# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 235 rve PF00665.21 120 3.6e-14 42.7 0.1 1 2 0.015 0.16 1.9 0.0 78 102 27 49 6 54 0.84 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 rve PF00665.21 120 3.6e-14 42.7 0.1 2 2 6.1e-14 6.7e-13 38.7 0.0 9 119 75 182 70 183 0.89 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 HTH_Tnp_1 PF01527.15 76 2.7e-05 13.9 0.3 1 1 5.4e-06 5.9e-05 12.9 0.3 4 51 6 58 4 63 0.79 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 DDE_3 PF13358.1 146 7.5e-05 12.3 0.0 1 1 2.1e-05 0.00023 10.7 0.0 32 90 82 141 59 146 0.87 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_5 - 308 DDE_Tnp_1 PF01609.16 213 2.5e-25 79.0 0.8 1 1 3e-26 3.3e-25 78.6 0.8 4 205 115 286 112 293 0.88 # 4500 # 5423 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_9 - 676 zf-C4_Topoisom PF01396.14 39 5.3e-09 25.4 4.3 1 1 1e-09 1.1e-08 24.3 4.3 3 35 628 661 626 664 0.86 # 7173 # 9200 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 1_2 - 235 HTH_32 PF13565.1 77 1.4e-07 22.1 0.2 1 1 5.6e-08 6.2e-07 20.0 0.0 26 76 5 50 2 51 0.83 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 HTH_23 PF13384.1 50 6.7e-07 18.8 0.7 1 2 0.016 0.17 1.6 0.0 7 27 11 35 7 36 0.69 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 HTH_23 PF13384.1 50 6.7e-07 18.8 0.7 2 2 1.9e-06 2e-05 14.0 0.1 28 42 41 55 40 62 0.87 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 DDE_Tnp_IS66 PF03050.9 271 2.6e-13 39.5 0.3 1 1 3e-14 3.3e-13 39.2 0.3 5 132 10 144 6 174 0.87 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 HTH_28 PF13518.1 52 6.4e-06 16.0 1.2 1 1 2.5e-06 2.8e-05 14.0 1.2 22 36 40 54 13 55 0.76 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 235 DDE_Tnp_IS240 PF13610.1 140 8.4e-54 171.2 0.0 1 1 1.1e-54 1.2e-53 170.7 0.0 4 139 75 212 73 213 0.99 # 1663 # 2367 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_5 - 308 DDE_Tnp_1_5 PF13737.1 112 1.5e-49 156.7 0.0 1 2 2.2e-49 2.4e-48 152.8 0.0 1 112 19 130 19 130 0.96 # 4500 # 5423 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_5 - 308 DDE_Tnp_1_5 PF13737.1 112 1.5e-49 156.7 0.0 2 2 0.031 0.35 0.9 0.0 42 68 263 291 234 297 0.82 # 4500 # 5423 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_9 - 676 Zn_ribbon_recom PF13408.1 58 1.2e-05 15.4 3.5 1 1 3.9e-06 4.3e-05 13.6 3.5 5 40 626 657 623 664 0.85 # 7173 # 9200 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.455 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/94ae8aad-6820-45bb-875a-5b5530daad68 # Target file: checkm_output/bins/pm1845/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1845/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/94ae8aad-6820-45bb-875a-5b5530daad68 checkm_output/bins/pm1845/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:53:29 2017 # [ok]