# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_33 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 18.2 0.0 1 2 0.00027 0.034 6.8 0.0 112 168 18 76 9 83 0.68 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 Cons_hypoth95 PF03602.10 183 1.1e-05 18.2 0.0 2 2 3.9e-05 0.005 9.5 0.0 41 62 162 183 142 218 0.78 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_84 - 241 ABC_tran PF00005.22 137 8.1e-05 16.2 0.0 1 1 2.1e-06 0.00014 15.5 0.0 16 35 20 39 11 79 0.87 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 ABC_tran PF00005.22 137 9.7e-05 16.0 0.0 1 1 5.3e-06 0.00035 14.2 0.0 12 37 226 251 217 288 0.81 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_33 - 228 TIGR00095 TIGR00095 194 0.0004 13.0 0.0 1 2 0.0015 0.19 4.3 0.0 123 138 19 34 8 79 0.74 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 TIGR00095 TIGR00095 194 0.0004 13.0 0.0 2 2 0.00024 0.032 6.8 0.0 53 86 164 199 155 218 0.77 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_28 - 425 HHH_5 PF14520.1 60 0.0013 12.3 0.0 1 1 2.6e-05 0.0033 10.9 0.0 9 37 184 212 172 229 0.92 # 20974 # 22248 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 4_1 - 74 HTH_Tnp_Tc3_2 PF01498.13 72 0.00035 13.9 0.0 1 1 7.8e-06 0.0005 13.4 0.0 14 40 26 52 14 64 0.89 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_Tnp_Tc3_2 PF01498.13 72 0.00035 13.9 0.0 1 1 7.8e-06 0.0005 13.4 0.0 14 40 26 52 14 64 0.89 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_6 - 41 HTH_38 PF13936.1 44 0.00039 13.3 0.0 1 1 1.2e-05 0.00052 12.9 0.0 30 43 7 20 4 21 0.91 # 2792 # 2914 # 1 # ID=3_6;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_1 - 74 HTH_38 PF13936.1 44 0.00058 12.7 0.0 1 1 3e-05 0.0013 11.6 0.0 30 43 40 53 25 54 0.94 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_38 PF13936.1 44 0.00058 12.7 0.0 1 1 3e-05 0.0013 11.6 0.0 30 43 40 53 25 54 0.94 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_84 - 241 MobB PF03205.9 140 0.00012 15.1 0.0 1 1 1.7e-06 0.00022 14.2 0.0 5 26 20 41 18 52 0.90 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_47 - 199 TilS_C PF11734.3 74 0.00035 13.1 0.0 1 1 6.3e-06 0.00082 11.9 0.0 29 45 7 23 6 28 0.88 # 35461 # 36057 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 2_7 - 195 TetR_N PF00440.18 47 4.2e-08 26.0 0.0 1 1 6.3e-10 8.1e-08 25.1 0.0 2 46 13 57 12 58 0.95 # 5076 # 5660 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.607 1_97 - 518 AAA_19 PF13245.1 76 0.00012 15.1 0.0 1 1 2.6e-06 0.00034 13.7 0.0 10 46 226 259 218 268 0.79 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_24 - 215 CbiA PF01656.18 195 1.6e-09 30.7 0.1 1 1 1.8e-11 2.3e-09 30.2 0.1 1 145 4 124 4 173 0.79 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_33 - 228 MethyltransfD12 PF02086.10 260 0.00053 12.7 0.0 1 2 0.014 1.9 1.1 0.0 175 188 18 31 8 91 0.80 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 MethyltransfD12 PF02086.10 260 0.00053 12.7 0.0 2 2 4e-05 0.0052 9.5 0.0 20 46 163 189 148 197 0.78 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_109 - 96 Sigma70_r4_2 PF08281.7 54 6.3e-08 25.3 0.1 1 1 1.4e-09 1.9e-07 23.8 0.0 10 54 21 64 12 64 0.83 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 5_1 - 202 rve PF00665.21 120 3.1e-12 40.0 0.0 1 1 4.1e-14 5.3e-12 39.2 0.0 9 119 42 149 37 150 0.89 # 53 # 658 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_84 - 241 AAA_23 PF13476.1 202 0.00015 15.4 0.0 1 1 3.8e-06 0.00024 14.7 0.0 19 40 15 36 2 80 0.84 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA_23 PF13476.1 202 0.00016 15.3 0.2 1 1 9.7e-06 0.00063 13.4 0.0 20 38 226 244 208 249 0.84 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 2_4 - 283 TIGR00573 TIGR00573 217 2e-15 49.8 0.0 1 1 2.7e-17 3.5e-15 49.0 0.0 12 181 107 274 103 281 0.80 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_33 - 228 Methyltransf_26 PF13659.1 117 1.4e-11 37.8 0.1 1 2 2.6e-07 3.3e-05 17.2 0.0 57 114 7 71 2 74 0.69 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 Methyltransf_26 PF13659.1 117 1.4e-11 37.8 0.1 2 2 9.7e-08 1.2e-05 18.6 0.0 4 45 167 207 164 223 0.82 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_97 - 518 AAA_30 PF13604.1 196 0.00041 13.2 0.0 1 1 5.8e-06 0.00075 12.4 0.0 4 44 211 251 209 276 0.84 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 4_1 - 74 HTH_Tnp_1 PF01527.15 76 2e-05 17.8 0.3 1 1 6.6e-07 4.2e-05 16.8 0.3 4 52 6 59 4 64 0.80 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_Tnp_1 PF01527.15 76 2e-05 17.8 0.3 1 1 6.6e-07 4.2e-05 16.8 0.3 4 52 6 59 4 64 0.80 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_47 - 199 TIGR02433 TIGR02433 47 0.00024 13.5 0.1 1 1 4.4e-06 0.00057 12.3 0.0 29 45 7 23 6 25 0.90 # 35461 # 36057 # 1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.539 1_109 - 96 GerE PF00196.14 58 1.8e-06 20.5 0.0 1 1 1.9e-08 2.4e-06 20.1 0.0 3 49 21 67 19 72 0.89 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_59 - 764 TraG-D_C PF12696.2 128 6.7e-07 22.5 0.2 1 1 1.2e-08 1.5e-06 21.4 0.2 1 88 437 524 437 554 0.82 # 45210 # 47501 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_24 - 215 MipZ PF09140.6 261 3.1e-08 26.2 2.3 1 2 0.0008 0.1 4.8 0.5 7 25 8 26 2 38 0.71 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_24 - 215 MipZ PF09140.6 261 3.1e-08 26.2 2.3 2 2 9e-09 1.2e-06 21.1 0.1 70 133 45 108 25 125 0.84 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_33 - 228 UPF0020 PF01170.13 180 1.6e-05 17.8 0.0 1 2 0.00028 0.036 6.9 0.0 103 121 17 35 4 89 0.71 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 UPF0020 PF01170.13 180 1.6e-05 17.8 0.0 2 2 6.2e-05 0.0079 9.0 0.0 28 54 163 189 158 221 0.67 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_14 - 421 DDE_Tnp_1 PF01609.16 213 1e-34 113.2 0.2 1 1 1.7e-36 2.2e-34 112.1 0.0 6 213 128 362 123 362 0.96 # 10651 # 11913 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_103 - 198 Trp_repressor PF01371.14 88 0.00036 13.7 0.0 1 1 4.1e-06 0.00053 13.2 0.0 1 40 103 142 103 151 0.95 # 89705 # 90298 # -1 # ID=1_103;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.365 1_84 - 241 AAA_21 PF13304.1 303 0.0013 11.9 0.0 1 1 1.8e-05 0.0024 11.1 0.0 4 22 20 38 17 68 0.74 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA PF00004.24 132 0.00032 14.2 0.1 1 3 0.064 8.3 -0.1 0.0 38 57 81 100 52 110 0.81 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_97 - 518 AAA PF00004.24 132 0.00032 14.2 0.1 2 3 0.00033 0.042 7.3 0.0 1 21 228 248 228 278 0.83 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_97 - 518 AAA PF00004.24 132 0.00032 14.2 0.1 3 3 0.017 2.2 1.8 0.0 9 66 442 508 436 515 0.64 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_44 - 653 KorB PF08535.5 93 2.6e-05 17.6 0.0 1 1 6.1e-07 7.9e-05 16.1 0.0 2 43 152 193 151 202 0.93 # 32301 # 34259 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 1_33 - 228 N6_N4_Mtase PF01555.13 231 6.6e-36 117.2 0.0 1 1 1.8e-35 2.3e-33 108.8 0.0 1 228 21 200 21 203 0.91 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_26 - 327 Hydantoinase_A PF01968.13 290 9.1e-09 28.0 0.2 1 2 1.7e-06 0.00022 13.6 0.1 66 98 154 185 141 192 0.79 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_26 - 327 Hydantoinase_A PF01968.13 290 9.1e-09 28.0 0.2 2 2 5.5e-06 0.00071 11.9 0.0 211 263 244 296 201 301 0.86 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_97 - 518 AAA_16 PF13191.1 185 0.00012 15.4 0.0 1 1 6.4e-06 0.00041 13.6 0.0 8 51 213 252 212 301 0.78 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_84 - 241 AAA_16 PF13191.1 185 0.00017 14.8 0.0 1 1 5.3e-06 0.00034 13.9 0.0 27 52 18 46 6 141 0.80 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_84 - 241 AAA_22 PF13401.1 131 6.9e-06 19.5 0.0 1 1 2.3e-07 1.5e-05 18.4 0.0 4 47 15 55 10 92 0.76 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA_22 PF13401.1 131 0.00034 14.0 0.0 1 1 1.3e-05 0.00082 12.8 0.0 6 28 227 249 222 330 0.77 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_55 - 283 Methyltransf_27 PF13708.1 194 9.2e-67 217.6 0.0 1 1 9.6e-69 1.2e-66 217.2 0.0 2 194 85 278 84 278 0.96 # 40629 # 41477 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.511 1_97 - 518 AAA_29 PF13555.1 62 3.6e-05 16.5 0.0 1 1 1.1e-06 7.4e-05 15.6 0.0 21 40 224 242 217 254 0.83 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_84 - 241 AAA_29 PF13555.1 62 4e-05 16.4 0.0 1 1 1.2e-06 7.9e-05 15.5 0.0 26 44 18 36 9 45 0.84 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 4_1 - 74 HTH_32 PF13565.1 77 3.8e-07 24.1 0.0 1 1 9.2e-09 5.9e-07 23.5 0.0 26 76 5 50 2 51 0.84 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_32 PF13565.1 77 3.8e-07 24.1 0.0 1 1 9.2e-09 5.9e-07 23.5 0.0 26 76 5 50 2 51 0.84 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_26 - 327 TIGR02350 TIGR02350 596 0.00012 13.5 0.6 1 3 0.083 11 -2.9 0.0 362 381 80 99 67 130 0.59 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_26 - 327 TIGR02350 TIGR02350 596 0.00012 13.5 0.6 2 3 0.00011 0.014 6.7 0.0 175 200 159 181 142 198 0.82 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_26 - 327 TIGR02350 TIGR02350 596 0.00012 13.5 0.6 3 3 0.00048 0.061 4.5 0.0 271 348 220 295 205 308 0.85 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 2_4 - 283 RNase_H_2 PF13482.1 164 0.00014 14.9 0.0 1 1 7.8e-06 0.001 12.2 0.0 1 79 105 199 105 255 0.57 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_54 - 84 HTH_3 PF01381.17 55 3.6e-05 16.9 0.0 1 1 2e-06 0.00013 15.1 0.0 1 34 6 39 6 45 0.90 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_17 - 81 HTH_3 PF01381.17 55 0.00075 12.6 0.1 1 1 2.4e-05 0.0015 11.6 0.0 1 25 10 34 10 34 0.89 # 13557 # 13799 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_104 - 99 YMF19 PF02326.10 86 0.00045 14.1 1.0 1 1 3.5e-06 0.00045 14.1 1.0 13 68 43 95 32 98 0.82 # 90295 # 90591 # -1 # ID=1_104;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.391 1_14 - 421 DDE_Tnp_1_4 PF13701.1 449 4.2e-27 87.6 3.5 1 2 0.0052 0.67 1.2 0.0 11 42 5 36 3 62 0.72 # 10651 # 11913 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_14 - 421 DDE_Tnp_1_4 PF13701.1 449 4.2e-27 87.6 3.5 2 2 1.5e-28 1.9e-26 85.4 2.2 137 438 122 418 41 420 0.82 # 10651 # 11913 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_44 - 653 HTH_23 PF13384.1 50 5.6e-07 22.4 0.0 1 1 5.1e-07 9.3e-06 18.5 0.0 13 40 149 176 143 180 0.91 # 32301 # 34259 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 4_1 - 74 HTH_23 PF13384.1 50 1.6e-06 20.9 2.0 1 2 0.016 0.3 4.2 0.1 7 27 11 35 7 36 0.71 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_1 - 74 HTH_23 PF13384.1 50 1.6e-06 20.9 2.0 2 2 2.7e-06 5e-05 16.2 0.4 28 42 41 55 40 63 0.86 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_23 PF13384.1 50 1.6e-06 20.9 2.0 1 2 0.016 0.3 4.2 0.1 7 27 11 35 7 36 0.71 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 4_2 - 74 HTH_23 PF13384.1 50 1.6e-06 20.9 2.0 2 2 2.7e-06 5e-05 16.2 0.4 28 42 41 55 40 63 0.86 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_6 - 41 HTH_23 PF13384.1 50 1.2e-05 18.2 1.0 1 1 9.6e-07 1.8e-05 17.6 0.6 28 42 8 22 7 30 0.86 # 2792 # 2914 # 1 # ID=3_6;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 5_1 - 202 HTH_23 PF13384.1 50 3.9e-05 16.5 0.2 1 1 1.1e-05 0.0002 14.3 0.1 28 42 8 22 7 30 0.87 # 53 # 658 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_54 - 84 HTH_23 PF13384.1 50 4.6e-05 16.3 0.3 1 1 2.5e-05 0.00045 13.2 0.1 17 33 14 30 6 38 0.86 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_109 - 96 HTH_23 PF13384.1 50 4.7e-05 16.3 0.0 1 1 3.5e-06 6.5e-05 15.9 0.0 12 41 31 60 24 73 0.76 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_6 - 116 zf-DHHC PF01529.15 174 0.0022 10.7 4.5 1 1 1.2e-05 0.0015 11.2 3.1 88 151 32 108 30 113 0.77 # 5142 # 5489 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.339 1_54 - 84 HTH_19 PF12844.2 64 0.0001 15.6 0.0 1 1 2.3e-06 0.00015 15.1 0.0 7 53 9 56 5 67 0.87 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_17 - 81 HTH_19 PF12844.2 64 0.00051 13.4 0.5 1 1 9.6e-06 0.00062 13.1 0.5 2 18 8 24 7 70 0.84 # 13557 # 13799 # -1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.416 1_54 - 84 DUF1870 PF08965.5 118 0.00038 13.4 1.2 1 1 3.7e-06 0.00048 13.1 1.2 1 75 1 78 1 81 0.69 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_109 - 96 HTH_29 PF13551.1 112 0.00019 14.9 0.0 1 1 4.3e-06 0.00028 14.3 0.0 8 36 33 60 27 76 0.79 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_44 - 653 HTH_29 PF13551.1 112 0.00028 14.3 0.2 1 1 2.1e-05 0.0014 12.1 0.0 4 37 145 178 142 222 0.84 # 32301 # 34259 # 1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.583 2_4 - 283 DNA_pol_A_exo1 PF01612.15 176 1.6e-05 17.7 0.0 1 1 2.7e-07 3.5e-05 16.6 0.0 20 95 102 196 87 266 0.84 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_97 - 518 G-alpha PF00503.15 389 0.00081 11.3 0.0 1 2 0.054 7 -1.6 0.0 234 272 70 113 29 117 0.79 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_97 - 518 G-alpha PF00503.15 389 0.00081 11.3 0.0 2 2 1.9e-05 0.0024 9.8 0.0 58 87 225 254 214 325 0.84 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_53 - 86 UBA PF00627.26 37 0.00026 14.1 0.2 1 2 0.02 2.5 1.4 0.0 4 16 23 35 20 36 0.81 # 39510 # 39767 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 1_53 - 86 UBA PF00627.26 37 0.00026 14.1 0.2 2 2 2.5e-05 0.0032 10.7 0.0 5 22 52 69 49 69 0.87 # 39510 # 39767 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 5_1 - 202 DDE_Tnp_IS66 PF03050.9 271 9.7e-09 28.0 0.1 1 1 3e-10 1.3e-08 27.6 0.1 29 132 1 111 1 142 0.87 # 53 # 658 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 4_1 - 74 DDE_Tnp_IS66 PF03050.9 271 1.9e-06 20.5 0.0 1 1 4.5e-08 1.9e-06 20.5 0.0 5 55 10 60 6 68 0.88 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 DDE_Tnp_IS66 PF03050.9 271 1.9e-06 20.5 0.0 1 1 4.5e-08 1.9e-06 20.5 0.0 5 55 10 60 6 68 0.88 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_88 - 194 DNA_pol3_delta PF06144.8 172 2.7e-06 20.3 0.0 1 1 3e-08 3.8e-06 19.8 0.0 35 99 91 151 73 178 0.80 # 74178 # 74759 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.402 1_59 - 764 TrwB_AAD_bind PF10412.4 386 2.9e-06 19.3 0.2 1 2 9.3e-05 0.012 7.4 0.0 11 32 132 153 126 157 0.84 # 45210 # 47501 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_59 - 764 TrwB_AAD_bind PF10412.4 386 2.9e-06 19.3 0.2 2 2 3e-05 0.0039 9.0 0.1 247 332 440 525 427 555 0.88 # 45210 # 47501 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_24 - 215 TIGR01968 TIGR01968 261 0.0001 14.7 2.1 1 2 8.1e-06 0.00052 12.3 0.8 3 50 3 44 1 49 0.80 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_24 - 215 TIGR01968 TIGR01968 261 0.0001 14.7 2.1 2 2 0.017 1.1 1.5 0.0 101 140 63 102 49 123 0.75 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_26 - 327 TIGR01968 TIGR01968 261 0.00056 12.2 1.5 1 1 3.5e-05 0.0023 10.2 1.4 46 128 63 155 60 215 0.74 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_84 - 241 AAA_18 PF13238.1 129 8.9e-06 19.3 0.0 1 1 2.8e-07 1.8e-05 18.3 0.0 2 42 19 55 19 93 0.83 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA_18 PF13238.1 129 0.00042 13.9 0.0 1 1 2.1e-05 0.0014 12.2 0.0 1 18 228 245 228 316 0.86 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_28 - 425 IMS_HHH PF11798.3 32 4e-08 26.3 0.2 1 1 9.1e-10 1.2e-07 24.9 0.2 3 32 172 201 170 201 0.93 # 20974 # 22248 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_33 - 228 Methyltransf_15 PF09445.5 164 0.001 11.9 0.0 1 2 0.045 5.8 -0.3 0.0 53 79 4 29 2 32 0.90 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 1_33 - 228 Methyltransf_15 PF09445.5 164 0.001 11.9 0.0 2 2 4.2e-05 0.0055 9.5 0.0 3 31 166 194 164 209 0.86 # 24634 # 25317 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.564 2_4 - 283 TIGR01406 TIGR01406 231 3.9e-17 55.5 0.0 1 1 5.2e-19 6.7e-17 54.8 0.0 4 170 106 268 104 280 0.78 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_76 - 235 DUF3810 PF12725.2 318 0.0011 11.1 0.8 1 1 1.4e-05 0.0018 10.4 0.8 90 174 106 189 95 194 0.86 # 62612 # 63316 # -1 # ID=1_76;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.504 1_84 - 241 DUF87 PF01935.12 229 0.00043 13.4 0.0 1 1 6.1e-06 0.00079 12.5 0.0 28 56 20 49 19 50 0.88 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 3_6 - 41 HTH_28 PF13518.1 52 1.2e-05 18.6 0.2 1 1 7.5e-07 1.9e-05 17.9 0.2 23 36 8 21 4 22 0.92 # 2792 # 2914 # 1 # ID=3_6;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.553 4_1 - 74 HTH_28 PF13518.1 52 1.4e-05 18.3 1.9 1 1 2.5e-06 6.5e-05 16.2 1.9 22 36 40 54 12 55 0.71 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 HTH_28 PF13518.1 52 1.4e-05 18.3 1.9 1 1 2.5e-06 6.5e-05 16.2 1.9 22 36 40 54 12 55 0.71 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 5_1 - 202 HTH_28 PF13518.1 52 9.2e-05 15.7 0.2 1 1 1.1e-05 0.00028 14.2 0.2 23 36 8 21 6 22 0.92 # 53 # 658 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_109 - 96 HTH_28 PF13518.1 52 0.00019 14.7 0.0 1 1 2.2e-05 0.00056 13.2 0.0 9 38 33 62 26 75 0.86 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_4 - 283 TIGR01298 TIGR01298 200 7.7e-07 22.0 1.0 1 1 5.7e-08 7.3e-06 18.8 1.0 93 189 167 267 97 275 0.80 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_54 - 84 HTH_31 PF13560.1 64 8.2e-07 22.5 2.0 1 2 1e-08 1.3e-06 21.9 1.2 3 43 3 43 2 57 0.86 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_54 - 84 HTH_31 PF13560.1 64 8.2e-07 22.5 2.0 2 2 0.1 13 -0.6 0.0 17 34 65 72 44 82 0.58 # 39798 # 40049 # -1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.552 1_97 - 518 T2SE PF00437.15 272 3.1e-41 134.3 0.1 1 1 9.6e-43 6.2e-41 133.3 0.0 10 271 97 373 90 374 0.85 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_84 - 241 T2SE PF00437.15 272 4.1e-36 117.5 0.0 1 1 9.4e-38 6.1e-36 116.9 0.0 120 269 7 164 4 167 0.87 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_26 - 327 StbA PF06406.6 318 1.6e-156 513.3 1.2 1 1 1.4e-158 1.8e-156 513.2 1.2 1 318 1 319 1 319 1.00 # 19583 # 20563 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.440 1_84 - 241 AAA_17 PF13207.1 121 6.6e-06 20.2 0.1 1 2 2.1e-06 0.00014 16.0 0.0 3 49 19 68 19 111 0.75 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_84 - 241 AAA_17 PF13207.1 121 6.6e-06 20.2 0.1 2 2 0.036 2.3 2.3 0.1 58 113 185 221 131 233 0.59 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA_17 PF13207.1 121 2.8e-05 18.2 0.2 1 1 2.1e-06 0.00013 16.0 0.0 1 24 227 255 227 345 0.72 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 2_3 - 87 TIGR02211 TIGR02211 221 0.00022 13.7 0.0 1 1 1.7e-06 0.00022 13.7 0.0 121 168 15 66 1 80 0.80 # 2644 # 2904 # 1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.548 1_84 - 241 AAA_25 PF13481.1 194 0.0002 14.1 0.0 1 1 6e-06 0.00039 13.1 0.0 25 58 7 40 4 73 0.81 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_97 - 518 AAA_25 PF13481.1 194 0.00036 13.2 0.1 1 2 8.7e-05 0.0056 9.3 0.0 25 65 217 260 200 270 0.72 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_97 - 518 AAA_25 PF13481.1 194 0.00036 13.2 0.1 2 2 0.039 2.5 0.7 0.0 153 190 297 337 292 340 0.74 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_97 - 518 AAA_14 PF13173.1 128 0.001 12.3 0.0 1 1 3.7e-05 0.0048 10.1 0.0 5 30 228 254 225 286 0.80 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_24 - 215 VirC1 PF07015.6 231 0.00052 12.4 0.0 1 2 0.00073 0.094 5.0 0.0 3 29 3 29 1 36 0.81 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_24 - 215 VirC1 PF07015.6 231 0.00052 12.4 0.0 2 2 0.00052 0.067 5.5 0.0 87 190 77 181 59 194 0.70 # 18130 # 18774 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 1_109 - 96 HTH_Tnp_ISL3 PF13542.1 52 7.8e-05 15.1 0.0 1 1 9.7e-07 0.00013 14.5 0.0 29 50 38 59 34 60 0.89 # 93819 # 94106 # -1 # ID=1_109;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.448 4_1 - 74 Arg_repressor PF01316.16 70 0.00067 12.5 0.0 1 1 1.5e-05 0.00094 12.0 0.0 23 46 29 52 26 55 0.92 # 3 # 224 # -1 # ID=4_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 4_2 - 74 Arg_repressor PF01316.16 70 0.00067 12.5 0.0 1 1 1.5e-05 0.00094 12.0 0.0 23 46 29 52 26 55 0.92 # 1240 # 1461 # 1 # ID=4_2;partial=01;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_84 - 241 RNA_helicase PF00910.17 107 6.9e-05 16.3 0.0 1 1 9.6e-07 0.00012 15.5 0.0 2 28 19 45 18 64 0.83 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 3_3 - 263 Trans_reg_C PF00486.23 77 4.1e-09 29.6 0.0 1 1 6e-11 7.8e-09 28.7 0.0 10 75 34 97 25 99 0.83 # 575 # 1363 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.556 1_84 - 241 ATP_bind_1 PF03029.12 238 3.3e-05 16.8 0.0 1 1 3.9e-07 5.1e-05 16.1 0.0 1 23 20 42 20 55 0.86 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 5_1 - 202 DDE_Tnp_IS240 PF13610.1 140 6.6e-53 171.7 0.0 1 1 6.7e-55 8.7e-53 171.3 0.0 4 139 42 179 40 180 0.99 # 53 # 658 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_97 - 518 DAP3 PF10236.4 309 0.0008 11.6 0.0 1 1 1.2e-05 0.0015 10.7 0.0 21 42 223 244 215 253 0.86 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 2_10 - 302 LYTB PF02401.13 281 0.00088 11.5 0.0 1 1 2e-05 0.0026 9.9 0.0 236 272 81 117 70 124 0.91 # 6895 # 7800 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_4 - 283 RNase_T PF00929.19 164 4.3e-26 85.4 0.0 1 1 4.3e-28 5.5e-26 85.0 0.0 1 163 105 262 105 263 0.95 # 2944 # 3792 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG/GGAGG;rbs_spacer=11-12bp;gc_cont=0.564 1_71 - 1015 AAA_10 PF12846.2 304 1.5e-30 99.9 0.0 1 1 1e-31 3.4e-30 98.7 0.0 8 302 502 897 498 898 0.89 # 57460 # 60504 # -1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.507 1_59 - 764 AAA_10 PF12846.2 304 3.3e-05 16.6 1.0 1 1 3.1e-06 0.0001 15.1 1.0 2 287 137 501 136 514 0.62 # 45210 # 47501 # -1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.499 1_97 - 518 AAA_10 PF12846.2 304 0.00029 13.6 0.0 1 1 1.7e-05 0.00054 12.7 0.0 4 30 228 256 226 320 0.81 # 83180 # 84733 # -1 # ID=1_97;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_84 - 241 AAA_10 PF12846.2 304 0.00034 13.4 0.0 1 1 2.2e-05 0.00069 12.3 0.0 2 22 16 36 15 55 0.82 # 71366 # 72088 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.513 1_40 - 556 UPF0547 PF10571.4 26 0.012 8.7 3.8 1 2 0.085 11 -0.8 0.2 16 22 94 102 93 103 0.80 # 28584 # 30251 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_40 - 556 UPF0547 PF10571.4 26 0.012 8.7 3.8 2 2 5.7e-05 0.0073 9.3 0.5 1 10 498 507 498 511 0.89 # 28584 # 30251 # -1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.499 1_53 - 86 Yae1_N PF09811.4 39 2.2e-06 20.4 1.8 1 1 2.8e-08 3.6e-06 19.8 1.8 15 31 30 46 29 47 0.92 # 39510 # 39767 # 1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.523 1_42 - 176 SSB PF00436.20 104 7.8e-41 131.5 0.3 1 1 7.9e-43 1e-40 131.1 0.3 1 101 6 109 6 112 0.96 # 31419 # 31946 # 1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.598 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/e959ac66-9672-4c35-a3f3-3f9861463fa7 # Target file: checkm_output/bins/pm171/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm171/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/e959ac66-9672-4c35-a3f3-3f9861463fa7 checkm_output/bins/pm171/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:50:11 2017 # [ok]