# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 380 HTH_3 PF01381.17 55 1.6e-13 38.3 0.0 1 1 1.3e-13 3.9e-13 37.2 0.0 1 51 9 62 9 64 0.92 # 1082 # 2221 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.368 1_2 - 380 HTH_19 PF12844.2 64 2e-10 28.7 0.0 1 1 1.6e-10 4.9e-10 27.4 0.0 3 46 8 54 6 63 0.91 # 1082 # 2221 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.368 1_2 - 380 HTH_31 PF13560.1 64 9e-11 29.9 0.0 1 1 5.1e-11 1.5e-10 29.2 0.0 3 52 6 57 4 63 0.87 # 1082 # 2221 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.368 1_2 - 380 DNA_methylase PF00145.12 335 5.5e-113 365.3 0.2 1 1 2.3e-113 6.8e-113 365.0 0.2 1 334 72 374 72 375 0.97 # 1082 # 2221 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.368 1_1 - 306 TIGR01510 TIGR01510 155 1.8e-05 12.4 0.5 1 1 1.2e-05 3.5e-05 11.5 0.5 27 100 223 296 216 302 0.90 # 55 # 972 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.329 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/42622aa6-f3af-484d-a09b-f4a0668ebe12 # Target file: checkm_output/bins/pm177/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm177/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/42622aa6-f3af-484d-a09b-f4a0668ebe12 checkm_output/bins/pm177/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:51:36 2017 # [ok]