 AAA_25 PF13481.1 194 0.00066 12.7 0.0 1 1 4.9e-05 0.0021 11.1 0.0 20 137 159 265 145 272 0.78 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 1 3 1.4e-05 0.0024 11.0 0.0 2 49 23 73 22 87 0.67 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 2 3 1.8e-05 0.0031 10.7 0.0 56 105 188 234 146 256 0.78 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 Viral_helicase1 PF01443.13 234 1.5e-10 34.6 0.0 3 3 5.2e-05 0.0088 9.2 0.0 176 227 404 462 344 467 0.75 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 1 3 6e-05 0.01 8.5 0.0 26 54 34 58 5 119 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 2 3 6.4e-06 0.0011 11.7 0.0 26 90 326 383 300 417 0.60 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_15 PF13175.1 415 6.2e-10 32.2 1.2 3 3 3.8e-05 0.0065 9.1 0.1 352 414 415 467 393 476 0.75 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_12 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 1 2 2.5e-05 0.0043 10.6 0.1 11 46 28 62 18 156 0.76 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_12 - 504 AAA_14 PF13173.1 128 2.8e-05 17.7 1.3 2 2 0.0011 0.19 5.3 0.0 51 99 176 227 127 241 0.73 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_112 - 91 Mga PF05043.8 87 0.00043 14.2 0.1 1 1 3.1e-06 0.00053 13.9 0.1 17 55 9 47 2 62 0.89 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_63 - 176 AAA_33 PF13671.1 143 0.00096 12.7 0.0 1 1 1.7e-05 0.0014 12.1 0.0 26 102 33 104 23 109 0.75 # 50919 # 51446 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 3_1 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 1 2 0.017 1.4 2.4 0.0 4 19 35 50 33 121 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_33 PF13671.1 143 0.0011 12.5 0.1 2 2 0.00051 0.043 7.3 0.0 3 33 326 356 325 398 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_59 - 599 DUF2201_N PF13203.1 292 0.00014 14.7 14.7 1 2 0.0007 0.12 5.1 0.0 36 102 31 95 11 131 0.71 # 45404 # 47200 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_59 - 599 DUF2201_N PF13203.1 292 0.00014 14.7 14.7 2 2 2.7e-05 0.0046 9.7 11.9 116 240 173 327 162 341 0.51 # 45404 # 47200 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.533 1_92 - 622 ArgK PF03308.11 267 0.00018 13.9 0.0 1 1 1.8e-06 0.00031 13.2 0.0 12 68 158 209 153 214 0.88 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 2_10 - 98 PaaX PF07848.7 70 0.00017 15.2 0.0 1 1 1.4e-06 0.00024 14.8 0.0 19 70 28 79 10 79 0.88 # 4246 # 4539 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_92 - 622 T4SS-DNA_transf PF02534.9 469 4.3e-05 15.8 0.0 1 2 5.6e-07 9.4e-05 14.7 0.0 37 114 168 248 125 346 0.72 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 622 T4SS-DNA_transf PF02534.9 469 4.3e-05 15.8 0.0 2 2 0.097 16 -2.6 0.0 328 389 494 555 474 572 0.74 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 RNA_helicase PF00910.17 107 0.0011 12.8 0.2 1 2 0.0033 0.56 4.1 0.0 3 22 35 54 33 65 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 RNA_helicase PF00910.17 107 0.0011 12.8 0.2 2 2 0.00092 0.15 5.9 0.0 2 22 326 346 325 380 0.79 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 1 2 0.044 7.4 -0.1 0.0 1 19 32 50 32 62 0.83 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 NTPase_1 PF03266.10 168 0.00014 15.2 2.1 2 2 1.7e-05 0.0029 11.0 1.0 1 26 324 349 324 490 0.62 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_46 - 542 DNA_methylase PF00145.12 335 1e-28 94.0 0.0 1 1 6.3e-30 5.3e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 37901 # 39526 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.515 1_103 - 476 DNA_methylase PF00145.12 335 1.8e-10 34.1 0.0 1 2 4.1e-11 3.5e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 90184 # 91611 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_103 - 476 DNA_methylase PF00145.12 335 1.8e-10 34.1 0.0 2 2 0.011 0.94 2.1 0.0 290 330 407 448 343 452 0.74 # 90184 # 91611 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.533 1_125 - 498 zinc_ribbon_5 PF13719.1 37 0.0036 10.6 2.7 1 2 0.00031 0.053 6.8 0.0 2 14 73 85 72 87 0.83 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_125 - 498 zinc_ribbon_5 PF13719.1 37 0.0036 10.6 2.7 2 2 0.0048 0.82 3.0 0.0 5 14 95 104 94 113 0.81 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 4_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.3e-52 171.2 0.0 1 1 1.1e-54 1.8e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 1 3 8e-05 0.013 8.6 0.0 3 31 32 60 30 100 0.90 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 2 3 0.00051 0.086 6.0 0.1 3 23 324 344 322 352 0.89 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 PduV-EutP PF10662.4 143 4.3e-06 19.9 1.2 3 3 0.0082 1.4 2.1 0.0 40 72 431 463 420 484 0.69 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 KAP_NTPase PF07693.9 325 0.00035 13.2 1.8 1 2 0.00056 0.094 5.3 0.0 23 47 33 57 26 143 0.77 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 KAP_NTPase PF07693.9 325 0.00035 13.2 1.8 2 2 0.00018 0.03 6.9 0.0 23 42 325 344 319 398 0.87 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_3 - 181 HTH_17 PF12728.2 51 2.7e-06 21.2 0.0 1 1 3.1e-08 5.3e-06 20.3 0.0 2 27 4 29 4 37 0.92 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_96 - 731 Zn-ribbon_8 PF09723.5 42 0.011 9.3 6.9 1 2 0.0093 0.79 3.5 0.1 23 40 631 647 624 648 0.85 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_96 - 731 Zn-ribbon_8 PF09723.5 42 0.011 9.3 6.9 2 2 0.0012 0.1 6.3 3.4 20 38 676 693 657 696 0.81 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_125 - 498 Zn-ribbon_8 PF09723.5 42 0.064 7.0 9.5 1 2 0.001 0.087 6.5 5.2 7 35 75 101 75 105 0.89 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_125 - 498 Zn-ribbon_8 PF09723.5 42 0.064 7.0 9.5 2 2 0.033 2.8 1.7 0.1 25 37 439 450 430 459 0.71 # 106561 # 108054 # -1 # ID=1_125;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_33 - 586 Prim_Zn_Ribbon PF08273.7 40 5.8e-14 45.6 4.2 1 1 5.9e-16 1e-13 44.9 4.2 1 40 46 84 46 84 0.95 # 27739 # 29496 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.531 3_3 - 181 HTH_11 PF08279.7 55 0.0004 13.7 0.0 1 1 1.2e-05 0.0011 12.4 0.0 15 37 3 25 1 26 0.91 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_112 - 91 HTH_11 PF08279.7 55 0.0006 13.1 0.0 1 1 9.5e-06 0.0008 12.7 0.0 1 46 9 54 9 70 0.77 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 5_2 - 66 MarR_2 PF12802.2 62 1e-05 18.8 0.1 1 1 3e-07 1.7e-05 18.1 0.1 12 49 23 60 4 60 0.84 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_9 - 101 MarR_2 PF12802.2 62 1.2e-05 18.6 0.0 1 1 4.3e-07 2.4e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_122 - 102 MarR_2 PF12802.2 62 0.00013 15.2 0.1 1 1 3.3e-06 0.00018 14.8 0.1 22 47 34 59 22 80 0.86 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 5_2 - 66 HTH_5 PF01022.15 47 4.2e-10 32.8 0.2 1 1 7.5e-12 4.2e-10 32.8 0.2 1 43 15 60 15 60 0.93 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_112 - 91 HTH_5 PF01022.15 47 4.7e-06 19.9 0.0 1 1 1.2e-07 6.8e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_9 - 101 HTH_5 PF01022.15 47 0.00074 12.9 0.0 1 1 2.9e-05 0.0016 11.7 0.0 15 34 41 60 33 60 0.84 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 5_2 - 66 TrmB PF01978.14 68 0.00014 15.3 0.0 1 1 2.2e-06 0.00019 14.8 0.0 12 50 20 60 17 61 0.92 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_112 - 91 TrmB PF01978.14 68 0.0016 11.9 0.0 1 1 2.8e-05 0.0023 11.3 0.0 19 48 19 48 11 52 0.85 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_3 - 181 UPF0122 PF04297.9 101 4.9e-07 23.4 1.3 1 3 2e-08 3.4e-06 20.7 0.0 33 89 3 64 1 76 0.78 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 3_3 - 181 UPF0122 PF04297.9 101 4.9e-07 23.4 1.3 2 3 0.088 15 -0.6 0.4 55 79 74 99 62 121 0.55 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 3_3 - 181 UPF0122 PF04297.9 101 4.9e-07 23.4 1.3 3 3 0.03 5.1 0.9 0.3 44 83 94 134 83 156 0.66 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 2_9 - 101 HTH_Crp_2 PF13545.1 76 2.1e-05 17.9 0.0 1 1 2.1e-07 3.5e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 3917 # 4219 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_112 - 91 HTH_Mga PF08280.6 59 1.5e-06 21.6 0.0 1 1 1e-08 1.7e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 95482 # 95754 # -1 # ID=1_112;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 1 5 0.019 3.2 1.5 8.8 39 98 89 152 77 158 0.72 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 2 5 0.00084 0.14 5.9 3.1 50 100 146 196 143 199 0.89 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 3 5 2.6e-06 0.00044 13.9 12.2 19 100 216 294 201 297 0.85 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 4 5 0.00031 0.052 7.3 2.1 62 105 284 327 282 330 0.90 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 Seryl_tRNA_N PF02403.17 108 0.044 7.5 46.3 5 5 0.0059 0.99 3.1 1.6 82 105 304 327 296 345 0.51 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_17 - 290 RNase_T PF00929.19 164 6.6e-23 75.4 0.0 1 1 5.8e-25 9.8e-23 74.9 0.0 1 163 107 264 107 265 0.94 # 15941 # 16810 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_77 - 816 AAA_10 PF12846.2 304 4.5e-59 193.9 0.1 1 1 1.4e-60 7.6e-59 193.2 0.1 1 296 451 729 451 738 0.93 # 63056 # 65503 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_92 - 622 AAA_10 PF12846.2 304 1.6e-18 60.8 0.2 1 1 8e-20 4.5e-18 59.3 0.2 2 299 173 549 172 553 0.71 # 79709 # 81574 # -1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 492 AAA_10 PF12846.2 304 7.4e-05 15.9 4.7 1 2 0.002 0.12 5.4 0.0 6 22 35 51 33 67 0.80 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 AAA_10 PF12846.2 304 7.4e-05 15.9 4.7 2 2 5.1e-05 0.0029 10.7 0.5 4 118 325 478 322 489 0.76 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 5_2 - 66 HTH_20 PF12840.2 61 3.2e-15 49.4 0.5 1 1 7e-17 3.9e-15 49.1 0.5 3 52 9 60 5 60 0.94 # 371 # 568 # 1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_122 - 102 HTH_20 PF12840.2 61 2.2e-06 21.1 0.1 1 1 7e-08 4e-06 20.3 0.1 16 59 25 69 21 71 0.87 # 103882 # 104187 # -1 # ID=1_122;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_119 - 226 HTH_20 PF12840.2 61 0.00041 13.8 0.1 1 1 5.4e-05 0.003 11.0 0.0 21 46 30 55 18 63 0.85 # 101660 # 102337 # -1 # ID=1_119;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 3_1 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 1 2 0.0077 1.3 2.4 11.6 1 86 33 234 33 305 0.68 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 3_1 - 492 Dynamin_N PF00350.18 168 0.018 8.5 17.3 2 2 0.00049 0.083 6.3 0.3 1 111 325 437 325 487 0.51 # 525 # 2000 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.400 1_106 - 169 DnaJ_CXXCXGXG PF00684.14 66 0.00013 15.7 2.0 1 1 2.5e-06 0.00042 14.0 2.0 1 31 6 37 6 48 0.74 # 92441 # 92947 # -1 # ID=1_106;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.544 1_12 - 504 UvrD_C PF13361.1 351 1.5e-10 34.6 0.0 1 1 1.7e-12 2.9e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_14 - 347 AAA_13 PF13166.1 712 0.011 7.7 36.6 1 2 0.0019 0.32 2.9 28.3 283 457 85 259 71 272 0.58 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_14 - 347 AAA_13 PF13166.1 712 0.011 7.7 36.6 2 2 2.3e-05 0.004 9.2 23.2 287 474 160 339 154 345 0.78 # 13049 # 14089 # -1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_114 - 262 ArsA_ATPase PF02374.10 305 9.7e-06 18.4 0.0 1 2 3e-07 5.1e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 ArsA_ATPase PF02374.10 305 9.7e-06 18.4 0.0 2 2 0.029 4.9 -0.3 0.0 124 136 124 136 106 143 0.79 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_114 - 262 AAA_31 PF13614.1 157 2.2e-10 34.3 0.0 1 1 2.6e-12 4.5e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 96988 # 97773 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_116 - 272 Pterin_bind PF00809.17 210 4.8e-60 196.1 0.0 1 1 3.4e-62 5.7e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 98565 # 99380 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 1_12 - 504 AAA_11 PF13086.1 236 4.9e-07 23.2 0.1 1 1 1.9e-08 3.2e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 11251 # 12762 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_63 - 176 SSB PF00436.20 104 2.1e-41 133.7 0.3 1 1 1.5e-43 2.6e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 50919 # 51446 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.544 3_3 - 181 Phage_AlpA PF05930.7 51 0.00069 13.0 0.0 1 1 7.6e-06 0.0013 12.1 0.0 4 28 4 28 1 30 0.90 # 3313 # 3855 # -1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.376 1_96 - 731 Zn_ribbon_recom PF13408.1 58 8e-06 19.7 8.2 1 2 0.00033 0.055 7.5 0.7 8 40 637 668 636 680 0.71 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_96 - 731 Zn_ribbon_recom PF13408.1 58 8e-06 19.7 8.2 2 2 1.1e-06 0.00018 15.4 1.4 8 41 685 719 685 728 0.80 # 85549 # 87741 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/bfabe44e-3ad0-40d9-acae-0385f357a0b3 # Target file: checkm_output/bins/pm1863/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1863/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/bfabe44e-3ad0-40d9-acae-0385f357a0b3 checkm_output/bins/pm1863/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:54:04 2017 # [ok]