# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_55 - 388 KaiC PF06745.8 227 0.00091 11.4 0.0 1 1 1.5e-05 0.0016 10.6 0.0 14 59 147 191 137 201 0.76 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_55 - 388 ABC_tran PF00005.22 137 0.00015 15.1 0.0 1 1 2.7e-06 0.00029 14.2 0.0 16 33 157 174 149 217 0.83 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_2 - 211 TIGR01173 TIGR01173 452 4.8e-10 31.5 0.1 1 1 6.4e-12 7e-10 30.9 0.1 390 446 109 165 100 170 0.87 # 427 # 1059 # -1 # ID=5_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.493 1_55 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.8 0.0 1 1 1.9e-06 0.00021 13.8 0.0 41 59 155 173 129 184 0.85 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 Cytidylate_kin2 PF13189.1 179 0.0005 13.0 0.0 1 2 6.6e-05 0.0071 9.3 0.0 1 23 2 24 2 46 0.78 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 Cytidylate_kin2 PF13189.1 179 0.0005 13.0 0.0 2 2 0.015 1.6 1.6 0.0 112 135 99 122 91 136 0.77 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_55 - 388 MobB PF03205.9 140 0.00054 12.7 0.0 1 1 1e-05 0.0011 11.7 0.0 4 25 156 177 154 190 0.85 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_4 - 102 HTH_34 PF13601.1 80 5.1e-10 32.4 0.1 1 1 6.6e-12 7.1e-10 31.9 0.1 25 79 39 93 30 94 0.92 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_4 - 102 MarR PF01047.17 59 4.8e-05 16.1 0.0 1 1 6.2e-07 6.7e-05 15.6 0.0 29 58 40 69 13 70 0.92 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 4_1 - 108 HTH_8 PF02954.14 42 6.9e-10 31.4 0.2 1 1 1.8e-11 9.8e-10 30.9 0.2 6 41 69 104 65 105 0.92 # 1 # 324 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 1_19 - 83 HTH_8 PF02954.14 42 1.1e-05 18.0 0.1 1 1 3.6e-07 1.9e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_7 - 195 TetR_N PF00440.18 47 3.5e-08 26.0 0.0 1 1 6.3e-10 6.8e-08 25.1 0.0 2 46 13 57 12 58 0.95 # 4922 # 5506 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.607 2_11 - 181 AAA_19 PF13245.1 76 0.00025 13.8 0.0 1 1 1.6e-05 0.00088 12.1 0.0 15 33 5 22 2 38 0.84 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_68 - 1017 AAA_19 PF13245.1 76 0.00055 12.7 0.0 1 1 3.2e-05 0.0017 11.1 0.0 14 31 492 508 481 518 0.90 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 3_4 - 102 PadR PF03551.9 75 6.3e-23 73.4 0.5 1 1 8e-25 8.7e-23 73.0 0.5 1 74 15 84 15 85 0.97 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_5 - 255 rve PF00665.21 120 1.2e-13 44.3 0.0 1 2 0.041 2.2 1.5 0.0 83 102 30 49 7 51 0.90 # 3665 # 4429 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 3_5 - 255 rve PF00665.21 120 1.2e-13 44.3 0.0 2 2 3.4e-14 1.8e-12 40.5 0.0 8 117 73 179 69 182 0.90 # 3665 # 4429 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 7_1 - 235 rve PF00665.21 120 1.9e-13 43.6 0.1 1 2 0.03 1.6 1.9 0.0 78 102 27 49 6 54 0.84 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 7_1 - 235 rve PF00665.21 120 1.9e-13 43.6 0.1 2 2 6.3e-14 3.4e-12 39.6 0.0 9 119 75 182 70 183 0.89 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 4_5 - 514 zf-ribbon_3 PF13248.1 26 0.061 5.7 9.1 1 2 9.1e-05 0.0098 8.2 0.9 18 24 95 101 93 108 0.74 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 zf-ribbon_3 PF13248.1 26 0.061 5.7 9.1 2 2 0.0085 0.92 1.9 0.1 18 23 449 454 446 457 0.83 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_55 - 388 AAA_23 PF13476.1 202 2.1e-06 21.2 0.1 1 1 4.2e-08 4.5e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_6 - 283 TIGR00573 TIGR00573 217 2.1e-13 42.9 0.1 1 1 1.4e-14 1.5e-12 40.2 0.1 12 178 107 271 103 281 0.71 # 3402 # 4250 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.628 2_11 - 181 AAA_24 PF13479.1 213 7.7e-05 15.3 0.0 1 1 1.4e-06 0.00015 14.4 0.0 6 33 3 34 1 73 0.90 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 Zeta_toxin PF06414.7 201 4.9e-05 15.5 0.0 1 2 4.7e-06 0.00051 12.2 0.0 19 53 3 35 1 120 0.83 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 Zeta_toxin PF06414.7 201 4.9e-05 15.5 0.0 2 2 0.024 2.6 0.1 0.0 45 74 106 133 95 150 0.73 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_55 - 388 SMC_N PF02463.14 220 0.0013 11.0 0.0 1 1 2.1e-05 0.0023 10.2 0.0 26 50 154 178 147 195 0.81 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_6 - 170 HTH_Tnp_1 PF01527.15 76 0.0001 15.3 0.1 1 1 6.6e-06 0.00036 13.5 0.1 10 48 124 165 122 168 0.76 # 5368 # 5877 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 7_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00027 13.9 0.3 1 1 1.1e-05 0.00058 12.9 0.3 4 51 6 58 4 63 0.79 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_5 - 696 TraG-D_C PF12696.2 128 0.00015 14.7 0.1 1 1 2.4e-06 0.00026 13.9 0.1 3 94 437 524 435 556 0.78 # 3233 # 5320 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 7_1 - 235 DDE_3 PF13358.1 146 0.00047 13.0 0.0 1 1 1.3e-05 0.0014 11.4 0.0 32 90 82 141 59 146 0.87 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_11 - 181 TIGR03263 TIGR03263 180 0.00078 11.8 0.0 1 1 1.6e-05 0.0017 10.7 0.0 3 26 2 25 1 31 0.81 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_8 - 457 DDE_Tnp_1 PF01609.16 213 6.2e-16 51.5 0.2 1 1 9.9e-18 1.1e-15 50.8 0.2 4 213 140 441 138 441 0.88 # 8227 # 9597 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.589 1_13 - 425 ACT PF01842.20 66 4e-05 16.1 0.5 1 3 0.039 4.2 0.1 0.0 13 27 232 246 231 246 0.91 # 6870 # 8144 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_13 - 425 ACT PF01842.20 66 4e-05 16.1 0.5 2 3 1.3e-05 0.0014 11.2 0.0 7 27 319 339 316 339 0.93 # 6870 # 8144 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 1_13 - 425 ACT PF01842.20 66 4e-05 16.1 0.5 3 3 0.056 6 -0.4 0.0 30 59 365 392 363 394 0.75 # 6870 # 8144 # -1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.598 3_4 - 102 Replic_Relax PF13814.1 191 3.7e-05 16.6 0.1 1 1 3.9e-07 4.2e-05 16.5 0.1 16 77 31 90 17 96 0.85 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_19 - 83 HTH_37 PF13744.1 80 4.6e-05 16.2 0.0 1 1 1.8e-06 9.5e-05 15.2 0.0 24 54 7 37 4 46 0.89 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_12 - 91 HTH_37 PF13744.1 80 0.00042 13.2 0.0 1 1 1.1e-05 0.0006 12.7 0.0 25 53 22 50 19 54 0.92 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_24 - 325 Hydantoinase_A PF01968.13 290 1.2e-07 24.1 3.6 1 2 5.2e-07 5.6e-05 15.3 0.1 67 96 158 186 140 193 0.83 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 325 Hydantoinase_A PF01968.13 290 1.2e-07 24.1 3.6 2 2 3.1e-05 0.0034 9.5 0.1 212 265 248 301 191 322 0.76 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_11 - 181 cobW PF02492.14 178 0.00091 11.7 0.0 1 1 1.3e-05 0.0014 11.1 0.0 2 22 2 22 1 30 0.79 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_55 - 388 AAA_16 PF13191.1 185 0.00095 12.2 0.0 1 1 1.8e-05 0.0019 11.2 0.0 26 50 154 178 140 211 0.85 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_55 - 388 AAA_22 PF13401.1 131 3.1e-06 20.4 0.0 1 1 2.1e-07 7.7e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 AAA_22 PF13401.1 131 1.8e-05 17.9 0.0 1 1 9.9e-07 3.6e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_68 - 1017 AAA_22 PF13401.1 131 0.00021 14.4 0.0 1 1 2e-05 0.00072 12.7 0.0 8 73 492 561 486 594 0.70 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_36 - 287 Methyltransf_27 PF13708.1 194 2.1e-69 225.9 0.0 1 1 3.3e-71 3.5e-69 225.2 0.0 2 194 89 282 88 282 0.98 # 21522 # 22382 # 1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_4 - 102 DUF3116 PF11313.3 85 0.00044 12.9 0.1 1 1 5.7e-06 0.00062 12.4 0.1 49 83 50 88 39 90 0.75 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_55 - 388 AAA_29 PF13555.1 62 9.6e-06 18.1 0.1 1 1 2.2e-07 2.4e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_6 - 170 Limkain-b1 PF11608.3 91 0.00051 12.8 0.1 1 1 8.7e-06 0.00094 12.0 0.1 16 70 90 144 80 151 0.89 # 5368 # 5877 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 2_11 - 181 AAA_28 PF13521.1 163 0.00015 14.8 0.0 1 1 2.9e-06 0.00032 13.7 0.0 2 30 3 34 2 165 0.89 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 7_1 - 235 HTH_32 PF13565.1 77 1.4e-06 22.1 0.2 1 1 1.1e-07 6.1e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_5 - 255 HTH_32 PF13565.1 77 0.00021 15.1 0.2 1 1 1.3e-05 0.00072 13.4 0.2 37 76 15 50 6 51 0.83 # 3665 # 4429 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 4_5 - 514 A2L_zn_ribbon PF08792.5 33 0.0072 8.9 4.7 1 2 0.00018 0.02 7.5 0.6 5 29 76 101 74 102 0.90 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 A2L_zn_ribbon PF08792.5 33 0.0072 8.9 4.7 2 2 0.0078 0.85 2.3 0.3 20 28 446 454 444 457 0.62 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_19 - 83 HTH_3 PF01381.17 55 2e-09 30.2 0.1 1 1 1.2e-10 3.4e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_33 - 89 HTH_3 PF01381.17 55 1.2e-06 21.4 0.0 1 1 5.6e-08 1.5e-06 21.0 0.0 8 36 41 69 33 78 0.88 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_12 - 91 HTH_3 PF01381.17 55 3.4e-05 16.7 0.0 1 1 1.9e-06 5.2e-05 16.1 0.0 2 32 21 51 21 55 0.90 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_28 - 160 HTH_3 PF01381.17 55 0.00015 14.6 0.1 1 2 0.0029 0.078 5.9 0.0 2 20 15 33 14 37 0.91 # 16752 # 17231 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 160 HTH_3 PF01381.17 55 0.00015 14.6 0.1 2 2 0.0022 0.059 6.3 0.0 1 23 96 118 96 120 0.89 # 16752 # 17231 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_12 - 91 HTH_23 PF13384.1 50 4.7e-06 19.2 0.1 1 1 4.2e-07 7.6e-06 18.6 0.1 12 38 23 49 19 54 0.85 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 7_1 - 235 HTH_23 PF13384.1 50 6.6e-06 18.8 0.7 1 2 0.095 1.7 1.6 0.0 7 27 11 35 7 36 0.69 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 7_1 - 235 HTH_23 PF13384.1 50 6.6e-06 18.8 0.7 2 2 1.1e-05 0.0002 14.0 0.1 28 42 41 55 40 62 0.87 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_33 - 89 HTH_23 PF13384.1 50 7.6e-06 18.6 0.0 1 1 6.4e-07 1.1e-05 18.0 0.0 16 39 38 64 33 68 0.83 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_6 - 170 HTH_23 PF13384.1 50 1.7e-05 17.4 0.1 1 1 2.2e-06 3.9e-05 16.3 0.1 4 40 123 163 121 167 0.91 # 5368 # 5877 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 1_19 - 83 HTH_23 PF13384.1 50 4.8e-05 16.0 0.0 1 1 5.2e-06 9.4e-05 15.1 0.0 15 34 10 31 6 40 0.81 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 4_1 - 108 HTH_23 PF13384.1 50 0.00073 12.3 0.0 1 1 6.5e-05 0.0012 11.6 0.0 16 40 79 104 68 106 0.87 # 1 # 324 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.491 4_5 - 514 Ribosomal_S27e PF01667.12 55 9.2e-05 15.0 0.8 1 1 8.6e-07 9.2e-05 15.0 0.8 5 33 72 100 69 105 0.90 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_19 - 83 HTH_19 PF12844.2 64 4.3e-08 26.2 0.0 1 1 1.7e-09 6.2e-08 25.7 0.0 8 45 10 47 8 56 0.86 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_12 - 91 HTH_19 PF12844.2 64 1.1e-05 18.5 0.0 1 1 4.1e-07 1.5e-05 18.1 0.0 5 35 21 51 21 60 0.91 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_33 - 89 HTH_19 PF12844.2 64 9.1e-05 15.5 0.0 1 1 3.4e-06 0.00012 15.1 0.0 4 39 33 69 30 73 0.85 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 4_5 - 514 zinc_ribbon_4 PF13717.1 36 0.0061 9.3 4.0 1 2 0.00044 0.047 6.5 0.1 1 12 73 84 73 87 0.82 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 zinc_ribbon_4 PF13717.1 36 0.0061 9.3 4.0 2 2 0.0063 0.68 2.8 0.0 5 14 96 105 95 113 0.81 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_4 - 102 FeoC PF09012.5 69 0.001 11.8 0.0 1 1 1.4e-05 0.0015 11.3 0.0 24 48 38 62 30 72 0.81 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 5_5 - 247 TIGR03413 TIGR03413 248 2.7e-08 26.2 0.0 1 1 3.1e-10 3.4e-08 25.8 0.0 28 150 72 200 54 231 0.79 # 2399 # 3139 # -1 # ID=5_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.382 7_1 - 235 DDE_Tnp_IS66 PF03050.9 271 1.2e-12 40.6 0.3 1 1 2.7e-14 1.5e-12 40.3 0.3 5 132 10 144 6 174 0.87 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 3_5 - 255 DDE_Tnp_IS66 PF03050.9 271 1.2e-09 30.7 0.4 1 1 3.4e-11 1.8e-09 30.2 0.4 11 133 16 144 8 183 0.86 # 3665 # 4429 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 2_5 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 1 3 1.7e-05 0.0019 9.8 0.0 16 36 134 154 125 158 0.88 # 3233 # 5320 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 2_5 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 2 3 9.3e-05 0.01 7.4 0.1 93 140 235 281 229 303 0.80 # 3233 # 5320 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 2_5 - 696 TrwB_AAD_bind PF10412.4 386 2e-06 19.6 0.9 3 3 0.083 8.9 -2.3 0.0 293 323 482 512 405 546 0.58 # 3233 # 5320 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 2_11 - 181 AAA_18 PF13238.1 129 7.3e-11 35.5 0.0 1 1 2.4e-12 1.3e-10 34.7 0.0 1 126 3 134 3 137 0.71 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_68 - 1017 AAA_18 PF13238.1 129 9.2e-05 15.8 1.3 1 1 7.1e-06 0.00038 13.8 0.0 2 19 492 509 492 571 0.76 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_5 - 435 IMS_HHH PF11798.3 32 0.00054 13.1 0.0 1 1 1.5e-05 0.0016 11.6 0.0 12 32 192 212 182 212 0.83 # 2075 # 3379 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.598 2_8 - 457 DDE_Tnp_1_6 PF13751.1 125 6.5e-32 103.2 3.9 1 1 9.2e-34 9.9e-32 102.6 3.9 1 125 319 445 319 445 0.92 # 8227 # 9597 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.589 1_6 - 283 TIGR01406 TIGR01406 231 2.1e-14 46.3 0.0 1 1 4e-16 4.4e-14 45.3 0.0 4 128 106 223 104 281 0.73 # 3402 # 4250 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.628 1_55 - 388 DUF87 PF01935.12 229 9.9e-05 15.2 0.0 1 1 1.8e-06 0.0002 14.2 0.0 28 45 157 174 155 188 0.89 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_6 - 170 HTH_28 PF13518.1 52 3.1e-06 20.2 0.5 1 1 2.3e-07 6.3e-06 19.2 0.1 2 37 126 165 125 167 0.90 # 5368 # 5877 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.524 7_1 - 235 HTH_28 PF13518.1 52 6.3e-05 16.0 1.2 1 1 1e-05 0.00027 14.0 1.2 22 36 40 54 13 55 0.76 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_33 - 89 HTH_28 PF13518.1 52 6.7e-05 15.9 0.0 1 1 3.5e-06 9.4e-05 15.4 0.0 7 34 34 64 33 68 0.82 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_19 - 83 HTH_28 PF13518.1 52 0.00045 13.3 0.1 1 1 3.6e-05 0.00098 12.2 0.1 8 29 8 31 6 35 0.78 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_4 - 102 HTH_12 PF08461.5 66 2.9e-06 20.0 0.7 1 1 4.3e-08 4.7e-06 19.3 0.7 6 65 15 82 12 83 0.77 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_4 - 102 FUR PF01475.14 120 2.2e-05 17.4 0.0 1 1 2.1e-07 2.3e-05 17.4 0.0 29 74 29 77 12 99 0.79 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_6 - 283 TIGR01298 TIGR01298 200 4.3e-05 16.0 1.2 1 1 2.5e-06 0.00027 13.4 1.2 104 189 178 267 92 274 0.73 # 3402 # 4250 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.628 1_55 - 388 Miro PF08477.8 119 0.001 12.6 0.0 1 1 2.1e-05 0.0023 11.5 0.0 4 28 157 186 156 220 0.72 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_19 - 83 HTH_31 PF13560.1 64 2.1e-09 30.6 0.9 1 1 9.9e-11 2.7e-09 30.2 0.9 9 56 9 55 6 72 0.90 # 11611 # 11859 # 1 # ID=1_19;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_12 - 91 HTH_31 PF13560.1 64 1.7e-07 24.4 0.5 1 1 1.1e-08 3e-07 23.6 0.5 7 36 21 50 6 65 0.90 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_28 - 160 HTH_31 PF13560.1 64 7.3e-07 22.4 1.2 1 2 0.0047 0.13 5.6 0.0 6 33 14 41 12 48 0.88 # 16752 # 17231 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_28 - 160 HTH_31 PF13560.1 64 7.3e-07 22.4 1.2 2 2 3.7e-06 0.0001 15.6 0.3 4 39 94 129 91 135 0.88 # 16752 # 17231 # 1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.546 1_33 - 89 HTH_31 PF13560.1 64 2.2e-06 20.9 0.0 1 1 1.1e-07 3e-06 20.4 0.0 2 42 29 69 28 80 0.84 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_68 - 1017 DUF2075 PF09848.4 352 0.00038 12.5 0.0 1 1 1.1e-05 0.0012 10.8 0.0 5 22 492 509 489 537 0.87 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 1_55 - 388 T2SE PF00437.15 272 3.1e-23 75.0 0.0 1 1 4.6e-25 5e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_24 - 325 StbA PF06406.6 318 3.5e-157 515.2 0.2 1 1 3.7e-159 4e-157 515.1 0.2 1 318 1 322 1 322 0.99 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 2_11 - 181 NACHT PF05729.7 166 1.7e-05 17.6 0.0 1 2 1.5e-06 8.3e-05 15.3 0.0 2 22 2 22 1 37 0.89 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 NACHT PF05729.7 166 1.7e-05 17.6 0.0 2 2 0.091 4.9 -0.2 0.0 77 91 151 177 95 179 0.61 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_55 - 388 NACHT PF05729.7 166 0.00036 13.2 0.0 1 1 1.3e-05 0.00071 12.3 0.0 4 29 156 181 154 188 0.83 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 UPF0079 PF02367.12 123 0.00022 13.9 0.0 1 1 3.3e-06 0.00036 13.2 0.0 17 36 2 21 1 30 0.88 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 AAA_17 PF13207.1 121 6.6e-07 23.2 0.1 1 1 2.3e-08 1.3e-06 22.3 0.1 1 77 2 94 2 173 0.54 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_68 - 1017 AAA_17 PF13207.1 121 5.4e-05 17.0 0.1 1 1 8.5e-06 0.00046 14.0 0.0 3 27 492 522 492 581 0.72 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 4_5 - 514 DZR PF12773.2 50 0.0064 9.4 4.8 1 2 0.0017 0.18 4.8 3.4 1 20 77 101 64 109 0.61 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 DZR PF12773.2 50 0.0064 9.4 4.8 2 2 0.0053 0.58 3.1 0.0 13 23 448 458 441 487 0.75 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_55 - 388 AAA_25 PF13481.1 194 6.2e-06 18.7 0.0 1 1 1.3e-07 1.4e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 AAA_14 PF13173.1 128 0.00064 12.7 0.0 1 1 1.1e-05 0.0012 11.7 0.0 4 27 2 25 1 54 0.79 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_24 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 1 4 0.08 8.6 -1.2 0.0 1 19 2 20 2 48 0.82 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 2 4 0.049 5.3 -0.5 0.0 108 154 38 86 15 103 0.67 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 3 4 0.057 6.1 -0.7 0.0 95 129 113 147 89 153 0.76 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_24 - 325 Hydant_A_N PF05378.8 176 0.0011 11.5 3.9 4 4 3.6e-05 0.0039 9.7 0.2 2 51 170 217 169 226 0.82 # 14154 # 15128 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 3_4 - 102 Penicillinase_R PF03965.11 115 2.7e-05 17.3 0.0 1 1 2.8e-07 3.1e-05 17.1 0.0 22 58 28 67 13 99 0.81 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_2 - 335 Transposase_20 PF02371.11 87 1.1e-24 79.4 0.2 1 1 2.3e-26 2.5e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 685 # 1689 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 1_33 - 89 HTH_Tnp_ISL3 PF13542.1 52 0.0004 12.6 0.0 1 1 5e-06 0.00054 12.2 0.0 19 49 35 64 33 65 0.91 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 2_11 - 181 AAA_33 PF13671.1 143 6.2e-11 35.4 0.0 1 1 7.3e-13 7.9e-11 35.0 0.0 2 127 3 130 2 151 0.75 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_33 - 89 CENP-B_N PF04218.8 53 0.0015 11.0 0.0 1 1 1.9e-05 0.002 10.6 0.0 24 49 44 69 34 72 0.88 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_55 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.7 0.1 1 2 0.00091 0.098 5.5 0.0 26 45 84 103 76 114 0.83 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_55 - 388 Ribosomal_S5 PF00333.15 67 3.3e-05 16.7 0.1 2 2 0.00012 0.013 8.4 0.0 21 54 242 274 230 278 0.91 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 RNA_helicase PF00910.17 107 0.00062 13.0 0.0 1 1 1.8e-05 0.00098 12.3 0.0 1 26 3 28 3 47 0.84 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 1_55 - 388 RNA_helicase PF00910.17 107 0.0012 12.1 0.0 1 1 4.9e-05 0.0027 10.9 0.0 3 26 157 180 156 197 0.81 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_11 - 181 APS_kinase PF01583.15 157 1.5e-05 17.7 0.0 1 2 7.3e-06 0.00079 12.1 0.0 4 24 2 22 1 35 0.87 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 2_11 - 181 APS_kinase PF01583.15 157 1.5e-05 17.7 0.0 2 2 0.0032 0.35 3.5 0.1 34 73 107 148 95 160 0.86 # 11823 # 12365 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.569 4_5 - 514 zinc_ribbon_5 PF13719.1 37 0.0048 9.6 3.9 1 2 0.0004 0.043 6.5 0.1 1 12 73 84 73 87 0.82 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 zinc_ribbon_5 PF13719.1 37 0.0048 9.6 3.9 2 2 0.0051 0.55 3.0 0.0 5 14 96 105 95 113 0.81 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 1_12 - 91 Mor PF08765.6 108 0.00043 13.1 0.0 1 1 5e-06 0.00054 12.8 0.0 71 93 27 49 18 57 0.85 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_33 - 89 Phage_CII PF05269.6 91 0.00078 12.5 0.0 1 1 9.2e-06 0.00099 12.2 0.0 17 45 36 64 32 81 0.83 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_55 - 388 ATP_bind_1 PF03029.12 238 0.00088 11.8 0.0 1 1 1.3e-05 0.0014 11.2 0.0 1 25 157 181 157 191 0.84 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 3_5 - 255 DDE_Tnp_IS240 PF13610.1 140 1.1e-53 174.0 0.0 1 1 3.9e-55 1.4e-53 173.6 0.0 3 139 73 211 71 212 0.98 # 3665 # 4429 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 7_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.9e-52 170.0 0.0 1 1 7.2e-54 2.6e-52 169.5 0.0 4 139 75 212 73 213 0.99 # 191 # 895 # 1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_59 - 66 DDE_Tnp_IS240 PF13610.1 140 0.00028 13.9 0.0 1 1 8.4e-06 0.0003 13.8 0.0 29 64 18 52 5 58 0.83 # 37422 # 37619 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.449 1_12 - 91 HTH_26 PF13443.1 63 0.00014 15.1 0.0 1 1 4.2e-06 0.00023 14.4 0.0 4 34 22 52 21 56 0.91 # 6580 # 6852 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 1_33 - 89 HTH_26 PF13443.1 63 0.00029 14.1 0.0 1 1 7.2e-06 0.00039 13.7 0.0 11 47 43 78 33 82 0.90 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 4_5 - 514 Zn-ribbon_8 PF09723.5 42 0.0003 13.8 7.4 1 2 0.00023 0.025 7.6 5.0 7 35 76 102 75 106 0.81 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 4_5 - 514 Zn-ribbon_8 PF09723.5 42 0.0003 13.8 7.4 2 2 0.00078 0.085 5.9 0.0 8 24 450 466 437 470 0.75 # 2865 # 4406 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.555 3_4 - 102 TrmB PF01978.14 68 0.00027 13.7 0.1 1 1 7.3e-06 0.00079 12.2 0.1 34 62 40 73 31 78 0.84 # 3133 # 3438 # 1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_9 - 302 LYTB PF02401.13 281 0.00074 11.5 0.0 1 1 2e-05 0.0021 9.9 0.0 236 272 81 117 70 124 0.91 # 6741 # 7646 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_33 - 89 HTH_Crp_2 PF13545.1 76 0.00049 12.9 0.0 1 1 6.6e-06 0.00071 12.4 0.0 26 50 40 64 32 65 0.88 # 19051 # 19317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.573 1_6 - 283 RNase_T PF00929.19 164 8.3e-22 71.2 0.0 1 1 9.8e-24 1.1e-21 70.9 0.0 1 163 105 262 105 263 0.94 # 3402 # 4250 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.628 1_68 - 1017 AAA_10 PF12846.2 304 9.4e-41 133.1 0.0 1 1 5.5e-42 2e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 43531 # 46581 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.471 2_5 - 696 AAA_10 PF12846.2 304 6.8e-10 31.8 0.0 1 1 2.8e-11 1e-09 31.2 0.0 2 292 134 503 133 514 0.76 # 3233 # 5320 # 1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_55 - 388 AAA_10 PF12846.2 304 1.6e-06 20.8 0.0 1 1 2.5e-07 8.9e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 6_1 - 280 Pterin_bind PF00809.17 210 2.8e-58 189.7 0.0 1 1 3e-60 3.3e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 25 # 864 # -1 # ID=6_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_46 - 145 SSB PF00436.20 104 3.6e-32 103.4 0.2 1 1 3.8e-34 4.1e-32 103.2 0.2 2 103 7 111 6 112 0.96 # 26050 # 26484 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_55 - 388 GTP_EFTU PF00009.22 188 0.0012 11.4 0.0 1 1 2e-05 0.0021 10.5 0.0 8 34 157 183 155 195 0.87 # 32248 # 33411 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ec018d07-ef2a-4e52-8eed-aec14ab24713 # Target file: checkm_output/bins/pm1767/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1767/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ec018d07-ef2a-4e52-8eed-aec14ab24713 checkm_output/bins/pm1767/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:51:34 2017 # [ok]