# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 298 HTH_8 PF02954.14 42 4.7e-05 11.9 0.2 1 1 3.4e-05 0.0002 9.9 0.1 27 40 277 290 276 290 0.93 # 135 # 1028 # -1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=11-12bp;gc_cont=0.540 1_4 - 557 KOW PF00467.24 32 2.4e-05 13.0 0.1 1 1 1.1e-05 6.8e-05 11.6 0.1 1 26 518 538 518 548 0.90 # 2117 # 3787 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.464 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/f0544b02-a8b6-41b5-8056-1fca91dfb6ef # Target file: checkm_output/bins/pm1722/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1722/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f0544b02-a8b6-41b5-8056-1fca91dfb6ef checkm_output/bins/pm1722/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:50:26 2017 # [ok]