# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 99 DUF3173 PF11372.3 59 6.2e-06 15.5 0.2 1 2 4.1e-05 0.00041 9.7 0.0 8 25 21 38 19 46 0.90 # 2087 # 2383 # 1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.532 1_5 - 99 DUF3173 PF11372.3 59 6.2e-06 15.5 0.2 2 2 0.0023 0.023 4.1 0.1 13 33 58 78 52 94 0.81 # 2087 # 2383 # 1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 130 NmrA PF05368.8 233 2.6e-06 16.4 0.5 1 2 1.7e-05 0.00017 10.5 0.1 188 228 45 85 22 91 0.90 # 923 # 1312 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 1_2 - 130 NmrA PF05368.8 233 2.6e-06 16.4 0.5 2 2 0.0011 0.011 4.6 0.0 196 223 102 129 91 129 0.86 # 923 # 1312 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.310 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/3ab0da1d-1909-4271-910a-1f5e2fea23e0 # Target file: checkm_output/bins/pm1757/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1757/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3ab0da1d-1909-4271-910a-1f5e2fea23e0 checkm_output/bins/pm1757/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:51:12 2017 # [ok]