# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 89 HTH_19 PF12844.2 64 4.5e-05 12.9 0.0 1 1 7.8e-06 6.3e-05 12.4 0.0 27 60 9 43 2 47 0.88 # 1386 # 1652 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 1_2 - 122 HTH_17 PF12728.2 51 8.6e-06 15.4 0.6 1 1 3.4e-06 2.7e-05 13.8 0.0 1 30 3 31 3 50 0.75 # 957 # 1322 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.514 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/cf4f3752-9fbb-455b-8b23-00da845dfe6b # Target file: checkm_output/bins/pm1783/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1783/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/cf4f3752-9fbb-455b-8b23-00da845dfe6b checkm_output/bins/pm1783/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:51:52 2017 # [ok]