#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_2                  -            139 HTH_IclR             PF09339.5     52   7.4e-06   13.0   0.0   1   1   1.1e-05   2.1e-05   11.6   0.0    22    46    77   101    59   103 0.90 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 MarR                 PF01047.17    59     1e-07   19.1   0.3   1   1   1.4e-07   2.8e-07   17.7   0.1    15    47    71   103    51   103 0.79 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 HTH_27               PF13463.1     68   2.5e-09   24.9   0.0   1   1     2e-09     4e-09   24.2   0.0    13    64    63   117    51   119 0.81 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 RepL                 PF05732.6    165   2.1e-06   14.4   0.2   1   1   1.2e-06   2.4e-06   14.2   0.2    50   130    49   132     6   136 0.69 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 HTH_24               PF13412.1     48   1.9e-07   17.9   0.0   1   1     2e-07   4.1e-07   16.8   0.0    18    47    74   103    73   103 0.95 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 MarR_2               PF12802.2     62   5.3e-10   26.4   0.0   1   1   4.2e-10   8.5e-10   25.7   0.0     3    51    51   103    49   114 0.85 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 TrmB                 PF01978.14    68   8.9e-07   16.1   0.0   1   1   1.3e-06   2.5e-06   14.6   0.0    26    56    77   107    73   119 0.82 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 HTH_Crp_2            PF13545.1     76   6.6e-07   16.6   0.0   1   1   5.7e-07   1.1e-06   15.8   0.0    26    58    71   103    58   115 0.85 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
1_2                  -            139 HTH_20               PF12840.2     61     5e-06   13.8   0.0   1   1   6.1e-06   1.2e-05   12.5   0.0    29    54    78   103    77   105 0.95 # 927 # 1343 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453
#
# Program:         hmmsearch
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SEARCH
# Query file:      /tmp/c1263d69-54f8-45c6-9307-adfa2a5ceb31
# Target file:     checkm_output/bins/pm1849/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm1849/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c1263d69-54f8-45c6-9307-adfa2a5ceb31 checkm_output/bins/pm1849/genes.faa 
# Current dir:     /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887
# Date:            Thu Nov 30 09:53:30 2017
# [ok]