# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 239 rve PF00665.21 120 1.7e-14 42.7 0.1 1 2 0.015 0.074 1.9 0.0 78 102 31 53 9 58 0.83 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 rve PF00665.21 120 1.7e-14 42.7 0.1 2 2 6.3e-14 3.2e-13 38.6 0.0 9 119 79 186 74 187 0.89 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 HTH_Tnp_1 PF01527.15 76 1.3e-05 13.9 0.3 1 1 5.5e-06 2.8e-05 12.8 0.3 4 51 10 62 8 67 0.79 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 DDE_3 PF13358.1 146 3.5e-05 12.3 0.0 1 1 2.1e-05 0.00011 10.7 0.0 32 90 86 145 63 150 0.87 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 HTH_32 PF13565.1 77 4.9e-08 22.5 0.2 1 1 4e-08 2e-07 20.5 0.0 26 76 9 54 2 55 0.83 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 HTH_23 PF13384.1 50 3.2e-07 18.7 0.7 1 2 0.016 0.081 1.5 0.0 7 27 15 39 11 40 0.69 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 HTH_23 PF13384.1 50 3.2e-07 18.7 0.7 2 2 1.9e-06 9.5e-06 14.0 0.1 28 42 45 59 44 66 0.87 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 DDE_Tnp_IS66 PF03050.9 271 1.2e-13 39.5 0.3 1 1 3.1e-14 1.6e-13 39.1 0.3 5 132 14 148 10 178 0.87 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 HTH_28 PF13518.1 52 2.8e-06 16.1 1.1 1 1 2.4e-06 1.2e-05 14.0 1.1 22 36 44 58 17 59 0.76 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_2 - 239 DDE_Tnp_IS240 PF13610.1 140 4e-54 171.1 0.0 1 1 1.1e-54 5.5e-54 170.6 0.0 4 139 79 216 77 217 0.99 # 1734 # 2450 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 1 3 0.0037 0.019 3.8 0.1 39 104 220 286 199 290 0.90 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 2 3 0.0012 0.0059 5.4 0.1 27 59 317 349 305 370 0.85 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 Seryl_tRNA_N PF02403.17 108 3.7e-05 12.5 8.8 3 3 0.00084 0.0042 5.9 1.7 17 107 389 478 383 479 0.75 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 AAA_13 PF13166.1 712 0.00012 9.2 17.4 1 2 2.2e-05 0.00011 9.3 2.9 365 468 244 349 195 369 0.54 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 1_1 - 519 AAA_13 PF13166.1 712 0.00012 9.2 17.4 2 2 0.00059 0.0029 4.6 8.3 322 439 385 512 342 518 0.75 # 165 # 1721 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.477 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/eaea1c28-3c63-4a31-9f1b-d70efeeebdfa # Target file: checkm_output/bins/pm1751/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1751/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/eaea1c28-3c63-4a31-9f1b-d70efeeebdfa checkm_output/bins/pm1751/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:51:07 2017 # [ok]