# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_68 - 562 K_oxygenase PF13434.1 341 5.4e-06 18.9 0.4 1 3 0.0064 0.93 1.7 0.3 189 223 97 129 86 132 0.76 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 K_oxygenase PF13434.1 341 5.4e-06 18.9 0.4 2 3 1.9e-06 0.00028 13.3 0.0 130 233 217 311 200 342 0.78 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 K_oxygenase PF13434.1 341 5.4e-06 18.9 0.4 3 3 0.019 2.8 0.1 0.0 129 160 333 366 313 378 0.68 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_30 - 91 HTH_IclR PF09339.5 52 4.2e-06 19.8 0.0 1 1 1.6e-07 7.6e-06 18.9 0.0 4 43 9 47 8 49 0.92 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 7_2 - 66 HTH_IclR PF09339.5 52 7.5e-05 15.7 1.1 1 1 1.7e-06 8.4e-05 15.6 0.3 12 46 26 60 24 60 0.88 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_11 - 98 HTH_IclR PF09339.5 52 0.0012 11.9 0.0 1 1 6.2e-05 0.003 10.6 0.0 25 49 38 62 28 64 0.95 # 4553 # 4846 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_42 - 91 HTH_35 PF13693.1 78 2e-16 53.0 0.2 1 1 1.8e-18 2.6e-16 52.7 0.2 7 71 20 83 15 89 0.89 # 22922 # 23194 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 2_41 - 102 HTH_AsnC-type PF13404.1 42 1.5e-05 17.9 0.0 1 1 1.9e-07 2.8e-05 17.1 0.0 20 42 36 58 30 58 0.91 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_29 - 212 N6_Mtase PF02384.11 311 5.4e-07 22.3 0.0 1 1 5.9e-09 8.6e-07 21.7 0.0 3 97 71 166 69 201 0.72 # 22925 # 23560 # 1 # ID=2_29;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.2e-07 24.8 0.0 1 2 3.8e-08 1.9e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.2e-07 24.8 0.0 2 2 0.042 2 1.2 0.0 176 204 481 509 472 510 0.86 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 FtsK_SpoIIIE PF01580.13 205 7.6e-07 22.2 0.1 1 1 4e-08 1.9e-06 20.9 0.1 33 85 254 304 208 506 0.65 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_20 - 206 FtsK_SpoIIIE PF01580.13 205 0.0011 11.9 0.2 1 1 7.1e-05 0.0034 10.3 0.0 34 53 4 23 1 28 0.83 # 16978 # 17595 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_42 - 91 HTH_38 PF13936.1 44 8.1e-05 15.6 0.0 1 2 6.5e-05 0.0047 10.0 0.1 9 39 16 47 14 49 0.87 # 22922 # 23194 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 1_42 - 91 HTH_38 PF13936.1 44 8.1e-05 15.6 0.0 2 2 0.0062 0.45 3.6 0.0 25 35 59 69 53 72 0.92 # 22922 # 23194 # -1 # ID=1_42;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.502 2_31 - 394 HTH_38 PF13936.1 44 0.00056 12.9 0.0 1 1 1.5e-05 0.0011 12.0 0.0 5 33 120 149 116 157 0.83 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_41 - 102 SpoIIID PF12116.3 82 0.0013 12.1 0.3 1 1 3.4e-05 0.005 10.3 0.3 10 38 23 52 18 83 0.81 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_68 - 562 FAD_oxidored PF12831.2 428 3.4e-06 19.7 4.0 1 2 2.3e-08 3.4e-06 19.7 4.0 2 41 101 139 100 159 0.83 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 FAD_oxidored PF12831.2 428 3.4e-06 19.7 4.0 2 2 0.021 3 0.2 0.0 85 119 306 339 260 364 0.71 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_14 - 622 MobB PF03205.9 140 0.00076 12.6 0.0 1 1 1.7e-05 0.0025 10.9 0.0 4 34 176 206 175 214 0.90 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_47 - 504 UvrD-helicase PF00580.16 315 7.9e-17 54.9 3.9 1 2 2.9e-06 0.00042 13.1 0.1 2 38 8 44 7 64 0.81 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 UvrD-helicase PF00580.16 315 7.9e-17 54.9 3.9 2 2 3.4e-15 4.9e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_41 - 102 HTH_34 PF13601.1 80 0.00018 15.0 0.1 1 1 9.8e-06 0.00071 13.1 0.1 6 78 25 92 21 93 0.80 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 7_2 - 66 HTH_34 PF13601.1 80 0.00053 13.5 0.0 1 1 8.4e-06 0.00061 13.3 0.0 2 42 18 60 17 65 0.87 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_10 - 101 MarR PF01047.17 59 7.3e-05 15.9 0.0 1 1 1.9e-06 0.00014 15.0 0.0 9 37 33 61 32 63 0.93 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_41 - 102 MarR PF01047.17 59 0.00038 13.6 0.0 1 1 8.2e-06 0.00059 13.0 0.0 15 44 31 60 19 60 0.79 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_41 - 102 HTH_Tnp_4 PF13613.1 53 0.00012 15.0 0.0 1 1 1.3e-06 0.00018 14.4 0.0 18 47 32 61 31 67 0.89 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_49 - 347 DUF3584 PF12128.3 1201 0.024 5.3 51.1 1 2 0.0051 0.74 0.4 32.3 377 534 86 242 42 246 0.65 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 DUF3584 PF12128.3 1201 0.024 5.3 51.1 2 2 2e-05 0.0029 8.3 20.6 613 709 225 327 220 345 0.80 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_68 - 562 Pyr_redox_3 PF13738.1 203 9.4e-19 61.7 0.1 1 3 3.1e-06 0.00044 13.7 0.1 167 199 98 130 70 144 0.84 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 Pyr_redox_3 PF13738.1 203 9.4e-19 61.7 0.1 2 3 6.4e-09 9.3e-07 22.5 0.0 115 201 219 304 172 306 0.78 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 Pyr_redox_3 PF13738.1 203 9.4e-19 61.7 0.1 3 3 1e-08 1.5e-06 21.8 0.0 88 155 316 378 308 431 0.85 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 NAD_binding_7 PF13241.1 103 1.2e-05 18.9 2.1 1 2 6.2e-05 0.009 9.7 0.1 9 38 100 129 97 164 0.90 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 NAD_binding_7 PF13241.1 103 1.2e-05 18.9 2.1 2 2 0.00024 0.035 7.8 0.1 8 41 271 307 264 384 0.68 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_14 - 622 DUF853 PF05872.7 504 1.2e-06 20.5 0.0 1 1 1.4e-08 2e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_38 - 226 TetR_N PF00440.18 47 5.1e-20 64.4 0.1 1 2 6.9e-21 1e-18 60.2 0.0 2 47 19 64 18 64 0.97 # 29791 # 30468 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 2_38 - 226 TetR_N PF00440.18 47 5.1e-20 64.4 0.1 2 2 0.013 1.8 1.8 0.1 1 16 179 194 179 196 0.91 # 29791 # 30468 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_47 - 504 AAA_19 PF13245.1 76 2.3e-09 30.4 0.0 1 1 4.2e-11 6.1e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_32 - 262 CbiA PF01656.18 195 1.7e-30 99.3 0.0 1 1 3e-32 2.2e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 4_1 - 624 CbiA PF01656.18 195 0.00043 13.1 0.0 1 1 1.1e-05 0.0008 12.3 0.0 3 63 263 351 262 402 0.59 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 1_29 - 372 tRNA_Me_trans PF03054.11 356 5.5e-05 15.2 0.0 1 2 1.1e-06 0.00017 13.6 0.0 2 71 52 122 51 144 0.74 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_29 - 372 tRNA_Me_trans PF03054.11 356 5.5e-05 15.2 0.0 2 2 0.042 6 -1.4 0.0 193 224 274 305 236 311 0.83 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_31 - 394 Sigma70_r4_2 PF08281.7 54 9.1e-05 15.4 0.0 1 2 0.027 4 0.5 0.0 22 38 115 131 103 131 0.76 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_31 - 394 Sigma70_r4_2 PF08281.7 54 9.1e-05 15.4 0.0 2 2 1.8e-06 0.00026 13.9 0.0 17 48 127 158 122 161 0.91 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_33 - 355 Rep_3 PF01051.16 222 1.7e-07 24.5 0.0 1 1 2.8e-09 4e-07 23.2 0.0 43 221 127 310 101 311 0.83 # 17034 # 18098 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 6_1 - 234 rve PF00665.21 120 4.7e-13 42.8 0.1 1 2 0.015 2.1 1.9 0.0 78 102 27 49 6 54 0.84 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 6_1 - 234 rve PF00665.21 120 4.7e-13 42.8 0.1 2 2 6e-14 8.7e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_10 - 101 Fe_dep_repress PF01325.14 60 0.00019 14.8 0.1 1 1 3e-06 0.00043 13.7 0.1 23 42 42 61 23 63 0.84 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_52 - 290 TIGR00573 TIGR00573 217 3.3e-16 52.5 0.0 1 1 3.6e-18 5.2e-16 51.9 0.0 10 180 107 275 101 288 0.76 # 35204 # 36073 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_47 - 504 AAA_30 PF13604.1 196 7.1e-08 25.7 0.1 1 2 9.2e-07 0.00013 15.0 0.0 19 80 20 81 11 109 0.77 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 AAA_30 PF13604.1 196 7.1e-08 25.7 0.1 2 2 0.00017 0.025 7.5 0.0 115 133 211 229 174 278 0.75 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_68 - 562 F420_oxidored PF03807.12 96 0.019 8.9 6.4 1 3 0.0019 0.28 5.2 1.1 2 33 101 128 100 132 0.87 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 F420_oxidored PF03807.12 96 0.019 8.9 6.4 2 3 0.0046 0.67 3.9 0.2 1 35 272 302 272 338 0.90 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 F420_oxidored PF03807.12 96 0.019 8.9 6.4 3 3 0.082 12 -0.1 0.0 23 52 351 381 341 388 0.78 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 6_1 - 234 HTH_Tnp_1 PF01527.15 76 0.00036 13.9 0.3 1 1 5.4e-06 0.00078 12.9 0.3 4 51 6 58 4 63 0.79 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_29 - 372 TIGR02432 TIGR02432 189 5.9e-05 16.2 0.1 1 2 1.1e-05 0.0016 11.5 0.0 1 58 52 109 52 119 0.85 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_29 - 372 TIGR02432 TIGR02432 189 5.9e-05 16.2 0.1 2 2 0.0084 1.2 2.1 0.0 140 165 235 260 207 262 0.76 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_14 - 622 TraG-D_C PF12696.2 128 4.1e-15 49.2 0.0 1 1 1e-16 7.4e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 TraG-D_C PF12696.2 128 9.6e-07 22.2 0.0 1 1 2.8e-08 2e-06 21.1 0.0 17 75 482 536 464 542 0.84 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 6_1 - 234 DDE_3 PF13358.1 146 0.00098 12.3 0.0 1 1 2.1e-05 0.003 10.7 0.0 32 90 82 141 59 146 0.87 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_32 - 262 MipZ PF09140.6 261 2.6e-10 33.2 0.0 1 2 6.6e-10 9.6e-08 24.8 0.0 2 52 4 55 3 81 0.83 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_32 - 262 MipZ PF09140.6 261 2.6e-10 33.2 0.0 2 2 0.00031 0.046 6.2 0.0 89 122 117 150 89 166 0.74 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 5_2 - 319 DDE_Tnp_1 PF01609.16 213 1.9e-24 79.8 0.1 1 1 1e-25 5e-24 78.4 0.0 6 169 128 310 123 318 0.92 # 187 # 1143 # 1 # ID=5_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 11_1 - 82 DDE_Tnp_1 PF01609.16 213 6.7e-09 29.0 0.0 1 1 1.4e-10 6.7e-09 29.0 0.0 150 211 6 82 1 82 0.80 # 2 # 247 # -1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 3_8 - 103 DDE_Tnp_1 PF01609.16 213 4.3e-07 23.1 0.2 1 1 1.5e-08 7.1e-07 22.4 0.0 170 213 1 44 1 44 0.98 # 10179 # 10487 # -1 # ID=3_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 2_3 - 439 DivIC PF04977.10 80 0.00035 13.5 5.4 1 2 0.00039 0.057 6.4 0.9 26 55 63 92 48 100 0.74 # 1197 # 2513 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_3 - 439 DivIC PF04977.10 80 0.00035 13.5 5.4 2 2 6.6e-05 0.0096 8.9 0.3 21 48 103 130 94 132 0.89 # 1197 # 2513 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 101 Sigma70_r4 PF04545.11 50 0.00018 14.2 0.0 1 1 2.2e-06 0.00032 13.5 0.0 15 42 36 63 35 67 0.88 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_31 - 394 KorB PF08535.5 93 1.2e-31 102.2 0.2 1 1 3e-33 4.3e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_10 - 101 HTH_37 PF13744.1 80 1.5e-11 37.4 0.3 1 1 2.4e-13 1.7e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_41 - 102 HTH_37 PF13744.1 80 0.00049 13.4 0.0 1 1 1e-05 0.00073 12.8 0.0 20 50 22 52 13 60 0.85 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_9 - 221 LexA_DNA_bind PF01726.11 65 0.00064 12.7 0.0 1 1 8.2e-06 0.0012 11.9 0.0 39 62 124 147 118 149 0.87 # 5161 # 5823 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.481 2_30 - 91 Rrf2 PF02082.15 83 0.0008 13.0 0.4 1 1 1.1e-05 0.0016 12.0 0.4 1 52 1 49 1 74 0.86 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_30 - 91 HTH_43 PF09904.4 90 6e-12 38.7 0.0 1 1 4.7e-14 6.8e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_17 - 731 zf-C4_Topoisom PF01396.14 39 1.2e-14 47.0 16.8 1 2 5.3e-08 7.7e-06 18.8 4.7 3 37 636 669 634 671 0.90 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_17 - 731 zf-C4_Topoisom PF01396.14 39 1.2e-14 47.0 16.8 2 2 1.5e-12 2.2e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_30 - 91 HTH_27 PF13463.1 68 0.00073 13.3 0.0 1 1 6.4e-06 0.00092 13.0 0.0 8 44 13 48 9 76 0.78 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_39 - 400 TIGR01394 TIGR01394 594 0.0022 9.3 0.0 1 1 2.2e-05 0.0032 8.8 0.0 408 486 267 343 261 354 0.84 # 30547 # 31746 # 1 # ID=2_39;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.628 2_19 - 93 Ribosomal_L2_C PF03947.13 130 0.00072 12.8 0.0 1 1 6.3e-06 0.00091 12.5 0.0 74 111 44 80 24 82 0.86 # 16467 # 16745 # -1 # ID=2_19;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 2_41 - 102 P22_Cro PF14549.1 60 0.00091 12.4 0.1 1 1 1.2e-05 0.0017 11.5 0.1 12 28 36 52 29 57 0.86 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_65 - 145 MerR_1 PF13411.1 69 5.8e-20 64.3 0.0 1 1 1.2e-21 9e-20 63.7 0.0 2 67 9 75 8 77 0.96 # 47476 # 47910 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_70 - 122 MerR_1 PF13411.1 69 6.7e-12 38.5 0.0 1 1 1.3e-13 9.8e-12 38.0 0.0 1 68 4 72 4 73 0.96 # 51145 # 51510 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 4_1 - 624 AAA_16 PF13191.1 185 3e-05 17.5 0.3 1 1 2.1e-06 0.00015 15.2 0.3 20 63 255 298 247 467 0.62 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_20 - 206 AAA_16 PF13191.1 185 6.1e-05 16.5 0.1 1 1 1.3e-06 9.2e-05 15.9 0.1 27 68 11 54 3 168 0.79 # 16978 # 17595 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_47 - 504 AAA_22 PF13401.1 131 4.7e-05 17.0 0.0 1 2 8e-05 0.0039 10.8 0.0 8 68 23 92 17 122 0.63 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 AAA_22 PF13401.1 131 4.7e-05 17.0 0.0 2 2 0.015 0.72 3.4 0.0 82 124 189 225 164 229 0.77 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 622 AAA_22 PF13401.1 131 0.00018 15.1 0.0 1 1 1.2e-05 0.0006 13.4 0.0 3 68 171 231 166 287 0.83 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 AAA_22 PF13401.1 131 0.00093 12.8 0.1 1 2 0.00078 0.038 7.6 0.0 5 27 260 282 255 318 0.82 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 4_1 - 624 AAA_22 PF13401.1 131 0.00093 12.8 0.1 2 2 0.03 1.4 2.5 0.1 88 99 456 474 357 528 0.79 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 1_47 - 504 TIGR01074 TIGR01074 668 1.8e-10 32.7 0.8 1 3 0.0039 0.56 1.4 0.0 8 33 12 38 7 57 0.74 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 TIGR01074 TIGR01074 668 1.8e-10 32.7 0.8 2 3 4.1e-07 6e-05 14.5 0.0 205 254 192 238 179 271 0.87 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 TIGR01074 TIGR01074 668 1.8e-10 32.7 0.8 3 3 7.5e-07 0.00011 13.6 0.1 534 614 396 472 347 493 0.80 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_41 - 102 NUMOD1 PF07453.8 37 0.00034 13.9 0.0 1 1 4.8e-06 0.0007 12.9 0.0 20 35 37 52 30 54 0.91 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_30 - 91 HTH_9 PF08221.6 62 0.0004 13.7 0.0 1 1 4.4e-06 0.00064 13.0 0.0 19 51 14 46 11 47 0.90 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_68 - 562 Pyr_redox PF00070.22 80 2.4e-19 63.0 4.9 1 2 2.2e-06 0.00032 14.6 1.2 2 31 101 130 100 132 0.95 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 Pyr_redox PF00070.22 80 2.4e-19 63.0 4.9 2 2 3.3e-17 4.8e-15 49.2 0.1 1 70 272 340 272 351 0.90 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_41 - 102 HTH_1 PF00126.22 60 2e-24 78.6 0.7 1 1 3.8e-26 2.7e-24 78.2 0.7 4 60 24 80 21 80 0.96 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_30 - 91 HTH_1 PF00126.22 60 5.2e-05 16.4 0.0 1 1 1.1e-06 7.9e-05 15.8 0.0 22 51 31 61 30 76 0.79 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_68 - 562 HI0933_like PF03486.9 409 1.5e-08 26.9 5.3 1 2 9.7e-07 0.00014 13.8 2.9 2 33 100 131 99 139 0.91 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 HI0933_like PF03486.9 409 1.5e-08 26.9 5.3 2 2 1.7e-06 0.00024 13.0 0.0 83 164 286 363 281 384 0.86 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 6_1 - 234 HTH_32 PF13565.1 77 1.9e-06 22.1 0.2 1 1 5.6e-08 8.1e-06 20.1 0.0 26 76 5 50 2 51 0.83 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_47 - 504 TIGR00609 TIGR00609 1175 6.2e-12 37.5 1.1 1 4 0.0098 1.4 -0.2 0.0 13 27 23 37 13 47 0.82 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 TIGR00609 TIGR00609 1175 6.2e-12 37.5 1.1 2 4 1.4e-10 2e-08 25.8 0.0 368 454 190 270 179 282 0.80 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 TIGR00609 TIGR00609 1175 6.2e-12 37.5 1.1 3 4 0.011 1.5 -0.3 0.0 728 746 412 430 401 437 0.88 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 TIGR00609 TIGR00609 1175 6.2e-12 37.5 1.1 4 4 7.4e-05 0.011 6.8 0.1 789 818 446 475 417 502 0.70 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_44 - 498 A2L_zn_ribbon PF08792.5 33 0.012 8.6 3.6 1 2 0.004 0.59 3.2 0.5 5 29 75 100 73 101 0.85 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_44 - 498 A2L_zn_ribbon PF08792.5 33 0.012 8.6 3.6 2 2 0.00068 0.098 5.7 0.1 2 13 439 450 439 453 0.85 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_10 - 101 HTH_3 PF01381.17 55 6.6e-08 25.8 0.1 1 1 6.6e-10 9.6e-08 25.3 0.1 1 44 33 76 33 84 0.86 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 5_2 - 319 DDE_Tnp_1_4 PF13701.1 449 5.2e-15 47.9 0.4 1 1 1.3e-15 6.1e-14 44.4 0.4 137 265 122 251 3 286 0.82 # 187 # 1143 # 1 # ID=5_2;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 3_8 - 103 DDE_Tnp_1_4 PF13701.1 449 1.3e-13 43.3 0.2 1 1 2.8e-15 1.4e-13 43.2 0.2 339 438 1 100 1 102 0.96 # 10179 # 10487 # -1 # ID=3_8;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 11_1 - 82 DDE_Tnp_1_4 PF13701.1 449 4.5e-05 15.1 0.0 1 1 9.3e-07 4.5e-05 15.1 0.0 338 370 40 72 14 82 0.79 # 2 # 247 # -1 # ID=11_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 6_1 - 234 HTH_23 PF13384.1 50 8.7e-06 18.8 0.7 1 2 0.078 2.3 1.6 0.0 7 27 11 35 7 36 0.69 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 6_1 - 234 HTH_23 PF13384.1 50 8.7e-06 18.8 0.7 2 2 9.3e-06 0.00027 14.0 0.1 28 42 41 55 40 62 0.87 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_46 - 246 HTH_23 PF13384.1 50 1.8e-05 17.8 0.4 1 1 6.1e-07 1.8e-05 17.8 0.4 2 37 171 206 170 216 0.90 # 36617 # 37354 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 2_31 - 394 HTH_23 PF13384.1 50 0.00018 14.6 0.2 1 1 4.3e-05 0.0013 11.9 0.0 4 35 122 154 119 161 0.81 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_41 - 102 HTH_23 PF13384.1 50 0.00054 13.1 0.0 1 1 3.8e-05 0.0011 12.1 0.0 15 40 31 56 25 65 0.79 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_38 - 226 HTH_23 PF13384.1 50 0.0013 11.9 0.2 1 1 0.00024 0.007 9.5 0.0 10 35 22 51 14 64 0.75 # 29791 # 30468 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 2_46 - 246 HTH_7 PF02796.10 45 1.2e-07 25.0 0.1 1 1 1.9e-09 2.7e-07 23.8 0.1 8 44 173 209 168 210 0.87 # 36617 # 37354 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 2_44 - 498 Ribosomal_S27e PF01667.12 55 0.00076 12.5 1.1 1 1 1.4e-05 0.0021 11.1 1.1 5 33 71 99 68 104 0.90 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_10 - 101 HTH_19 PF12844.2 64 5.3e-08 26.3 0.0 1 1 5.2e-10 7.6e-08 25.8 0.0 4 52 33 81 31 86 0.95 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_44 - 498 zinc_ribbon_4 PF13717.1 36 0.033 7.4 5.2 1 2 0.00049 0.071 6.3 0.1 2 14 73 85 73 87 0.84 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_44 - 498 zinc_ribbon_4 PF13717.1 36 0.033 7.4 5.2 2 2 0.0064 0.92 2.8 0.0 5 14 95 104 94 111 0.81 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_68 - 562 GIDA PF01134.17 392 3e-06 19.7 2.9 1 4 2.1e-08 3e-06 19.7 2.9 1 52 100 153 100 166 0.88 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 GIDA PF01134.17 392 3e-06 19.7 2.9 2 4 0.074 11 -1.9 0.0 3 32 274 303 272 335 0.85 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 GIDA PF01134.17 392 3e-06 19.7 2.9 3 4 0.067 9.7 -1.7 0.0 128 167 339 363 311 382 0.57 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 GIDA PF01134.17 392 3e-06 19.7 2.9 4 4 0.03 4.4 -0.6 0.0 350 385 391 426 382 430 0.76 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_52 - 290 DNA_pol_A_exo1 PF01612.15 176 0.00028 13.8 0.2 1 1 1.3e-05 0.002 11.1 0.2 9 96 93 202 85 272 0.75 # 35204 # 36073 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_68 - 562 NAD_binding_8 PF13450.1 68 0.0001 15.8 1.2 1 2 6.9e-07 0.0001 15.8 1.2 1 35 103 136 103 155 0.91 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 NAD_binding_8 PF13450.1 68 0.0001 15.8 1.2 2 2 0.091 13 -0.6 0.1 1 25 275 299 275 304 0.78 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 6_1 - 234 DDE_Tnp_IS66 PF03050.9 271 3.3e-12 39.6 0.3 1 1 2.9e-14 4.3e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_47 - 504 PhoH PF02562.11 205 3.7e-06 19.7 0.2 1 2 0.0013 0.19 4.3 0.0 22 45 22 45 4 61 0.78 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 PhoH PF02562.11 205 3.7e-06 19.7 0.2 2 2 7.5e-06 0.0011 11.7 0.0 122 168 196 240 193 255 0.83 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 ResIII PF04851.10 184 1.5e-06 21.5 0.0 1 1 5.5e-08 4e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 622 ResIII PF04851.10 184 0.00015 15.0 0.0 1 1 4.2e-06 0.00031 14.0 0.0 23 57 170 206 129 214 0.74 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_29 - 372 PAPS_reduct PF01507.14 174 5.1e-12 39.4 0.4 1 2 0.014 2 1.6 0.0 2 17 53 68 52 91 0.76 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_29 - 372 PAPS_reduct PF01507.14 174 5.1e-12 39.4 0.4 2 2 4.4e-13 6.4e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_14 - 622 TrwB_AAD_bind PF10412.4 386 2.9e-19 62.3 0.0 1 2 8.9e-13 6.4e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 TrwB_AAD_bind PF10412.4 386 2.9e-19 62.3 0.0 2 2 6.9e-10 5e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 TrwB_AAD_bind PF10412.4 386 1.6e-08 26.9 0.0 1 2 1e-05 0.00074 11.6 0.0 6 72 250 325 246 329 0.85 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 4_1 - 624 TrwB_AAD_bind PF10412.4 386 1.6e-08 26.9 0.0 2 2 3.8e-06 0.00028 13.0 0.1 231 302 450 521 420 539 0.66 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_32 - 262 TIGR01968 TIGR01968 261 7.4e-09 28.4 0.1 1 2 5e-07 7.3e-05 15.3 0.1 2 39 3 41 2 45 0.84 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_32 - 262 TIGR01968 TIGR01968 261 7.4e-09 28.4 0.1 2 2 9e-06 0.0013 11.2 0.0 105 135 120 150 111 218 0.80 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 290 TIGR01406 TIGR01406 231 1.6e-18 60.3 0.0 1 1 1.5e-20 2.2e-18 59.8 0.0 3 179 107 279 105 288 0.85 # 35204 # 36073 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 2_14 - 622 DUF87 PF01935.12 229 1.2e-08 28.4 0.0 1 1 4.3e-10 3.1e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 DUF87 PF01935.12 229 3.5e-08 26.9 0.2 1 1 9.2e-10 6.7e-08 26.0 0.2 23 154 259 395 240 468 0.71 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 6_1 - 234 HTH_28 PF13518.1 52 8.3e-05 16.0 1.2 1 1 7.6e-06 0.00037 14.0 1.2 22 36 40 54 13 55 0.76 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 2_46 - 246 HTH_28 PF13518.1 52 0.00045 13.7 0.7 1 1 9.4e-06 0.00045 13.7 0.7 1 33 175 207 175 209 0.95 # 36617 # 37354 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_39 - 95 HTH_28 PF13518.1 52 0.00054 13.4 1.1 1 2 0.081 3.9 1.1 0.1 23 33 2 13 1 17 0.79 # 21489 # 21773 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.495 1_39 - 95 HTH_28 PF13518.1 52 0.00054 13.4 1.1 2 2 5.1e-05 0.0025 11.3 0.2 18 49 28 58 14 63 0.85 # 21489 # 21773 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.495 2_38 - 226 HTH_Tnp_1_2 PF13022.1 142 0.0011 12.1 0.0 1 1 1.2e-05 0.0017 11.6 0.0 22 77 24 73 5 79 0.76 # 29791 # 30468 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_65 - 145 MerR-DNA-bind PF09278.6 65 5.1e-21 68.3 0.9 1 1 1.6e-22 1.2e-20 67.2 0.9 1 65 51 113 51 113 0.95 # 47476 # 47910 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_70 - 122 MerR-DNA-bind PF09278.6 65 0.0011 12.9 4.4 1 1 2.2e-05 0.0016 12.3 4.4 1 64 47 108 47 109 0.95 # 51145 # 51510 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_41 - 102 HTH_24 PF13412.1 48 1.2e-06 21.3 0.0 1 1 5e-08 1.8e-06 20.7 0.0 16 44 32 60 22 60 0.86 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 7_2 - 66 HTH_24 PF13412.1 48 2.2e-05 17.3 0.0 1 1 9.3e-07 3.4e-05 16.7 0.0 4 45 17 60 15 61 0.93 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_30 - 91 HTH_24 PF13412.1 48 2.6e-05 17.0 0.1 1 1 1.1e-06 4e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_31 - 394 HTH_24 PF13412.1 48 2.8e-05 16.9 0.3 1 2 0.00064 0.023 7.6 0.2 1 29 104 131 104 131 0.90 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_31 - 394 HTH_24 PF13412.1 48 2.8e-05 16.9 0.3 2 2 0.00094 0.034 7.0 0.0 20 41 139 160 138 161 0.90 # 23934 # 25115 # -1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 4_1 - 624 Guanylate_kin PF00625.16 183 8.7e-05 15.4 0.1 1 3 0.0027 0.39 3.5 0.0 3 26 260 283 258 313 0.85 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 4_1 - 624 Guanylate_kin PF00625.16 183 8.7e-05 15.4 0.1 2 3 0.007 1 2.2 0.1 75 115 404 445 389 510 0.84 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 4_1 - 624 Guanylate_kin PF00625.16 183 8.7e-05 15.4 0.1 3 3 0.0007 0.1 5.4 0.0 75 131 522 578 502 585 0.87 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_41 - 102 HTH_30 PF13556.1 59 9.8e-06 18.6 0.1 1 1 1e-07 1.5e-05 18.0 0.1 10 44 31 65 24 75 0.88 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_52 - 290 TIGR01298 TIGR01298 200 2.6e-07 23.7 1.1 1 1 5.8e-08 8.4e-06 18.8 1.1 1 196 97 276 97 280 0.83 # 35204 # 36073 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 1_68 - 562 TIGR01292 TIGR01292 300 2.6e-19 62.2 3.6 1 2 1.5e-05 0.0022 9.9 1.3 2 39 100 137 99 143 0.90 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 TIGR01292 TIGR01292 300 2.6e-19 62.2 3.6 2 2 1.9e-18 2.8e-16 52.3 0.0 142 296 271 425 212 427 0.80 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_14 - 622 DEAD PF00270.24 169 3.4e-05 16.8 0.0 1 1 8.7e-07 6.3e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 DEAD PF00270.24 169 0.001 12.0 0.4 1 1 7e-05 0.0051 9.7 0.2 13 133 258 434 245 501 0.66 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 1_10 - 101 HTH_31 PF13560.1 64 1.4e-07 25.1 0.0 1 1 1.4e-09 2e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_47 - 504 UvrD_C_2 PF13538.1 104 1.1e-10 35.0 0.0 1 1 3.5e-12 5.1e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_14 - 622 T2SE PF00437.15 272 0.00027 13.3 0.0 1 1 2.9e-06 0.00042 12.6 0.0 116 162 163 206 124 227 0.78 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_68 - 562 FAD_binding_2 PF00890.19 417 7.3e-06 18.4 5.5 1 3 5e-08 7.3e-06 18.4 5.5 2 32 101 131 100 138 0.91 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 FAD_binding_2 PF00890.19 417 7.3e-06 18.4 5.5 2 3 0.026 3.8 -0.4 0.6 146 204 315 366 300 385 0.69 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 FAD_binding_2 PF00890.19 417 7.3e-06 18.4 5.5 3 3 0.011 1.7 0.8 0.1 374 402 375 405 371 418 0.87 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 4_1 - 624 AAA_25 PF13481.1 194 0.00035 13.4 0.0 1 1 1.8e-05 0.00086 12.1 0.0 36 86 262 302 255 342 0.82 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_32 - 262 AAA_25 PF13481.1 194 0.00057 12.7 0.0 1 1 1.8e-05 0.00088 12.1 0.0 42 91 12 51 11 134 0.78 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_14 - 622 AAA_25 PF13481.1 194 0.00057 12.7 0.0 1 1 3.7e-05 0.0018 11.1 0.0 20 137 159 265 145 272 0.78 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 4_1 - 624 Zot PF05707.7 193 0.00099 12.0 0.0 1 1 2.4e-05 0.0035 10.2 0.0 79 132 461 510 425 529 0.80 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 1_47 - 504 Viral_helicase1 PF01443.13 234 1.3e-10 34.6 0.0 1 3 1.4e-05 0.0021 11.0 0.0 2 49 23 73 22 87 0.67 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 Viral_helicase1 PF01443.13 234 1.3e-10 34.6 0.0 2 3 1.8e-05 0.0027 10.7 0.0 56 105 188 234 146 256 0.78 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 Viral_helicase1 PF01443.13 234 1.3e-10 34.6 0.0 3 3 5.2e-05 0.0075 9.2 0.0 176 227 404 462 344 467 0.75 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 AAA_14 PF13173.1 128 2.4e-05 17.7 1.3 1 2 2.5e-05 0.0037 10.6 0.1 11 46 28 62 18 156 0.76 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_47 - 504 AAA_14 PF13173.1 128 2.4e-05 17.7 1.3 2 2 0.0011 0.16 5.3 0.0 51 99 176 227 127 241 0.73 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_30 - 91 Mga PF05043.8 87 0.00037 14.2 0.1 1 1 3.1e-06 0.00046 13.9 0.1 17 55 9 47 2 62 0.89 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_64 - 335 Transposase_20 PF02371.11 87 1.6e-24 79.3 0.2 1 1 2.3e-26 3.4e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 46372 # 47376 # -1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_65 - 145 MerR PF00376.18 38 1.5e-14 46.8 0.1 1 1 3.6e-16 2.6e-14 46.0 0.1 1 38 9 46 9 46 0.99 # 47476 # 47910 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_70 - 122 MerR PF00376.18 38 3.7e-06 19.9 0.0 1 1 8.3e-08 6.1e-06 19.2 0.0 2 38 6 42 5 42 0.89 # 51145 # 51510 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.675 2_14 - 622 ArgK PF03308.11 267 0.00016 13.9 0.0 1 1 1.8e-06 0.00027 13.2 0.0 12 68 158 209 153 214 0.88 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_11 - 98 PaaX PF07848.7 70 0.00015 15.2 0.0 1 1 1.4e-06 0.0002 14.8 0.0 19 70 28 79 10 79 0.88 # 4553 # 4846 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 2_14 - 622 T4SS-DNA_transf PF02534.9 469 3.5e-05 15.9 0.0 1 2 5.2e-07 7.5e-05 14.8 0.0 37 115 168 249 125 365 0.73 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 T4SS-DNA_transf PF02534.9 469 3.5e-05 15.9 0.0 2 2 0.097 14 -2.6 0.0 328 389 494 555 474 572 0.74 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_69 - 213 HTH_15 PF12324.3 77 1.1e-31 101.8 0.0 1 1 1.5e-33 2.2e-31 100.8 0.0 4 77 2 75 1 75 0.98 # 50395 # 51033 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 1_68 - 562 AlaDh_PNT_C PF01262.16 168 1.1e-06 21.8 4.6 1 2 1.5e-06 0.00022 14.2 1.3 3 50 81 128 79 131 0.91 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 AlaDh_PNT_C PF01262.16 168 1.1e-06 21.8 4.6 2 2 9.9e-05 0.014 8.3 0.1 19 63 269 313 260 359 0.86 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_22 - 476 DNA_methylase PF00145.12 335 8.7e-11 34.9 0.0 1 2 2.1e-11 3e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 18307 # 19734 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_22 - 476 DNA_methylase PF00145.12 335 8.7e-11 34.9 0.0 2 2 0.0031 0.45 2.9 0.0 290 330 407 448 341 452 0.73 # 18307 # 19734 # -1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_68 - 562 3HCDH_N PF02737.13 180 0.0044 10.1 6.7 1 2 0.0025 0.36 3.9 2.5 1 30 100 129 100 133 0.93 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 3HCDH_N PF02737.13 180 0.0044 10.1 6.7 2 2 0.00014 0.021 7.9 0.1 2 36 273 307 272 359 0.71 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_29 - 372 ATP_bind_3 PF01171.15 182 0.00022 14.2 0.0 1 2 5.2e-05 0.0076 9.2 0.0 1 59 52 110 52 129 0.78 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_29 - 372 ATP_bind_3 PF01171.15 182 0.00022 14.2 0.0 2 2 0.005 0.73 2.7 0.0 134 161 232 260 207 262 0.72 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_44 - 498 zinc_ribbon_5 PF13719.1 37 0.0031 10.6 2.7 1 2 0.00031 0.045 6.8 0.0 2 14 73 85 72 87 0.83 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_44 - 498 zinc_ribbon_5 PF13719.1 37 0.0031 10.6 2.7 2 2 0.0048 0.7 3.0 0.0 5 14 95 104 94 113 0.81 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_29 - 372 TIGR00420 TIGR00420 351 0.0015 10.5 0.0 1 2 0.00011 0.015 7.2 0.0 2 64 52 110 51 128 0.77 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_29 - 372 TIGR00420 TIGR00420 351 0.0015 10.5 0.0 2 2 0.0073 1.1 1.1 0.0 192 223 274 305 245 313 0.89 # 14430 # 15545 # 1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_68 - 562 Glyco_transf_4 PF13439.1 177 1.1e-05 18.6 0.5 1 1 1.6e-07 2.3e-05 17.6 0.1 13 39 277 303 274 346 0.84 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 6_1 - 234 DDE_Tnp_IS240 PF13610.1 140 1.1e-52 171.2 0.0 1 1 1e-54 1.5e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 3 # 704 # -1 # ID=6_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_8 - 183 HTH_26 PF13443.1 63 0.00013 15.6 0.1 1 2 0.0022 0.32 4.7 0.0 9 48 53 91 45 92 0.86 # 3158 # 3706 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 1_8 - 183 HTH_26 PF13443.1 63 0.00013 15.6 0.1 2 2 0.00018 0.026 8.2 0.0 39 56 163 180 155 182 0.92 # 3158 # 3706 # -1 # ID=1_8;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_17 - 731 Zn-ribbon_8 PF09723.5 42 0.0098 9.3 6.9 1 2 0.0093 0.68 3.5 0.1 23 40 631 647 624 648 0.85 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_17 - 731 Zn-ribbon_8 PF09723.5 42 0.0098 9.3 6.9 2 2 0.0012 0.086 6.3 3.4 20 38 676 693 657 696 0.81 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_44 - 498 Zn-ribbon_8 PF09723.5 42 0.055 7.0 9.5 1 2 0.001 0.074 6.5 5.2 7 35 75 101 75 105 0.89 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_44 - 498 Zn-ribbon_8 PF09723.5 42 0.055 7.0 9.5 2 2 0.033 2.4 1.7 0.1 25 37 439 450 430 459 0.71 # 34692 # 36185 # -1 # ID=2_44;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_30 - 91 HTH_11 PF08279.7 55 0.00051 13.1 0.0 1 1 4.7e-06 0.00069 12.7 0.0 1 46 9 54 9 70 0.77 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 7_2 - 66 MarR_2 PF12802.2 62 9e-06 18.8 0.1 1 1 3e-07 1.5e-05 18.1 0.1 12 49 23 60 4 60 0.84 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_10 - 101 MarR_2 PF12802.2 62 1e-05 18.6 0.0 1 1 4.3e-07 2.1e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_41 - 102 MarR_2 PF12802.2 62 0.00011 15.2 0.1 1 1 3.3e-06 0.00016 14.8 0.1 22 47 34 59 22 80 0.86 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 7_2 - 66 HTH_5 PF01022.15 47 3.6e-10 32.8 0.2 1 1 7.5e-12 3.6e-10 32.8 0.2 1 43 15 60 15 60 0.93 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_30 - 91 HTH_5 PF01022.15 47 4e-06 19.9 0.0 1 1 1.2e-07 5.8e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_10 - 101 HTH_5 PF01022.15 47 0.00064 12.9 0.0 1 1 2.9e-05 0.0014 11.7 0.0 15 34 41 60 33 60 0.84 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 7_2 - 66 TrmB PF01978.14 68 0.00012 15.3 0.0 1 1 2.2e-06 0.00016 14.8 0.0 12 50 20 60 17 61 0.92 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_30 - 91 TrmB PF01978.14 68 0.0013 11.9 0.0 1 1 2.8e-05 0.002 11.3 0.0 19 48 19 48 11 52 0.85 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_68 - 562 Pyr_redox_2 PF07992.9 201 1.2e-41 136.3 0.0 1 1 2.8e-43 4.1e-41 134.5 0.0 1 199 100 407 100 409 0.96 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_10 - 101 HTH_Crp_2 PF13545.1 76 1.8e-05 17.9 0.0 1 1 2.1e-07 3e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 4224 # 4526 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_30 - 91 HTH_Mga PF08280.6 59 1.3e-06 21.6 0.0 1 1 1e-08 1.5e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 23613 # 23885 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_68 - 562 DAO PF01266.19 358 1.3e-10 34.0 10.4 1 2 4.6e-08 6.7e-06 18.6 1.4 2 35 101 134 100 161 0.85 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_68 - 562 DAO PF01266.19 358 1.3e-10 34.0 10.4 2 2 1.1e-08 1.7e-06 20.6 0.9 151 205 314 367 302 479 0.80 # 48695 # 50380 # 1 # ID=1_68;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_49 - 347 Seryl_tRNA_N PF02403.17 108 0.038 7.5 46.3 1 5 0.019 2.7 1.5 8.8 39 98 89 152 77 158 0.72 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 Seryl_tRNA_N PF02403.17 108 0.038 7.5 46.3 2 5 0.00084 0.12 5.9 3.1 50 100 146 196 143 199 0.89 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 Seryl_tRNA_N PF02403.17 108 0.038 7.5 46.3 3 5 2.6e-06 0.00038 13.9 12.2 19 100 216 294 201 297 0.85 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 Seryl_tRNA_N PF02403.17 108 0.038 7.5 46.3 4 5 0.00031 0.044 7.3 2.1 62 105 284 327 282 330 0.90 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 Seryl_tRNA_N PF02403.17 108 0.038 7.5 46.3 5 5 0.0059 0.85 3.1 1.6 82 105 304 327 296 345 0.51 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_52 - 290 RNase_T PF00929.19 164 5.7e-23 75.4 0.0 1 1 5.8e-25 8.4e-23 74.9 0.0 1 163 107 264 107 265 0.94 # 35204 # 36073 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.538 4_1 - 624 AAA_10 PF12846.2 304 2.3e-59 194.7 0.2 1 1 5.2e-61 3.8e-59 194.0 0.2 1 297 259 538 259 546 0.93 # 2 # 1873 # 1 # ID=4_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.528 2_14 - 622 AAA_10 PF12846.2 304 1.5e-18 60.6 0.2 1 1 5.7e-20 4.1e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 7847 # 9712 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 7_2 - 66 HTH_20 PF12840.2 61 2.7e-15 49.4 0.5 1 1 7e-17 3.4e-15 49.1 0.5 3 52 9 60 5 60 0.94 # 111 # 308 # -1 # ID=7_2;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 2_41 - 102 HTH_20 PF12840.2 61 1.9e-06 21.1 0.1 1 1 7e-08 3.4e-06 20.3 0.1 16 59 25 69 21 71 0.87 # 32013 # 32318 # -1 # ID=2_41;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_38 - 226 HTH_20 PF12840.2 61 0.00035 13.8 0.1 1 1 5.4e-05 0.0026 11.0 0.0 21 46 30 55 18 63 0.85 # 29791 # 30468 # -1 # ID=2_38;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 2_25 - 169 DnaJ_CXXCXGXG PF00684.14 66 2.6e-05 17.7 0.3 1 1 3.3e-07 4.8e-05 16.8 0.3 1 32 6 38 3 49 0.70 # 20564 # 21070 # -1 # ID=2_25;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_47 - 504 UvrD_C PF13361.1 351 1.3e-10 34.6 0.0 1 1 1.7e-12 2.5e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_49 - 347 AAA_13 PF13166.1 712 0.0097 7.7 36.6 1 2 0.0019 0.28 2.9 28.3 283 457 85 259 71 272 0.58 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_49 - 347 AAA_13 PF13166.1 712 0.0097 7.7 36.6 2 2 2.3e-05 0.0034 9.2 23.2 287 474 160 339 154 345 0.78 # 32321 # 33361 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_32 - 262 ArsA_ATPase PF02374.10 305 8.3e-06 18.4 0.0 1 2 3e-07 4.4e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_32 - 262 ArsA_ATPase PF02374.10 305 8.3e-06 18.4 0.0 2 2 0.029 4.2 -0.3 0.0 124 136 124 136 106 143 0.79 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_10 - 126 DYW_deaminase PF14432.1 116 0.00081 12.8 0.1 1 1 8.9e-06 0.0013 12.2 0.1 77 111 31 65 18 69 0.82 # 5823 # 6200 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 2_32 - 262 AAA_31 PF13614.1 157 1.9e-10 34.3 0.0 1 1 2.6e-12 3.8e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 25119 # 25904 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 272 Pterin_bind PF00809.17 210 4.1e-60 196.1 0.0 1 1 3.4e-62 4.9e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 26696 # 27511 # 1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 1_47 - 504 AAA_11 PF13086.1 236 4.2e-07 23.2 0.1 1 1 1.9e-08 2.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 30523 # 32034 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_17 - 731 Zn_ribbon_recom PF13408.1 58 6.8e-06 19.8 8.2 1 2 0.00033 0.047 7.5 0.7 8 40 637 668 636 680 0.71 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_17 - 731 Zn_ribbon_recom PF13408.1 58 6.8e-06 19.8 8.2 2 2 1.1e-06 0.00015 15.4 1.4 8 41 685 719 685 728 0.80 # 13681 # 15873 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/2938cdbc-1302-4f0c-9283-448517582070 # Target file: checkm_output/bins/pm1632/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1632/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/2938cdbc-1302-4f0c-9283-448517582070 checkm_output/bins/pm1632/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:48:04 2017 # [ok]