# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 112 ABC_tran PF00005.22 137 4e-08 22.6 0.0 1 1 7.4e-09 4.4e-08 22.5 0.0 11 41 32 62 22 109 0.74 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 AAA_23 PF13476.1 202 4.2e-08 22.6 0.4 1 1 8.2e-09 4.9e-08 22.4 0.4 19 78 32 95 14 112 0.58 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_6 - 554 SMC_N PF02463.14 220 1.4e-07 19.8 2.0 1 1 4.7e-08 1.4e-07 19.8 0.4 88 203 41 207 3 222 0.69 # 3685 # 5346 # -1 # ID=1_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_1 - 112 SMC_N PF02463.14 220 5.9e-07 17.8 0.2 1 1 2e-07 6.1e-07 17.8 0.2 2 57 13 65 12 109 0.77 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_6 - 554 AAA_21 PF13304.1 303 7.4e-21 64.2 2.9 1 1 2.5e-21 7.4e-21 64.2 2.9 128 302 48 206 4 208 0.66 # 3685 # 5346 # -1 # ID=1_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_1 - 112 AAA_21 PF13304.1 303 4.4e-07 19.0 0.3 1 1 2e-07 5.9e-07 18.6 0.3 1 61 34 94 34 104 0.79 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 AAA_29 PF13555.1 62 7.1e-07 17.8 0.0 1 1 1.7e-07 1e-06 17.3 0.0 17 56 27 65 16 71 0.72 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 TIGR00611 TIGR00611 365 1.9e-06 15.8 0.0 1 1 3.1e-07 1.9e-06 15.8 0.0 21 47 30 56 11 104 0.83 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 DUF258 PF03193.11 161 1.5e-06 16.4 0.0 1 1 3e-07 1.8e-06 16.1 0.0 31 60 28 57 4 81 0.79 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 NACHT PF05729.7 166 1.8e-06 16.6 0.0 1 1 3.7e-07 2.2e-06 16.3 0.0 3 61 35 98 33 110 0.70 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 AAA_15 PF13175.1 415 1.3e-07 19.8 6.7 1 1 2.4e-08 1.4e-07 19.7 6.7 11 109 17 104 9 112 0.58 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 1_1 - 112 TIGR00634 TIGR00634 563 1.5e-05 12.6 0.0 1 1 2.6e-06 1.6e-05 12.6 0.0 2 53 13 63 12 90 0.81 # 2 # 337 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.312 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7717ca70-6d7c-40e9-b100-d3dbb36ef9b4 # Target file: checkm_output/bins/pm1641/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1641/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7717ca70-6d7c-40e9-b100-d3dbb36ef9b4 checkm_output/bins/pm1641/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:48:24 2017 # [ok]