# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 517 HMGL-like PF00682.14 237 2e-93 301.5 0.4 1 1 4e-94 2.8e-93 301.0 0.4 1 236 13 251 13 252 0.99 # 3174 # 4724 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.277 1_5 - 255 Homeobox PF00046.24 57 1e-05 14.4 0.0 1 2 0.00015 0.0011 7.9 0.0 15 40 83 108 70 110 0.86 # 4855 # 5619 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.246 1_5 - 255 Homeobox PF00046.24 57 1e-05 14.4 0.0 2 2 0.0028 0.02 3.8 0.0 31 48 178 195 169 199 0.87 # 4855 # 5619 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.246 1_4 - 517 Trp_syntA PF00290.15 259 7.4e-06 13.7 0.0 1 1 2.3e-06 1.6e-05 12.6 0.0 23 50 25 52 20 69 0.90 # 3174 # 4724 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.277 1_2 - 467 TIGR02211 TIGR02211 221 4e-05 12.0 0.1 1 1 1.1e-05 7.5e-05 11.1 0.1 16 84 153 223 144 227 0.84 # 646 # 2046 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.298 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/576d024b-22a3-4454-93e3-0d94dbd3ada8 # Target file: checkm_output/bins/pm1800/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1800/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/576d024b-22a3-4454-93e3-0d94dbd3ada8 checkm_output/bins/pm1800/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:52:29 2017 # [ok]