# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 343 ABC_tran PF00005.22 137 4.8e-06 19.0 0.0 1 1 1.8e-07 9.8e-06 18.0 0.0 5 45 161 201 158 223 0.83 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 FtsK_SpoIIIE PF01580.13 205 2.3e-06 19.2 0.0 1 1 3.4e-07 9.2e-06 17.3 0.0 7 59 135 188 130 194 0.77 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_21 - 916 FtsK_SpoIIIE PF01580.13 205 7.1e-06 17.6 0.0 1 1 4.8e-07 1.3e-05 16.8 0.0 36 70 532 566 521 568 0.89 # 10631 # 13378 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_16 - 89 HTH_40 PF14493.1 91 0.00013 14.3 0.0 1 1 3.3e-06 0.00018 13.8 0.0 9 36 31 58 23 75 0.86 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_28 - 343 MobB PF03205.9 140 6e-05 14.8 0.1 1 2 1.6e-05 0.00042 12.1 0.0 2 24 169 191 168 205 0.83 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 MobB PF03205.9 140 6e-05 14.8 0.1 2 2 0.078 2.1 0.1 0.0 79 102 299 324 252 341 0.61 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 2_4 - 220 MobB PF03205.9 140 0.00017 13.4 0.3 1 1 9e-06 0.00024 12.8 0.3 1 44 3 45 3 86 0.91 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_22 - 239 TBPIP PF07106.8 169 0.00036 12.1 11.7 1 2 5.9e-05 0.0032 9.1 0.1 83 142 39 99 32 120 0.84 # 13390 # 14106 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_22 - 239 TBPIP PF07106.8 169 0.00036 12.1 11.7 2 2 0.00066 0.036 5.6 7.0 86 156 150 223 140 232 0.79 # 13390 # 14106 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_4 - 117 HTH_8 PF02954.14 42 9e-06 17.3 0.5 1 1 3.2e-07 1.7e-05 16.4 0.5 12 39 61 87 57 88 0.83 # 1906 # 2256 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 2_4 - 220 CbiA PF01656.18 195 2.8e-20 64.5 0.0 1 1 7e-22 3.8e-20 64.1 0.0 1 184 5 172 5 186 0.81 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_16 - 89 Sigma70_r4_2 PF08281.7 54 3.6e-06 18.5 0.0 1 1 1.1e-07 5.8e-06 17.8 0.0 10 52 20 61 19 63 0.92 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 2_11 - 335 Rep_3 PF01051.16 222 4.8e-54 175.3 3.6 1 1 1.1e-55 6.1e-54 174.9 3.6 4 222 16 246 13 246 0.88 # 5566 # 6570 # -1 # ID=2_11;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.368 1_16 - 89 Ub-RnfH PF03658.9 84 0.00032 12.6 0.1 1 2 0.0001 0.0056 8.6 0.0 26 47 3 24 1 33 0.87 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_16 - 89 Ub-RnfH PF03658.9 84 0.00032 12.6 0.1 2 2 0.0066 0.36 2.9 0.0 22 50 34 64 23 67 0.71 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 4_1 - 235 rve PF00665.21 120 1.8e-13 42.8 0.1 1 2 0.015 0.8 1.9 0.0 78 102 27 49 6 54 0.84 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 4_1 - 235 rve PF00665.21 120 1.8e-13 42.8 0.1 2 2 6.1e-14 3.3e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_4 - 220 YhjQ PF06564.7 244 0.00013 13.4 0.0 1 2 0.0018 0.096 4.0 0.1 3 26 4 27 2 39 0.82 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 YhjQ PF06564.7 244 0.00013 13.4 0.0 2 2 0.00017 0.0093 7.3 0.0 108 154 73 117 50 127 0.82 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_28 - 343 Zeta_toxin PF06414.7 201 0.00023 12.3 0.0 1 1 7.4e-06 0.0004 11.5 0.0 17 60 168 214 157 244 0.82 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 AAA_30 PF13604.1 196 0.0006 11.4 0.4 1 1 3e-05 0.0016 10.1 0.1 10 41 159 190 152 200 0.76 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_10 - 117 ATPgrasp_Ter PF15632.1 330 0.00041 11.1 0.0 1 1 9.1e-06 0.00049 10.9 0.0 128 174 50 97 33 110 0.89 # 5368 # 5718 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.362 4_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00013 14.0 0.3 1 1 5.4e-06 0.00029 12.9 0.3 4 51 6 58 4 63 0.79 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_16 - 89 GerE PF00196.14 58 1.9e-07 22.4 0.1 1 1 5.4e-09 2.9e-07 21.8 0.1 3 40 20 57 18 62 0.92 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_29 - 606 TraG-D_C PF12696.2 128 3.8e-25 80.3 0.0 1 1 1.2e-26 6.5e-25 79.5 0.0 2 127 407 526 406 527 0.91 # 19491 # 21308 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 4_1 - 235 DDE_3 PF13358.1 146 0.00037 12.3 0.0 1 1 2.1e-05 0.0011 10.7 0.0 32 90 82 141 59 146 0.87 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_4 - 220 MipZ PF09140.6 261 5.5e-13 40.6 0.1 1 1 5.2e-12 2.8e-10 31.7 0.1 2 129 4 111 3 187 0.84 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_16 - 89 Sigma70_r4 PF04545.11 50 0.00024 12.5 0.3 1 1 8.1e-06 0.00044 11.7 0.0 4 34 20 49 19 53 0.90 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_37 - 718 zf-C4_Topoisom PF01396.14 39 0.0007 11.2 1.3 1 1 2.7e-05 0.0015 10.2 1.3 4 21 635 650 632 661 0.78 # 24296 # 26449 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.459 2_4 - 220 cobW PF02492.14 178 0.0001 13.8 0.0 1 1 6.5e-06 0.00035 12.1 0.0 53 102 24 99 4 171 0.74 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_28 - 343 AAA_16 PF13191.1 185 0.00023 13.2 0.0 1 2 5.9e-05 0.0032 9.5 0.0 21 51 166 194 150 239 0.83 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 AAA_16 PF13191.1 185 0.00023 13.2 0.0 2 2 0.018 0.96 1.4 0.0 33 80 265 315 264 334 0.78 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_21 - 916 AAA_22 PF13401.1 131 3.2e-05 16.1 0.0 1 2 1.6e-05 0.00085 11.5 0.0 8 37 538 578 535 699 0.66 # 10631 # 13378 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 916 AAA_22 PF13401.1 131 3.2e-05 16.1 0.0 2 2 0.018 1 1.6 0.0 75 109 740 778 737 794 0.72 # 10631 # 13378 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_28 - 343 AAA_29 PF13555.1 62 8.1e-05 14.2 0.1 1 1 3.9e-06 0.00021 12.9 0.1 22 41 166 185 158 191 0.84 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 4_1 - 235 HTH_32 PF13565.1 77 6.9e-07 22.1 0.2 1 1 5.6e-08 3e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_35 - 135 A2L_zn_ribbon PF08792.5 33 0.0025 9.4 7.4 1 1 8.8e-05 0.0048 8.5 7.4 6 28 88 109 86 113 0.88 # 23206 # 23610 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.368 1_4 - 117 HTH_3 PF01381.17 55 0.00012 13.9 0.1 1 1 4.1e-06 0.00022 13.1 0.1 9 49 68 106 59 111 0.81 # 1906 # 2256 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 4_1 - 235 HTH_23 PF13384.1 50 4.2e-06 18.4 0.5 1 2 0.016 0.85 1.6 0.0 7 27 11 35 7 36 0.69 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 4_1 - 235 HTH_23 PF13384.1 50 4.2e-06 18.4 0.5 2 2 1.9e-06 0.0001 14.0 0.1 28 42 41 55 40 62 0.87 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_4 - 117 HTH_7 PF02796.10 45 0.00044 12.2 0.1 1 1 1.8e-05 0.00099 11.1 0.0 24 43 69 88 60 90 0.88 # 1906 # 2256 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_8 - 76 HTH_19 PF12844.2 64 0.0002 13.5 0.2 1 1 5e-06 0.00027 13.1 0.2 2 20 8 26 7 55 0.79 # 4293 # 4520 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.364 1_28 - 343 Mg_chelatase PF01078.16 207 6.5e-06 17.4 0.1 1 2 4.7e-07 2.5e-05 15.5 0.0 13 56 158 201 147 252 0.83 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 Mg_chelatase PF01078.16 207 6.5e-06 17.4 0.1 2 2 0.057 3.1 -1.1 0.0 169 200 290 321 278 325 0.80 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 4_1 - 235 DDE_Tnp_IS66 PF03050.9 271 1.4e-12 39.3 0.6 1 1 3.7e-14 2e-12 38.9 0.4 5 131 10 143 6 158 0.86 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_28 - 343 ResIII PF04851.10 184 0.00028 12.7 0.0 1 1 8.7e-06 0.00047 12.0 0.0 24 46 166 188 128 217 0.77 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_29 - 606 TrwB_AAD_bind PF10412.4 386 1.3e-17 55.4 0.0 1 1 8.5e-19 2.3e-17 54.6 0.0 165 380 322 540 305 542 0.81 # 19491 # 21308 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 1_28 - 343 TrwB_AAD_bind PF10412.4 386 8.7e-05 13.2 0.0 1 1 5.3e-06 0.00014 12.5 0.0 16 40 168 192 160 214 0.85 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 2_4 - 220 TIGR01968 TIGR01968 261 5.2e-08 24.2 1.1 1 2 6.9e-07 3.7e-05 14.9 0.5 2 39 3 40 2 48 0.94 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 TIGR01968 TIGR01968 261 5.2e-08 24.2 1.1 2 2 8.4e-05 0.0045 8.0 0.0 102 142 71 111 67 121 0.84 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_35 - 135 zf-CHC2 PF01807.15 98 0.00047 11.8 2.0 1 1 8.8e-06 0.00047 11.8 0.6 41 65 89 113 78 127 0.88 # 23206 # 23610 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.368 4_1 - 235 HTH_28 PF13518.1 52 3.1e-05 16.0 1.2 1 1 5.1e-06 0.00014 14.0 1.2 22 36 40 54 13 55 0.76 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_4 - 117 HTH_28 PF13518.1 52 0.00018 13.6 0.3 1 1 1.1e-05 0.0003 12.9 0.3 5 33 58 87 56 88 0.87 # 1906 # 2256 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 3_1 - 350 TIGR00048 TIGR00048 355 4.2e-86 280.7 0.1 1 1 9.3e-88 5e-86 280.5 0.1 16 343 11 342 4 349 0.92 # 548 # 1597 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.329 1_16 - 89 HTH_10 PF04967.7 53 0.00021 13.0 0.0 1 2 0.055 3 -0.4 0.0 1 8 21 28 21 30 0.84 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_16 - 89 HTH_10 PF04967.7 53 0.00021 13.0 0.0 2 2 2.3e-05 0.0012 10.5 0.0 24 48 36 60 35 64 0.89 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_28 - 343 T2SE PF00437.15 272 3.5e-63 205.0 0.0 1 1 7.5e-65 4e-63 204.8 0.0 3 270 20 322 18 324 0.96 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 NACHT PF05729.7 166 0.00024 12.8 0.0 1 1 2.2e-05 0.0006 11.5 0.0 2 22 169 189 168 195 0.91 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_21 - 916 NACHT PF05729.7 166 0.00025 12.8 0.0 1 1 2.3e-05 0.00062 11.5 0.0 5 29 539 563 537 568 0.85 # 10631 # 13378 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_28 - 343 UPF0079 PF02367.12 123 0.00012 13.8 0.1 1 1 3.8e-06 0.00021 13.0 0.1 10 37 162 189 153 199 0.82 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 AAA_17 PF13207.1 121 0.00021 14.2 0.3 1 1 1.7e-05 0.00094 12.1 0.1 2 19 170 187 169 220 0.80 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_35 - 135 DZR PF12773.2 50 0.00015 13.7 3.0 1 1 4e-06 0.00022 13.1 3.0 2 41 76 114 75 118 0.85 # 23206 # 23610 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.368 2_4 - 220 AAA_25 PF13481.1 194 0.00017 13.0 0.0 1 1 9.9e-06 0.00027 12.4 0.0 34 62 3 33 1 61 0.77 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_28 - 343 AAA_25 PF13481.1 194 0.0002 12.8 0.1 1 1 1.6e-05 0.00043 11.7 0.1 31 54 165 188 158 199 0.90 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 Viral_helicase1 PF01443.13 234 0.00036 12.1 0.0 1 1 1.4e-05 0.00076 11.0 0.0 1 25 170 193 170 223 0.78 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 Pox_A32 PF04665.7 241 3.6e-05 15.2 0.0 1 1 1e-06 5.5e-05 14.6 0.0 16 67 170 218 161 247 0.73 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 AAA_14 PF13173.1 128 0.00036 12.5 0.0 1 1 1.3e-05 0.00073 11.5 0.0 2 47 167 210 166 261 0.81 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 2_4 - 220 VirC1 PF07015.6 231 1.8e-08 25.7 0.0 1 1 5.9e-10 3.2e-08 24.9 0.0 2 96 3 93 2 111 0.77 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 ArgK PF03308.11 267 0.00047 11.0 0.0 1 2 0.00035 0.019 5.7 0.2 31 66 4 40 2 46 0.80 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 ArgK PF03308.11 267 0.00047 11.0 0.0 2 2 0.0022 0.12 3.1 0.0 119 168 78 128 71 172 0.85 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_29 - 606 T4SS-DNA_transf PF02534.9 469 5.5e-96 313.9 0.0 1 1 1.4e-97 7.4e-96 313.5 0.0 45 452 132 553 86 574 0.87 # 19491 # 21308 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 1_14 - 166 TIGR00420 TIGR00420 351 0.00023 11.8 0.1 1 1 5.6e-06 0.0003 11.4 0.1 246 322 25 104 17 120 0.84 # 6985 # 7482 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.369 1_28 - 343 ATP_bind_1 PF03029.12 238 3.2e-05 15.6 0.0 1 1 1.1e-06 5.7e-05 14.7 0.0 2 25 173 196 172 205 0.87 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 4_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.2e-53 172.9 0.1 1 1 3e-55 1.6e-53 172.5 0.1 4 139 75 212 73 213 0.99 # 64 # 768 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.528 1_37 - 718 Toprim_Crpt PF13342.1 62 5.4e-19 59.7 3.8 1 1 1.2e-20 6.5e-19 59.5 2.5 1 60 652 711 652 713 0.92 # 24296 # 26449 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.459 1_16 - 89 Sigma70_ECF PF07638.6 185 0.00012 13.8 0.0 1 1 2.6e-06 0.00014 13.6 0.0 138 176 22 60 6 68 0.84 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_16 - 89 UPF0122 PF04297.9 101 0.00011 14.3 0.0 1 1 2.6e-06 0.00014 13.9 0.0 4 58 6 60 3 65 0.82 # 8792 # 9058 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.408 1_21 - 916 AAA_10 PF12846.2 304 1.3e-32 105.5 0.0 1 1 7.7e-34 2.1e-32 104.7 0.0 3 303 536 834 535 835 0.88 # 10631 # 13378 # 1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.399 1_28 - 343 AAA_10 PF12846.2 304 0.00023 12.6 0.0 1 2 0.057 1.5 0.1 0.0 119 154 119 153 58 166 0.72 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_28 - 343 AAA_10 PF12846.2 304 0.00023 12.6 0.0 2 2 5.3e-05 0.0014 10.1 0.0 4 23 170 189 167 204 0.85 # 18431 # 19459 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 2_4 - 220 ArsA_ATPase PF02374.10 305 4.2e-07 21.2 0.3 1 1 1.3e-08 7.2e-07 20.5 0.1 2 52 3 54 2 66 0.88 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 AAA_31 PF13614.1 157 7.3e-08 24.5 0.0 1 2 1.8e-05 0.001 11.1 0.0 1 61 3 63 3 70 0.86 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 AAA_31 PF13614.1 157 7.3e-08 24.5 0.0 2 2 1.4e-05 0.00075 11.5 0.0 112 151 75 113 67 115 0.87 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_4 - 220 IstB_IS21 PF01695.12 178 0.00061 11.3 0.0 1 1 1.7e-05 0.0009 10.7 0.0 52 84 7 40 2 60 0.85 # 2508 # 3167 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.473 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/6ce9dc25-ca11-4764-bf8b-848667e17315 # Target file: checkm_output/bins/pm184/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm184/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/6ce9dc25-ca11-4764-bf8b-848667e17315 checkm_output/bins/pm184/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:53:22 2017 # [ok]