# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 137 HTH_IclR PF09339.5 52 1.6e-05 14.1 0.3 1 1 4.2e-06 3.8e-05 12.8 0.3 20 40 5 25 2 26 0.91 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_1 - 137 MerR_1 PF13411.1 69 6.1e-05 12.3 0.1 1 2 2.6e-05 0.00023 10.5 0.0 2 29 5 32 4 51 0.85 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_1 - 137 MerR_1 PF13411.1 69 6.1e-05 12.3 0.1 2 2 0.091 0.82 -0.9 0.0 41 57 100 116 86 126 0.70 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_1 - 137 HTH_23 PF13384.1 50 3e-05 13.2 0.0 1 1 7.4e-06 6.6e-05 12.1 0.0 18 40 4 26 1 28 0.92 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_7 - 299 DUF4095 PF13338.1 124 5.9e-11 32.1 0.0 1 3 0.065 0.59 -0.1 0.0 37 61 15 40 6 65 0.79 # 4433 # 5329 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.338 1_7 - 299 DUF4095 PF13338.1 124 5.9e-11 32.1 0.0 2 3 6.4e-09 5.7e-08 22.5 0.0 33 72 91 130 68 148 0.77 # 4433 # 5329 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.338 1_7 - 299 DUF4095 PF13338.1 124 5.9e-11 32.1 0.0 3 3 0.00086 0.0077 5.9 0.0 68 124 154 205 145 205 0.73 # 4433 # 5329 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.338 1_1 - 137 MerR PF00376.18 38 2.5e-05 13.4 0.0 1 1 4.9e-06 4.4e-05 12.6 0.0 1 25 5 29 5 32 0.92 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 1_1 - 137 HTH_17 PF12728.2 51 4.8e-08 22.8 0.0 1 1 1.3e-08 1.1e-07 21.6 0.0 3 32 5 36 4 50 0.77 # 695 # 1105 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.453 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/1beb748e-6f50-47f2-bcd5-cfd465699bf8 # Target file: checkm_output/bins/pm1796/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1796/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1beb748e-6f50-47f2-bcd5-cfd465699bf8 checkm_output/bins/pm1796/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:52:19 2017 # [ok]