# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_3 - 92 Zn_Tnp_IS1 PF03811.8 36 1.4e-23 74.5 3.6 1 1 4e-25 2.6e-23 73.6 3.6 1 36 1 36 1 36 0.99 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_2 - 186 HTH_IclR PF09339.5 52 8e-06 17.7 0.2 1 1 9.2e-07 3e-05 15.9 0.0 15 40 155 180 151 181 0.85 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_5 - 229 HTH_IclR PF09339.5 52 0.00012 14.0 0.1 1 1 7.1e-06 0.00023 13.1 0.1 7 48 29 69 28 72 0.91 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 1_12 - 95 HTH_22 PF13309.1 64 7e-07 21.3 0.1 1 1 8e-08 2.6e-06 19.5 0.0 19 64 4 44 1 44 0.88 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 186 HTH_22 PF13309.1 64 0.00018 13.6 1.5 1 1 2.4e-05 0.00077 11.6 0.1 35 63 156 179 143 180 0.76 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_6 - 424 Cdd1 PF11731.3 93 0.00026 13.3 0.0 1 1 1.1e-05 0.00073 11.8 0.0 10 47 177 214 143 227 0.86 # 5062 # 6333 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_8 - 1234 N6_Mtase PF02384.11 311 7.1e-13 40.5 0.0 1 2 6.6e-08 4.3e-06 18.2 0.0 40 102 299 371 262 388 0.81 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_8 - 1234 N6_Mtase PF02384.11 311 7.1e-13 40.5 0.0 2 2 2.3e-08 1.5e-06 19.7 0.0 122 259 500 638 468 650 0.74 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_11 - 268 rve_3 PF13683.1 67 1.5e-17 55.2 0.0 1 1 4.6e-19 3e-17 54.3 0.0 5 67 196 259 192 259 0.97 # 17829 # 18632 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 3_2 - 186 HTH_40 PF14493.1 91 0.00043 12.8 0.6 1 1 2.1e-05 0.0014 11.2 0.1 7 32 152 177 147 183 0.89 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_2 - 186 HTH_38 PF13936.1 44 2e-06 19.6 1.4 1 1 2.4e-07 3.8e-06 18.7 0.0 9 41 147 179 145 182 0.93 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 6_3 - 129 HTH_38 PF13936.1 44 0.00019 13.3 0.0 1 1 1.6e-05 0.00026 12.9 0.0 5 31 12 41 8 45 0.83 # 211 # 597 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.442 1_12 - 95 HTH_38 PF13936.1 44 0.00031 12.6 0.7 1 1 4.4e-05 0.00071 11.5 0.0 17 42 19 44 3 45 0.77 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_8 - 215 HTH_38 PF13936.1 44 0.0049 8.8 5.9 1 1 6.5e-05 0.0011 10.9 0.2 28 43 191 206 171 207 0.80 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 3_7 - 207 MobB PF03205.9 140 1.7e-06 20.1 0.4 1 1 1.4e-07 8.8e-06 17.8 0.1 10 104 12 88 2 104 0.68 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_5 - 229 HTH_34 PF13601.1 80 1e-08 27.4 0.4 1 2 5e-08 3.3e-06 19.4 0.0 2 49 27 74 26 81 0.91 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_5 - 229 HTH_34 PF13601.1 80 1e-08 27.4 0.4 2 2 0.00083 0.054 5.9 0.1 59 74 212 227 206 228 0.90 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_5 - 229 MarR PF01047.17 59 0.00014 13.9 0.1 1 1 9.6e-06 0.00062 11.8 0.1 6 48 28 70 25 73 0.88 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_2 - 223 TetR_N PF00440.18 47 1e-18 59.1 0.0 1 1 7.8e-20 1.7e-18 58.4 0.0 2 47 44 89 43 89 0.96 # 507 # 1175 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.326 4_4 - 208 TetR_N PF00440.18 47 2.2e-18 58.0 0.0 1 2 2.6e-18 5.5e-17 53.5 0.0 2 47 10 55 9 55 0.97 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 4_4 - 208 TetR_N PF00440.18 47 2.2e-18 58.0 0.0 2 2 0.024 0.52 2.4 0.0 1 15 169 183 169 185 0.86 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 1_12 - 95 TetR_N PF00440.18 47 8.5e-06 17.7 0.3 1 1 9.7e-07 2.1e-05 16.5 0.0 4 35 13 41 12 42 0.93 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_7 - 207 CbiA PF01656.18 195 6.8e-29 92.9 1.6 1 1 5.3e-30 1.7e-28 91.6 1.6 1 142 4 123 4 163 0.77 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_8 - 402 CbiA PF01656.18 195 9.8e-19 59.8 0.0 1 1 5.6e-20 1.8e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_12 - 95 Sigma70_r4_2 PF08281.7 54 7.7e-05 14.5 1.8 1 2 4.5e-06 0.00014 13.6 0.1 22 48 18 44 11 47 0.83 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 Sigma70_r4_2 PF08281.7 54 7.7e-05 14.5 1.8 2 2 0.073 2.4 0.1 0.2 2 15 63 76 62 82 0.78 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 325 Sigma70_r4_2 PF08281.7 54 0.00027 12.7 0.1 1 1 2.7e-05 0.00089 11.1 0.1 23 50 157 184 152 185 0.88 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_10 - 289 Rep_3 PF01051.16 222 7.8e-49 158.5 0.0 1 1 1.5e-50 9.6e-49 158.2 0.0 3 213 65 278 63 283 0.95 # 9455 # 10321 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.441 1_11 - 268 rve PF00665.21 120 1.7e-32 104.4 0.0 1 1 4.1e-34 2.6e-32 103.8 0.0 3 119 106 220 104 221 0.98 # 17829 # 18632 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_12 - 95 Terminase_5 PF06056.7 58 1.3e-05 17.0 0.0 1 1 3.4e-07 2.2e-05 16.3 0.0 12 39 21 48 12 63 0.87 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_7 - 207 AAA_24 PF13479.1 213 0.00041 12.3 0.6 1 2 1.7e-05 0.0011 10.9 0.1 12 88 11 95 3 99 0.81 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 AAA_24 PF13479.1 213 0.00041 12.3 0.6 2 2 0.078 5 -1.1 0.0 168 206 118 156 115 164 0.79 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_8 - 1234 Methyltransf_26 PF13659.1 117 2.9e-15 48.7 0.0 1 1 1.9e-16 1.2e-14 46.6 0.0 3 107 307 552 305 562 0.68 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_10 - 692 TIGR00416 TIGR00416 454 1.2e-09 29.4 0.0 1 1 3.1e-11 2e-09 28.6 0.0 372 436 596 660 573 674 0.88 # 15646 # 17721 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 4_6 - 129 ACT_7 PF13840.1 65 4.4e-05 15.3 0.1 1 1 2e-06 0.00013 13.8 0.0 9 60 65 120 57 123 0.74 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 3_7 - 207 AAA_30 PF13604.1 196 0.00023 13.1 0.4 1 1 7.4e-06 0.00048 12.0 0.1 26 106 10 88 2 97 0.75 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_7 - 325 CPSase_L_D3 PF02787.14 123 3.2e-05 16.0 0.7 1 2 0.018 1.2 1.3 0.0 75 116 16 55 6 57 0.82 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_7 - 325 CPSase_L_D3 PF02787.14 123 3.2e-05 16.0 0.7 2 2 7.2e-06 0.00047 12.3 0.2 48 97 133 185 124 190 0.84 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_12 - 95 HTH_Tnp_1 PF01527.15 76 1.7e-19 61.9 0.2 1 1 3.4e-21 2.2e-19 61.5 0.2 4 76 3 74 1 74 0.94 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_7 - 207 MipZ PF09140.6 261 1.2e-14 46.3 0.9 1 2 2.6e-11 8.5e-10 30.4 0.0 2 47 3 47 2 57 0.88 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 MipZ PF09140.6 261 1.2e-14 46.3 0.9 2 2 1.6e-06 5.3e-05 14.6 0.3 96 141 73 118 52 146 0.85 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_8 - 402 MipZ PF09140.6 261 1.2e-06 20.0 0.0 1 2 0.0053 0.17 3.1 0.0 3 50 111 163 109 193 0.73 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 2_8 - 402 MipZ PF09140.6 261 1.2e-06 20.0 0.0 2 2 1.7e-06 5.6e-05 14.6 0.0 87 136 233 282 220 296 0.87 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_8 - 1234 UPF0020 PF01170.13 180 4.7e-09 28.3 0.0 1 2 1.9e-08 1.2e-06 20.5 0.0 31 75 307 360 300 369 0.78 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_8 - 1234 UPF0020 PF01170.13 180 4.7e-09 28.3 0.0 2 2 0.001 0.067 5.0 0.0 90 135 491 532 475 551 0.68 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 9_1 - 348 DDE_Tnp_1 PF01609.16 213 3.7e-28 90.8 0.0 1 1 2.6e-29 5.6e-28 90.2 0.0 4 210 59 296 56 299 0.93 # 1 # 1044 # 1 # ID=9_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.452 8_1 - 323 DDE_Tnp_1 PF01609.16 213 1.2e-24 79.3 0.6 1 1 7.6e-26 1.7e-24 78.8 0.6 4 205 130 301 127 308 0.88 # 34 # 1002 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 3_4 - 266 DDE_Tnp_1 PF01609.16 213 2.1e-21 68.7 0.8 1 1 1.3e-22 2.8e-21 68.3 0.8 4 178 115 260 112 263 0.87 # 5071 # 5868 # -1 # ID=3_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 4_6 - 129 ACT PF01842.20 66 6.2e-08 24.4 0.2 1 2 0.011 0.69 1.9 0.0 6 26 7 27 3 47 0.85 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 4_6 - 129 ACT PF01842.20 66 6.2e-08 24.4 0.2 2 2 1.6e-08 1e-06 20.5 0.0 9 29 78 98 74 115 0.91 # 3870 # 4256 # -1 # ID=4_6;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.388 2_7 - 325 Trp_repressor PF01371.14 88 0.00054 12.2 1.9 1 1 3.9e-05 0.0025 10.1 0.1 15 69 127 180 119 187 0.81 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 1_6 - 1226 AAA_21 PF13304.1 303 0.0034 9.6 5.5 1 2 2e-05 0.0013 11.0 0.6 9 74 77 142 77 246 0.47 # 3798 # 7475 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_6 - 1226 AAA_21 PF13304.1 303 0.0034 9.6 5.5 2 2 0.06 3.9 -0.4 0.4 115 196 496 576 454 615 0.60 # 3798 # 7475 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_12 - 95 Sigma70_r4 PF04545.11 50 0.0001 13.9 0.7 1 2 2.2e-05 0.0014 10.2 0.2 13 33 15 35 11 37 0.83 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 Sigma70_r4 PF04545.11 50 0.0001 13.9 0.7 2 2 0.035 2.3 -0.0 0.0 6 14 75 83 75 89 0.83 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_7 - 325 HTH_37 PF13744.1 80 4.9e-05 15.4 2.7 1 2 0.011 0.74 2.1 0.0 27 56 9 38 6 43 0.82 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 2_7 - 325 HTH_37 PF13744.1 80 4.9e-05 15.4 2.7 2 2 3e-05 0.002 10.3 0.2 27 53 156 182 134 185 0.87 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 7_2 - 647 zf-C4_Topoisom PF01396.14 39 0.0016 10.3 2.2 1 1 5.3e-05 0.0034 9.2 2.2 4 21 564 579 561 585 0.78 # 181 # 2121 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.465 4_5 - 229 HTH_27 PF13463.1 68 4.2e-05 16.2 0.3 1 1 2.5e-06 0.00016 14.3 0.0 7 48 29 69 25 82 0.85 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 1_8 - 1234 Eco57I PF07669.6 106 4.5e-09 29.0 0.0 1 1 4.9e-10 3.2e-08 26.2 0.0 2 100 503 606 502 611 0.85 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_11 - 268 rve_2 PF13333.1 52 3.4e-17 54.6 0.2 1 1 9e-19 5.8e-17 53.9 0.2 1 50 211 265 211 266 0.93 # 17829 # 18632 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_12 - 95 MerR_1 PF13411.1 69 5.9e-06 18.4 0.0 1 1 2e-07 1.3e-05 17.2 0.0 1 22 23 44 23 51 0.94 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_7 - 207 cobW PF02492.14 178 0.00016 13.4 0.2 1 2 1.8e-05 0.0012 10.6 0.0 10 38 12 41 3 47 0.86 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 cobW PF02492.14 178 0.00016 13.4 0.2 2 2 0.019 1.3 0.7 0.1 114 146 115 147 71 170 0.78 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_1 - 139 HTH_AraC PF00165.18 42 6.8e-22 69.1 2.3 1 2 2.6e-12 1.7e-10 32.8 0.0 1 42 37 78 37 78 0.97 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_1 - 139 HTH_AraC PF00165.18 42 6.8e-22 69.1 2.3 2 2 3.6e-13 2.3e-11 35.6 1.1 2 42 90 128 89 128 0.95 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_9 - 42 HTH_1 PF00126.22 60 1.7e-15 48.9 0.1 1 1 2.8e-17 1.8e-15 48.8 0.1 1 38 3 40 3 41 0.96 # 6449 # 6574 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 1_12 - 95 LZ_Tnp_IS481 PF13011.1 85 1.6e-05 17.5 0.1 1 1 3.3e-07 2.2e-05 17.1 0.1 17 50 14 47 2 87 0.84 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_Tnp_IS630 PF01710.11 120 3.8e-07 22.1 0.1 1 1 1.4e-08 4.4e-07 21.9 0.1 13 82 17 90 6 94 0.75 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_2 - 186 HTH_Tnp_IS630 PF01710.11 120 6.1e-05 15.0 0.0 1 1 3.9e-06 0.00013 14.0 0.0 8 44 148 184 145 185 0.90 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_7 - 207 SRP54 PF00448.17 196 6.9e-05 14.6 0.4 1 1 3.6e-06 0.00023 12.9 0.3 11 54 12 50 2 142 0.73 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_8 - 215 HTH_32 PF13565.1 77 0.00086 12.4 3.1 1 1 1.3e-05 0.00087 12.4 1.5 8 51 149 188 139 206 0.72 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_12 - 95 HTH_3 PF01381.17 55 2.4e-06 19.7 0.0 1 2 1.8e-07 1.2e-05 17.5 0.0 4 33 15 46 13 51 0.86 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_3 PF01381.17 55 2.4e-06 19.7 0.0 2 2 0.073 4.8 -0.5 0.0 39 52 80 93 79 94 0.80 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_23 PF13384.1 50 6.1e-09 27.7 3.6 1 2 8.1e-10 8.8e-09 27.2 0.2 10 40 14 45 9 59 0.83 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_23 PF13384.1 50 6.1e-09 27.7 3.6 2 2 0.077 0.84 1.8 0.5 7 24 62 86 56 91 0.53 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_8 - 215 HTH_23 PF13384.1 50 8.7e-08 24.0 0.1 1 1 2e-08 2.1e-07 22.8 0.1 5 40 171 206 167 212 0.91 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 2_3 - 92 HTH_23 PF13384.1 50 2.5e-05 16.2 0.0 1 1 3.8e-06 4.1e-05 15.5 0.0 7 39 53 85 51 89 0.93 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_2 - 186 HTH_23 PF13384.1 50 2.9e-05 16.0 0.3 1 1 2.6e-06 2.9e-05 16.0 0.3 5 39 146 180 142 184 0.87 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_7 - 325 HTH_23 PF13384.1 50 0.00012 14.0 0.2 1 1 0.00015 0.0016 10.5 0.0 9 40 152 183 151 188 0.88 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 4_4 - 208 HTH_23 PF13384.1 50 0.00016 13.6 0.0 1 1 3.9e-05 0.00043 12.3 0.0 10 39 13 47 11 56 0.81 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 3_7 - 207 Fer4_NifH PF00142.13 273 1e-06 20.4 0.0 1 1 2.8e-08 1.8e-06 19.6 0.0 8 64 10 66 3 89 0.90 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_2 - 186 HTH_7 PF02796.10 45 1.5e-13 42.7 1.1 1 1 1.5e-14 3.3e-13 41.6 0.1 1 44 141 181 141 182 0.97 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_8 - 215 HTH_7 PF02796.10 45 1.7e-08 26.6 0.3 1 2 0.0012 0.026 6.8 0.0 2 26 79 104 79 105 0.86 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 3_8 - 215 HTH_7 PF02796.10 45 1.7e-08 26.6 0.3 2 2 6.3e-07 1.4e-05 17.3 0.0 1 38 165 200 165 200 0.96 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 1_12 - 95 HTH_7 PF02796.10 45 2.9e-05 16.3 0.0 1 1 2.8e-06 6e-05 15.2 0.0 13 44 14 45 8 46 0.89 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_19 PF12844.2 64 8.5e-06 18.1 0.1 1 1 2.6e-07 1.7e-05 17.2 0.0 9 34 19 44 16 62 0.89 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 2_3 - 92 zinc_ribbon_4 PF13717.1 36 1e-05 17.5 2.8 1 1 3.6e-07 2.3e-05 16.4 2.8 3 35 6 39 5 40 0.86 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 6_3 - 129 Ribosomal_S20p PF01649.13 84 0.00018 14.2 0.1 1 1 4.8e-06 0.00031 13.4 0.1 6 59 56 109 53 118 0.75 # 211 # 597 # -1 # ID=6_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.442 3_2 - 186 HTH_29 PF13551.1 112 6.9e-05 15.3 0.6 1 2 0.025 1.6 1.3 0.2 24 46 114 136 88 153 0.67 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_2 - 186 HTH_29 PF13551.1 112 6.9e-05 15.3 0.6 2 2 1e-05 0.00066 12.2 0.0 4 35 151 181 148 184 0.90 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_7 - 207 DUF1611 PF07755.6 301 2.4e-06 18.6 0.3 1 1 5.8e-08 3.8e-06 18.0 0.3 124 200 13 90 11 106 0.86 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_8 - 1234 Methyltransf_31 PF13847.1 152 7.5e-05 14.7 0.0 1 1 3e-06 0.00019 13.3 0.0 3 38 304 356 302 362 0.67 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_10 - 692 TIGR00763 TIGR00763 795 1.6e-15 48.5 0.0 1 1 3.8e-17 2.4e-15 47.9 0.0 636 792 530 686 423 688 0.84 # 15646 # 17721 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 3_7 - 207 TIGR01968 TIGR01968 261 2.6e-12 38.6 1.6 1 2 2.1e-09 6.7e-08 24.1 0.0 2 39 2 39 1 47 0.90 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 TIGR01968 TIGR01968 261 2.6e-12 38.6 1.6 2 2 2.5e-06 8e-05 14.0 0.3 109 179 73 145 56 196 0.76 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_8 - 402 TIGR01968 TIGR01968 261 0.00055 11.3 0.0 1 2 0.018 0.59 1.3 0.0 4 28 111 135 108 169 0.76 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 2_8 - 402 TIGR01968 TIGR01968 261 0.00055 11.3 0.0 2 2 0.00031 0.01 7.1 0.0 102 138 235 271 226 288 0.87 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 2_6 - 424 IMS_HHH PF11798.3 32 1.7e-08 26.6 0.1 1 1 6.4e-10 4.1e-08 25.3 0.1 2 32 170 200 169 200 0.91 # 5062 # 6333 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_3 - 92 HTH_Tnp_IS1 PF12759.2 46 7e-32 101.0 0.2 1 1 1.7e-33 1.1e-31 100.4 0.2 1 45 43 87 43 88 0.99 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_12 - 95 HTH_28 PF13518.1 52 1.3e-08 27.1 0.2 1 1 1.5e-09 2.4e-08 26.2 0.2 1 35 10 45 10 47 0.90 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_8 - 215 HTH_28 PF13518.1 52 1.4e-05 17.4 0.2 1 1 2.7e-06 4.4e-05 15.8 0.2 4 35 175 206 172 206 0.92 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 2_3 - 92 HTH_28 PF13518.1 52 2.7e-05 16.5 0.0 1 1 2.4e-06 4e-05 15.9 0.0 4 36 55 87 53 91 0.90 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_2 - 186 HTH_28 PF13518.1 52 8.8e-05 14.8 0.0 1 1 1.7e-05 0.00028 13.2 0.0 8 33 154 179 148 184 0.82 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_4 - 208 HTH_Tnp_1_2 PF13022.1 142 6.5e-05 15.1 0.0 1 1 1.7e-06 0.00011 14.3 0.0 26 77 15 64 2 68 0.78 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 4_5 - 229 HTH_24 PF13412.1 48 5e-07 21.4 0.1 1 1 3e-08 9.9e-07 20.5 0.1 3 48 25 70 23 70 0.90 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 2_7 - 325 HTH_24 PF13412.1 48 7.4e-05 14.5 0.1 1 1 2.3e-06 7.4e-05 14.5 0.1 15 39 158 182 151 184 0.84 # 6415 # 7389 # -1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.448 4_1 - 139 HTH_18 PF12833.2 81 5.2e-24 76.5 2.0 1 1 1.1e-25 6.9e-24 76.1 2.0 1 81 50 129 50 129 0.97 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 1_8 - 1234 TIGR03534 TIGR03534 253 6.2e-05 14.5 0.0 1 2 0.0016 0.1 4.0 0.0 87 110 303 326 285 369 0.64 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_8 - 1234 TIGR03534 TIGR03534 253 6.2e-05 14.5 0.0 2 2 0.0001 0.0068 7.8 0.0 139 168 489 515 478 525 0.75 # 9271 # 12972 # 1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.454 1_12 - 95 HTH_10 PF04967.7 53 1.5e-06 20.1 0.1 1 2 1.9e-06 6.3e-05 14.9 0.0 21 47 20 46 19 48 0.92 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 HTH_10 PF04967.7 53 1.5e-06 20.1 0.1 2 2 0.01 0.34 2.9 0.0 2 14 75 87 75 89 0.90 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_5 - 229 HTH_10 PF04967.7 53 0.00047 12.1 0.2 1 1 5.5e-05 0.0018 10.2 0.0 22 46 38 62 36 65 0.92 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 3_7 - 207 LpxK PF02606.9 326 3.5e-05 15.1 0.1 1 1 8.4e-07 5.4e-05 14.5 0.1 46 71 11 36 2 38 0.94 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_10 - 692 Lon_C PF05362.8 205 4.5e-17 54.3 0.0 1 1 1.4e-18 8.8e-17 53.3 0.0 44 200 529 686 505 690 0.86 # 15646 # 17721 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_12 - 95 HTH_31 PF13560.1 64 1.7e-05 17.3 0.2 1 1 4.8e-07 3.1e-05 16.5 0.2 12 53 20 61 11 63 0.90 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_10 - 692 ChlI PF13541.1 121 1.5e-06 20.1 0.2 1 1 7.6e-08 5e-06 18.4 0.0 62 120 598 656 570 657 0.89 # 15646 # 17721 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 3_7 - 207 AAA_17 PF13207.1 121 5.5e-05 16.3 0.0 1 1 1.1e-06 7.5e-05 15.9 0.0 9 80 12 86 11 171 0.71 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 VirC1 PF07015.6 231 4.8e-15 47.5 0.2 1 1 1.5e-16 9.7e-15 46.5 0.2 1 131 1 123 1 174 0.79 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_12 - 95 HTH_Tnp_ISL3 PF13542.1 52 2.5e-07 22.1 0.0 1 1 6e-09 3.9e-07 21.5 0.0 10 50 4 45 3 47 0.95 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_12 - 95 MerR PF00376.18 38 2.7e-05 16.0 0.0 1 1 8.6e-07 5.6e-05 15.0 0.0 1 21 24 44 24 45 0.91 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 4_4 - 208 CENP-B_N PF04218.8 53 0.00032 12.4 0.0 1 1 1e-05 0.00065 11.5 0.0 26 51 28 53 23 55 0.90 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 3_7 - 207 ArgK PF03308.11 267 7.1e-05 13.9 0.0 1 1 2.5e-06 0.00017 12.7 0.0 39 72 12 45 5 53 0.90 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_1 - 139 Ribosomal_S8 PF00410.14 129 0.00086 11.5 1.8 1 2 0.0059 0.38 2.9 0.1 41 73 2 29 1 35 0.56 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_1 - 139 Ribosomal_S8 PF00410.14 129 0.00086 11.5 1.8 2 2 0.00012 0.0079 8.4 0.1 50 87 90 128 50 135 0.79 # 78 # 494 # -1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.357 4_5 - 229 HTH_45 PF14947.1 77 5.8e-05 15.2 0.1 1 2 1.1e-05 0.0007 11.7 0.0 10 53 29 76 26 97 0.75 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_5 - 229 HTH_45 PF14947.1 77 5.8e-05 15.2 0.1 2 2 0.051 3.3 -0.0 0.0 55 65 211 221 198 225 0.79 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 3_7 - 207 NTPase_1 PF03266.10 168 0.00024 13.1 0.1 1 1 1.1e-05 0.00074 11.5 0.0 7 58 10 66 5 94 0.80 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 10_1 - 122 DDE_Tnp_IS1 PF03400.8 131 6.4e-72 232.1 1.4 1 1 3.3e-73 7.1e-72 232.0 1.4 12 131 2 121 1 121 0.99 # 6 # 371 # -1 # ID=10_1;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.544 1_2 - 98 DDE_Tnp_IS1 PF03400.8 131 5.8e-50 161.1 0.4 1 1 2.9e-51 6.3e-50 161.0 0.4 35 131 1 97 1 97 0.99 # 646 # 939 # -1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_2 - 98 DDE_Tnp_IS1 PF03400.8 131 1.5e-48 156.5 0.2 1 1 7.7e-50 1.7e-48 156.4 0.2 35 131 1 97 1 97 0.99 # 1889 # 2182 # -1 # ID=2_2;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 2_3 - 92 zinc_ribbon_5 PF13719.1 37 4.7e-06 18.5 2.8 1 1 1.8e-07 1.2e-05 17.2 2.8 3 36 6 40 5 41 0.83 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_7 - 207 ATP_bind_1 PF03029.12 238 3e-05 15.9 0.0 1 1 8.4e-07 5.4e-05 15.1 0.0 6 42 12 48 10 74 0.85 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 1_11 - 268 DDE_Tnp_IS240 PF13610.1 140 3.3e-10 32.4 0.2 1 1 7.8e-12 5e-10 31.8 0.2 2 139 110 251 109 252 0.88 # 17829 # 18632 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_12 - 95 HTH_26 PF13443.1 63 9.7e-05 14.9 0.0 1 1 2.8e-06 0.00018 14.0 0.0 6 32 18 44 16 50 0.90 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 7_2 - 647 Toprim_Crpt PF13342.1 62 3.4e-19 60.6 2.1 1 1 5.2e-21 3.4e-19 60.6 2.1 2 60 582 640 581 642 0.92 # 181 # 2121 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.465 1_6 - 1226 KAP_NTPase PF07693.9 325 5.3e-05 14.6 0.0 1 1 2.6e-06 0.00017 12.9 0.0 15 71 62 152 50 224 0.82 # 3798 # 7475 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_12 - 95 HTH_17 PF12728.2 51 2.3e-06 20.1 0.1 1 1 1.6e-07 5.3e-06 19.0 0.0 2 23 23 44 22 53 0.93 # 18680 # 18964 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 3_8 - 215 HTH_17 PF12728.2 51 3.8e-05 16.2 0.0 1 2 0.019 0.63 2.7 0.0 16 29 89 102 88 112 0.85 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 3_8 - 215 HTH_17 PF12728.2 51 3.8e-05 16.2 0.0 2 2 7.3e-05 0.0024 10.5 0.0 5 27 187 209 185 213 0.89 # 7412 # 8056 # 1 # ID=3_8;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.488 2_3 - 92 Zn_Tnp_IS1595 PF12760.2 46 6.8e-05 15.0 2.1 1 1 3.8e-06 0.00012 14.2 2.1 21 46 8 38 4 38 0.79 # 2311 # 2586 # -1 # ID=2_3;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 7_2 - 647 Zn_Tnp_IS1595 PF12760.2 46 0.0018 10.4 1.9 1 2 0.056 1.8 0.8 0.0 2 16 383 397 382 401 0.85 # 181 # 2121 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.465 7_2 - 647 Zn_Tnp_IS1595 PF12760.2 46 0.0018 10.4 1.9 2 2 0.00058 0.019 7.2 1.5 21 44 564 584 560 586 0.88 # 181 # 2121 # 1 # ID=7_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.465 3_4 - 266 DDE_Tnp_1_5 PF13737.1 112 5.5e-48 154.1 0.0 1 1 4.3e-49 1.4e-47 152.8 0.0 1 112 19 130 19 130 0.95 # 5071 # 5868 # -1 # ID=3_4;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 8_1 - 323 DDE_Tnp_1_5 PF13737.1 112 2.5e-47 152.0 0.1 1 2 1.1e-47 3.6e-46 148.3 0.0 1 112 34 145 34 145 0.96 # 34 # 1002 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 8_1 - 323 DDE_Tnp_1_5 PF13737.1 112 2.5e-47 152.0 0.1 2 2 0.067 2.2 0.8 0.0 42 67 278 305 249 312 0.82 # 34 # 1002 # 1 # ID=8_1;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.525 4_5 - 229 MarR_2 PF12802.2 62 5.2e-05 15.2 0.1 1 1 4.1e-06 0.00013 13.9 0.1 9 55 29 73 21 78 0.83 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_9 - 42 MarR_2 PF12802.2 62 6.3e-05 15.0 0.0 1 1 2e-06 6.4e-05 14.9 0.0 5 46 3 40 1 41 0.85 # 6449 # 6574 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.421 4_5 - 229 HTH_5 PF01022.15 47 5.3e-11 34.4 0.1 1 1 1.8e-12 1.2e-10 33.3 0.1 3 46 26 70 24 71 0.92 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 4_5 - 229 TrmB PF01978.14 68 7.3e-08 24.4 0.0 1 1 4.8e-09 1.6e-07 23.4 0.0 11 62 28 79 26 83 0.93 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 3_2 - 186 TrmB PF01978.14 68 3.6e-05 15.8 0.0 1 1 2.3e-06 7.4e-05 14.8 0.0 19 44 155 180 150 181 0.89 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_2 - 223 UPF0122 PF04297.9 101 3.1e-05 16.3 1.4 1 1 1.1e-06 7.3e-05 15.1 1.4 3 76 29 102 26 125 0.83 # 507 # 1175 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.326 3_7 - 207 AAA_10 PF12846.2 304 8.5e-06 17.6 0.0 1 1 2.3e-07 1.5e-05 16.8 0.0 11 47 12 50 10 69 0.82 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 4_5 - 229 HTH_20 PF12840.2 61 8.2e-13 40.3 0.2 1 1 1e-13 2.2e-12 39.0 0.1 3 61 18 76 16 76 0.94 # 3176 # 3862 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.419 3_2 - 186 HTH_20 PF12840.2 61 1.3e-06 20.5 0.2 1 2 0.011 0.24 3.6 0.0 33 52 8 27 4 28 0.91 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_2 - 186 HTH_20 PF12840.2 61 1.3e-06 20.5 0.2 2 2 2.7e-05 0.00059 12.0 0.1 3 43 110 177 108 180 0.91 # 1320 # 1877 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_4 - 208 HTH_20 PF12840.2 61 0.00039 12.6 0.0 1 1 4.1e-05 0.00089 11.4 0.0 21 46 21 46 12 61 0.84 # 2575 # 3198 # 1 # ID=4_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.402 6_6 - 74 Dimerisation PF08100.6 51 6.1e-05 15.2 0.5 1 1 1.4e-06 9.1e-05 14.6 0.1 15 47 28 65 26 66 0.81 # 3533 # 3754 # 1 # ID=6_6;partial=01;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.441 3_7 - 207 ArsA_ATPase PF02374.10 305 1.9e-08 26.0 0.2 1 1 4.8e-10 3.1e-08 25.2 0.2 5 45 6 46 1 66 0.90 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 AAA_31 PF13614.1 157 1.1e-08 27.4 0.3 1 2 1.9e-08 6.1e-07 21.8 0.0 1 39 2 40 2 57 0.93 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 3_7 - 207 AAA_31 PF13614.1 157 1.1e-08 27.4 0.3 2 2 0.0093 0.3 3.3 0.0 115 152 74 109 58 114 0.83 # 6506 # 7126 # -1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.462 2_8 - 402 AAA_31 PF13614.1 157 6.2e-05 15.3 0.0 1 1 1.1e-05 0.00035 12.8 0.0 108 147 235 273 230 279 0.86 # 7389 # 8594 # -1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.456 1_10 - 692 IstB_IS21 PF01695.12 178 9.2e-05 14.2 0.0 1 1 3.1e-06 0.0002 13.1 0.0 41 63 227 249 210 252 0.86 # 15646 # 17721 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.447 2_6 - 424 DNA_pol_lambd_f PF10391.4 52 3.7e-05 15.6 0.2 1 1 4.5e-06 0.00029 12.7 0.0 5 29 182 206 178 217 0.87 # 5062 # 6333 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_11 - 268 HTH_21 PF13276.1 60 2.6e-14 45.3 2.0 1 1 4e-16 2.6e-14 45.3 2.0 3 55 27 78 24 86 0.91 # 17829 # 18632 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/147b3730-08fc-4e67-84ad-b8d8809d8735 # Target file: checkm_output/bins/pm1687/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1687/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/147b3730-08fc-4e67-84ad-b8d8809d8735 checkm_output/bins/pm1687/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:49:25 2017 # [ok]