# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 2_49 - 332 ATP-synt_ab PF00006.20 215 0.0011 12.4 0.0 1 1 8.8e-06 0.0017 11.7 0.0 16 62 159 205 151 247 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 KaiC PF06745.8 227 4.7e-05 16.4 0.2 1 2 0.00069 0.068 6.1 0.0 16 56 97 136 81 144 0.81 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 KaiC PF06745.8 227 4.7e-05 16.4 0.2 2 2 0.0001 0.01 8.8 0.1 98 153 143 196 134 217 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 KaiC PF06745.8 227 0.00034 13.6 0.0 1 1 6.1e-06 0.0006 12.8 0.0 16 53 155 190 148 240 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_55 - 301 TrkA_N PF02254.13 116 6.6e-05 16.8 0.0 1 1 8e-07 0.00016 15.6 0.0 1 42 7 48 7 79 0.86 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 1 3 0.0039 0.77 2.4 0.0 187 220 94 125 59 130 0.79 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 2 3 3.3e-06 0.00066 12.5 0.0 132 231 218 308 202 332 0.82 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 3 3 0.057 11 -1.4 0.0 132 160 346 369 314 377 0.67 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_50 - 91 HTH_IclR PF09339.5 52 5.6e-06 19.8 0.0 1 1 2.1e-07 1e-05 18.9 0.0 4 43 9 47 8 49 0.92 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_51 - 72 HTH_IclR PF09339.5 52 0.00013 15.4 1.1 1 1 2.9e-06 0.00014 15.3 0.3 12 46 26 60 24 60 0.88 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 1_61 - 508 HTH_IclR PF09339.5 52 0.00066 13.1 0.0 1 1 3.3e-05 0.0016 11.9 0.0 14 40 15 41 10 42 0.88 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_23 - 98 HTH_IclR PF09339.5 52 0.0016 11.9 0.0 1 1 8.3e-05 0.0041 10.6 0.0 25 49 38 62 28 64 0.95 # 13286 # 13579 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_49 - 332 ABC_tran PF00005.22 137 3.1e-06 21.4 0.0 1 1 2.5e-08 4.9e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 7_2 - 186 HTH_22 PF13309.1 64 2.3e-05 18.0 0.0 1 1 7.5e-07 0.00015 15.4 0.0 47 64 166 183 163 183 0.94 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 2_55 - 301 NAD_binding_11 PF14833.1 122 9.3e-38 122.9 0.3 1 2 0.029 5.7 0.9 1.1 8 53 96 141 92 153 0.85 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 NAD_binding_11 PF14833.1 122 9.3e-38 122.9 0.3 2 2 4.7e-40 9.3e-38 122.9 0.3 1 121 170 289 170 290 0.98 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 3_9 - 91 HTH_35 PF13693.1 78 2.2e-16 53.3 0.3 1 1 1.5e-18 2.9e-16 53.0 0.3 6 71 19 83 15 89 0.89 # 4772 # 5044 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 2_36 - 488 DUF815 PF05673.8 250 3.1e-06 20.1 0.0 1 1 5e-08 9.8e-06 18.5 0.0 19 154 208 353 194 365 0.75 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_57 - 102 HTH_AsnC-type PF13404.1 42 2e-05 17.9 0.0 1 1 3.8e-07 3.7e-05 17.1 0.0 20 42 36 58 30 58 0.91 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_56 - 254 HTH_AsnC-type PF13404.1 42 0.00097 12.6 0.3 1 1 2.9e-05 0.0028 11.1 0.3 7 42 9 44 8 44 0.94 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_49 - 212 N6_Mtase PF02384.11 311 7.3e-07 22.3 0.0 1 1 5.9e-09 1.2e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 44472 # 45107 # 1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_61 - 508 rve_3 PF13683.1 67 1.7e-06 21.4 0.0 1 1 2.2e-08 4.3e-06 20.1 0.0 2 64 226 288 225 291 0.92 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_11 - 325 Sigma54_activat PF00158.21 168 4.9e-64 208.7 0.0 1 1 7.2e-66 7.1e-64 208.2 0.0 2 163 9 170 8 175 0.98 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 Sigma54_activat PF00158.21 168 1.7e-05 18.2 0.0 1 1 3.1e-07 3e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_56 - 254 HTH_DeoR PF08220.7 57 5.3e-20 64.6 1.0 1 1 7.1e-22 1.4e-19 63.3 1.0 1 55 6 60 6 61 0.97 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_32 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 1 2 5.1e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 2 2 0.056 2.7 1.2 0.0 176 204 481 509 472 510 0.86 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 FtsK_SpoIIIE PF01580.13 205 1.5e-06 21.7 0.1 1 1 8.9e-08 4.4e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 FtsK_SpoIIIE PF01580.13 205 1.7e-06 21.5 0.0 1 1 6.8e-08 3.3e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_39 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 9.4e-05 0.0046 10.3 0.0 34 53 4 23 1 28 0.83 # 38525 # 39142 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_61 - 508 HTH_38 PF13936.1 44 7.6e-07 22.5 0.8 1 3 1.5e-06 9.9e-05 15.8 0.1 12 42 9 41 4 43 0.85 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_38 PF13936.1 44 7.6e-07 22.5 0.8 2 3 0.07 4.6 0.8 0.0 20 31 76 87 68 87 0.91 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_38 PF13936.1 44 7.6e-07 22.5 0.8 3 3 0.033 2.1 1.9 0.0 1 10 208 217 208 230 0.93 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 3_9 - 91 HTH_38 PF13936.1 44 0.00036 13.9 0.0 1 2 0.00032 0.021 8.3 0.1 10 39 17 47 14 49 0.84 # 4772 # 5044 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 3_9 - 91 HTH_38 PF13936.1 44 0.00036 13.9 0.0 2 2 0.0094 0.61 3.6 0.0 25 35 59 69 53 72 0.92 # 4772 # 5044 # -1 # ID=3_9;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 1_51 - 394 HTH_38 PF13936.1 44 0.00076 12.9 0.0 1 1 2.2e-05 0.0014 12.0 0.0 5 33 120 149 116 157 0.83 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_57 - 102 SpoIIID PF12116.3 82 0.0018 12.1 0.3 1 1 3.4e-05 0.0067 10.3 0.3 10 38 23 52 18 83 0.81 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_55 - 301 2-Hacid_dh_C PF02826.14 178 2.1e-06 20.9 0.1 1 1 1.9e-08 3.7e-06 20.0 0.1 36 146 4 118 2 124 0.86 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 4_9 - 303 TIGR01830 TIGR01830 239 1.2e-47 156.2 0.0 1 1 7e-50 1.4e-47 155.9 0.0 1 237 60 298 60 300 0.92 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 5_7 - 565 FAD_oxidored PF12831.2 428 5.7e-06 19.4 3.6 1 1 2.9e-08 5.7e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_49 - 332 MobB PF03205.9 140 1.7e-05 18.4 1.9 1 1 4.5e-07 2.9e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 MobB PF03205.9 140 0.00031 14.3 0.0 1 1 1.2e-05 0.0008 13.0 0.0 3 32 103 132 101 139 0.94 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 5.2e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_14 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 1 2 2.9e-06 0.00057 13.1 0.1 2 38 8 44 7 64 0.81 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 2 2 3.4e-15 6.6e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_57 - 102 HTH_34 PF13601.1 80 0.00024 15.0 0.1 1 1 9.8e-06 0.00096 13.1 0.1 6 78 25 92 21 93 0.80 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_51 - 72 HTH_34 PF13601.1 80 0.00077 13.4 0.0 1 1 9.7e-06 0.00095 13.1 0.0 2 42 18 60 17 67 0.87 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 2_56 - 254 MarR PF01047.17 59 7.2e-07 22.8 0.1 1 1 3e-08 2e-06 21.4 0.1 7 47 9 49 5 52 0.95 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_24 - 101 MarR PF01047.17 59 9.9e-05 15.9 0.0 1 1 2.9e-06 0.00019 15.0 0.0 9 37 33 61 32 63 0.93 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 102 MarR PF01047.17 59 0.00052 13.6 0.0 1 1 1.2e-05 0.0008 13.0 0.0 15 44 31 60 19 60 0.79 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_55 - 301 TIGR00873 TIGR00873 467 1.2e-08 27.6 0.4 1 1 8.2e-11 1.6e-08 27.3 0.4 2 213 7 209 6 229 0.80 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_57 - 102 HTH_Tnp_4 PF13613.1 53 0.00016 15.0 0.0 1 1 1.3e-06 0.00025 14.4 0.0 18 47 32 61 31 67 0.89 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 3_16 - 347 DUF3584 PF12128.3 1201 0.032 5.3 51.1 1 2 0.0051 1 0.4 32.3 377 534 86 242 42 246 0.65 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 DUF3584 PF12128.3 1201 0.032 5.3 51.1 2 2 2e-05 0.0039 8.3 20.6 613 709 225 327 220 345 0.80 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_55 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.4e-05 18.4 0.2 1 2 2e-06 0.00039 13.7 0.1 2 39 6 43 5 50 0.92 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 UDPG_MGDP_dh_N PF03721.9 185 1.4e-05 18.4 0.2 2 2 0.0061 1.2 2.3 0.0 107 139 86 117 82 126 0.77 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 1 2 4.4e-14 8.7e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 2 2 9e-07 0.00018 15.5 0.0 93 147 320 375 309 430 0.76 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 1 2 5.4e-05 0.011 9.9 0.2 9 38 99 128 96 184 0.89 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 2 2 1.4e-05 0.0028 11.8 0.1 8 41 270 306 264 380 0.74 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_11 - 325 HTH_8 PF02954.14 42 2e-09 30.8 0.4 1 1 2e-11 4e-09 29.8 0.4 6 41 286 321 282 322 0.92 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_32 - 622 DUF853 PF05872.7 504 1.7e-06 20.5 0.0 1 1 1.4e-08 2.7e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_49 - 332 Myosin_head PF00063.16 689 0.00031 12.7 0.0 1 1 2.2e-06 0.00044 12.2 0.0 84 110 157 183 147 209 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_14 - 504 AAA_19 PF13245.1 76 3.1e-09 30.4 0.0 1 1 1.3e-10 8.2e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_19 PF13245.1 76 0.00019 15.0 0.2 1 1 9.2e-06 0.0006 13.4 0.0 10 46 101 132 95 136 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_19 PF13245.1 76 0.0013 12.4 0.1 1 1 4.2e-05 0.0027 11.3 0.1 5 48 153 191 149 224 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_52 - 262 CbiA PF01656.18 195 2.3e-30 99.3 0.0 1 1 4.5e-32 2.9e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_62 - 247 CbiA PF01656.18 195 0.00072 12.8 1.6 1 2 0.085 5.6 0.1 0.1 13 26 17 30 17 33 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 CbiA PF01656.18 195 0.00072 12.8 1.6 2 2 4.4e-05 0.0029 10.9 0.0 9 31 110 132 103 134 0.92 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_16 - 816 CbiA PF01656.18 195 0.00077 12.7 0.0 1 1 2.5e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_62 - 247 KTI12 PF08433.5 270 4.5e-05 16.6 0.2 1 1 5.4e-07 0.00011 15.4 0.0 4 94 103 188 102 210 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_5 - 372 tRNA_Me_trans PF03054.11 356 7.4e-05 15.2 0.0 1 2 1.1e-06 0.00022 13.6 0.0 2 71 52 122 51 144 0.74 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 tRNA_Me_trans PF03054.11 356 7.4e-05 15.2 0.0 2 2 0.042 8.1 -1.4 0.0 193 224 274 305 236 311 0.83 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_61 - 508 Sigma70_r4_2 PF08281.7 54 6.5e-06 19.4 0.1 1 1 3.6e-07 3.6e-05 17.1 0.0 25 48 18 41 13 42 0.92 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_51 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 1 2 0.055 5.4 0.5 0.0 22 38 115 131 103 131 0.76 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_51 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 2 2 3.5e-06 0.00035 13.9 0.0 17 48 127 158 122 161 0.91 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_1 - 366 Rep_3 PF01051.16 222 2.4e-07 24.4 0.0 1 1 3e-09 5.9e-07 23.1 0.0 43 221 138 321 112 322 0.83 # 1 # 1098 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.519 5_3 - 560 rve PF00665.21 120 3.5e-26 85.6 0.0 1 1 9.9e-28 6.5e-26 84.7 0.0 2 120 173 313 172 313 0.95 # 1695 # 3374 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_60 - 235 rve PF00665.21 120 6.4e-13 42.7 0.1 1 2 0.045 2.9 1.9 0.0 78 102 27 49 6 54 0.84 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_60 - 235 rve PF00665.21 120 6.4e-13 42.7 0.1 2 2 1.8e-13 1.2e-11 38.7 0.0 9 119 75 182 70 183 0.89 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_61 - 508 rve PF00665.21 120 1.8e-11 38.1 0.0 1 1 6.2e-13 4.1e-11 36.9 0.0 22 119 147 253 124 254 0.91 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_56 - 254 Fe_dep_repress PF01325.14 60 3.1e-06 21.0 0.2 1 1 8.2e-08 8.1e-06 19.6 0.1 13 53 10 50 8 55 0.93 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_24 - 101 Fe_dep_repress PF01325.14 60 0.00026 14.8 0.1 1 1 5.9e-06 0.00058 13.7 0.1 23 42 42 61 23 63 0.84 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_49 - 332 AAA_23 PF13476.1 202 0.00087 13.5 0.0 1 1 7.2e-06 0.0014 12.8 0.0 19 39 158 178 105 184 0.91 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_19 - 290 TIGR00573 TIGR00573 217 4.4e-16 52.5 0.0 1 1 3.6e-18 7e-16 51.9 0.0 10 180 107 275 101 288 0.76 # 17083 # 17952 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_62 - 247 AAA_24 PF13479.1 213 0.00059 13.3 0.0 1 1 4.6e-06 0.0009 12.7 0.0 5 77 102 170 98 176 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_55 - 301 Methyltransf_26 PF13659.1 117 0.0048 10.8 6.3 1 1 4.6e-05 0.0089 9.9 6.3 13 105 14 155 6 246 0.76 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_49 - 332 Zeta_toxin PF06414.7 201 3e-06 20.3 0.0 1 1 5.4e-08 5.3e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_36 - 488 Zeta_toxin PF06414.7 201 0.00033 13.6 0.0 1 1 6.3e-06 0.00062 12.7 0.0 18 52 244 277 239 314 0.90 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 3_14 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 1 2 2.8e-06 0.00018 15.0 0.0 19 80 20 81 11 109 0.77 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_30 PF13604.1 196 9.6e-08 25.7 0.1 2 2 0.00052 0.034 7.5 0.0 115 133 211 229 174 278 0.75 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_30 PF13604.1 196 0.00023 14.6 0.0 1 1 3.1e-05 0.002 11.6 0.0 18 103 100 171 82 189 0.74 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_30 PF13604.1 196 0.0003 14.3 0.1 1 2 7.1e-05 0.0046 10.4 0.1 11 51 151 190 145 197 0.80 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_30 PF13604.1 196 0.0003 14.3 0.1 2 2 0.035 2.3 1.6 0.0 121 178 204 258 191 272 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_55 - 301 F420_oxidored PF03807.12 96 4.2e-06 21.0 0.6 1 1 1.3e-07 1.3e-05 19.5 0.2 2 78 7 79 6 98 0.82 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 1 2 0.0047 0.46 4.9 1.2 2 31 100 126 99 131 0.87 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 2 2 0.015 1.5 3.3 0.1 1 34 271 300 271 323 0.87 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_60 - 235 HTH_Tnp_1 PF01527.15 76 0.00049 13.9 0.3 1 1 5.4e-06 0.0011 12.9 0.3 4 51 6 58 4 63 0.79 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_5 - 372 TIGR02432 TIGR02432 189 7.9e-05 16.2 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 119 0.85 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 TIGR02432 TIGR02432 189 7.9e-05 16.2 0.1 2 2 0.0084 1.6 2.1 0.0 140 165 235 260 207 262 0.76 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_61 - 508 GerE PF00196.14 58 0.0012 12.0 0.0 1 1 2.2e-05 0.0043 10.3 0.0 17 40 18 41 17 42 0.92 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_32 - 622 TraG-D_C PF12696.2 128 5.6e-15 49.2 0.0 1 1 1e-16 1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 TraG-D_C PF12696.2 128 1.7e-06 21.8 0.0 1 1 4e-08 3.9e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_60 - 235 DDE_3 PF13358.1 146 0.0013 12.3 0.0 1 1 2.1e-05 0.0041 10.7 0.0 32 90 82 141 59 146 0.87 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_62 - 247 Bac_DnaA PF00308.13 219 1e-11 38.7 0.0 1 1 1e-13 2.1e-11 37.7 0.0 35 139 101 202 94 206 0.88 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_52 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 262 MipZ PF09140.6 261 3.5e-10 33.2 0.0 2 2 0.00031 0.062 6.2 0.0 89 122 117 150 89 166 0.74 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_21 - 439 DivIC PF04977.10 80 0.00047 13.5 5.4 1 2 0.00039 0.077 6.4 0.9 26 55 63 92 48 100 0.74 # 22744 # 24060 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 439 DivIC PF04977.10 80 0.00047 13.5 5.4 2 2 6.6e-05 0.013 8.9 0.3 21 48 103 130 94 132 0.89 # 22744 # 24060 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.526 2_24 - 101 Sigma70_r4 PF04545.11 50 0.00025 14.2 0.0 1 1 4.4e-06 0.00043 13.5 0.0 15 42 36 63 35 67 0.88 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_56 - 254 Sigma70_r4 PF04545.11 50 0.0082 9.4 4.2 1 1 2.6e-05 0.0026 11.0 0.4 7 39 5 38 5 43 0.90 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_36 - 488 AAA PF00004.24 132 4.1e-29 95.3 0.0 1 1 2.7e-30 1.8e-28 93.3 0.0 1 131 245 371 245 372 0.97 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_62 - 247 AAA PF00004.24 132 4.1e-09 30.6 0.1 1 1 1.6e-10 1.1e-08 29.3 0.0 1 109 103 200 103 207 0.73 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 4_11 - 325 AAA PF00004.24 132 3e-05 18.1 0.0 1 1 1e-06 6.6e-05 17.0 0.0 1 125 32 167 32 171 0.73 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 Parvo_NS1 PF01057.12 272 0.0017 11.1 0.0 1 1 1.4e-05 0.0028 10.4 0.0 104 138 148 182 140 188 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_51 - 394 KorB PF08535.5 93 1.7e-31 102.2 0.2 1 1 3e-33 5.8e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_24 - 101 HTH_37 PF13744.1 80 2e-11 37.4 0.3 1 1 2.4e-13 2.3e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 102 HTH_37 PF13744.1 80 0.00066 13.4 0.0 1 1 1e-05 0.00098 12.8 0.0 20 50 22 52 13 60 0.85 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_27 - 221 LexA_DNA_bind PF01726.11 65 0.00087 12.7 0.0 1 1 8.2e-06 0.0016 11.9 0.0 39 62 124 147 118 149 0.87 # 26708 # 27370 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.481 2_56 - 254 Rrf2 PF02082.15 83 3.7e-06 20.9 0.3 1 1 9.8e-08 9.6e-06 19.6 0.2 17 60 11 54 9 70 0.84 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_50 - 91 Rrf2 PF02082.15 83 0.0011 13.0 0.4 1 1 2.2e-05 0.0022 12.0 0.4 1 52 1 49 1 74 0.86 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_50 - 91 HTH_43 PF09904.4 90 8.1e-12 38.7 0.0 1 1 4.7e-14 9.1e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_35 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 1 2 5.3e-08 1e-05 18.8 4.7 3 37 636 669 634 671 0.90 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_35 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 2 2 1.5e-12 3e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_56 - 254 HTH_27 PF13463.1 68 0.00014 16.0 0.1 1 1 3e-06 0.00029 15.0 0.1 5 49 7 50 5 70 0.88 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_50 - 91 HTH_27 PF13463.1 68 0.00098 13.3 0.0 1 1 1.3e-05 0.0012 13.0 0.0 8 44 13 48 9 76 0.78 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_37 - 93 Ribosomal_L2_C PF03947.13 130 0.00098 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 38014 # 38292 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_61 - 508 rve_2 PF13333.1 52 0.00067 13.6 0.1 1 2 7.1e-05 0.014 9.4 0.0 7 43 250 286 248 290 0.85 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 rve_2 PF13333.1 52 0.00067 13.6 0.1 2 2 0.035 6.9 0.8 0.0 6 28 377 399 376 400 0.89 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_57 - 102 P22_Cro PF14549.1 60 0.0012 12.4 0.1 1 1 1.2e-05 0.0024 11.5 0.1 12 28 36 52 29 57 0.86 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 5_11 - 145 MerR_1 PF13411.1 69 1.8e-19 63.2 0.0 1 1 3e-21 2.9e-19 62.5 0.0 2 67 9 75 8 77 0.96 # 7681 # 8115 # 1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 5_6 - 121 MerR_1 PF13411.1 69 1.1e-13 44.7 0.0 1 1 1.8e-15 1.7e-13 44.0 0.0 1 68 4 72 4 73 0.97 # 4386 # 4748 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 2_49 - 332 cobW PF02492.14 178 4.3e-06 20.1 0.0 1 1 4.1e-08 8e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_16 PF13191.1 185 1.3e-06 22.3 0.0 1 1 1e-07 3.4e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_16 PF13191.1 185 8.9e-06 19.6 0.3 1 1 3.6e-06 0.00012 16.0 0.0 10 41 86 117 75 133 0.88 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_2 - 331 AAA_16 PF13191.1 185 4e-05 17.5 0.0 1 1 1.8e-05 0.00058 13.7 0.0 8 103 45 145 43 186 0.62 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_16 - 816 AAA_16 PF13191.1 185 5.4e-05 17.1 0.2 1 1 9.5e-06 0.00031 14.6 0.2 20 63 447 490 439 659 0.64 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_39 - 206 AAA_16 PF13191.1 185 8.3e-05 16.5 0.1 1 1 3.8e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 38525 # 39142 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 4_11 - 325 AAA_16 PF13191.1 185 0.00051 13.9 0.1 1 1 4.3e-05 0.0014 12.5 0.0 18 64 21 69 10 126 0.78 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 5_2 - 331 AAA_22 PF13401.1 131 9.9e-17 55.2 0.0 1 1 5.6e-18 1.8e-16 54.3 0.0 7 126 64 190 59 194 0.94 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 1_62 - 247 AAA_22 PF13401.1 131 1.5e-07 25.5 0.3 1 1 7.4e-06 0.00024 15.1 0.3 4 113 100 192 97 204 0.68 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_22 PF13401.1 131 5.4e-07 23.7 0.0 1 1 3.7e-08 1.2e-06 22.6 0.0 3 54 157 202 153 241 0.74 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_14 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 1 2 0.00016 0.0052 10.8 0.0 8 68 23 92 17 122 0.63 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 2 2 0.03 0.97 3.4 0.0 82 124 189 225 164 229 0.77 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_32 - 622 AAA_22 PF13401.1 131 0.00025 15.1 0.0 1 1 2.5e-05 0.00082 13.4 0.0 3 68 171 231 166 287 0.83 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_36 - 488 AAA_22 PF13401.1 131 0.00094 13.2 1.1 1 1 0.0018 0.058 7.4 0.8 69 121 283 344 243 354 0.66 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_56 - 254 DUF977 PF06163.6 127 0.00035 14.2 0.3 1 1 9.8e-06 0.00096 12.8 0.3 15 57 8 50 4 65 0.87 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 5_6 - 121 DUF977 PF06163.6 127 0.00059 13.5 0.1 1 1 1.2e-05 0.0012 12.5 0.0 27 70 4 47 2 65 0.90 # 4386 # 4748 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_62 - 247 TIGR00362 TIGR00362 437 8.2e-14 45.0 0.1 1 1 5e-16 9.8e-14 44.7 0.1 138 241 101 201 13 205 0.91 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 TIGR01074 TIGR01074 668 2.4e-10 32.7 0.8 1 3 0.0039 0.76 1.4 0.0 8 33 12 38 7 57 0.74 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 TIGR01074 TIGR01074 668 2.4e-10 32.7 0.8 2 3 4.1e-07 8e-05 14.5 0.0 205 254 192 238 179 271 0.87 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 TIGR01074 TIGR01074 668 2.4e-10 32.7 0.8 3 3 7.5e-07 0.00015 13.6 0.1 534 614 396 472 347 493 0.80 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_61 - 508 NUMOD1 PF07453.8 37 0.00012 15.8 0.1 1 1 4.4e-06 0.00029 14.6 0.1 18 37 21 40 17 40 0.95 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_57 - 102 NUMOD1 PF07453.8 37 0.00046 13.9 0.0 1 1 1.4e-05 0.00094 12.9 0.0 20 35 37 52 30 54 0.91 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 7_2 - 186 NUMOD1 PF07453.8 37 0.0026 11.5 0.0 1 1 7.7e-05 0.005 10.6 0.0 20 37 165 182 164 182 0.90 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 1_50 - 91 HTH_9 PF08221.6 62 0.00054 13.7 0.0 1 1 4.4e-06 0.00087 13.0 0.0 19 51 14 46 11 47 0.90 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_49 - 332 AAA_29 PF13555.1 62 0.002 11.6 0.0 1 1 2.3e-05 0.0046 10.4 0.0 19 43 157 178 145 188 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_7 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 1 2 1.4e-06 0.00028 15.2 1.5 1 31 99 129 99 131 0.96 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 2 2 6.2e-18 1.2e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_57 - 102 HTH_1 PF00126.22 60 2.7e-24 78.6 0.7 1 1 7.5e-26 3.7e-24 78.2 0.7 4 60 24 80 21 80 0.96 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 4_18 - 292 HTH_1 PF00126.22 60 4.5e-23 74.7 2.1 1 1 1.9e-24 9.4e-23 73.7 2.1 1 60 8 67 8 67 0.97 # 14840 # 15715 # 1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 1_50 - 91 HTH_1 PF00126.22 60 7e-05 16.4 0.0 1 1 2.2e-06 0.00011 15.8 0.0 22 51 31 61 30 76 0.79 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_58 - 189 HTH_1 PF00126.22 60 0.002 11.8 1.9 1 2 0.079 3.9 1.2 0.0 22 39 66 83 65 87 0.92 # 34464 # 35030 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 2_58 - 189 HTH_1 PF00126.22 60 0.002 11.8 1.9 2 2 0.00053 0.026 8.2 0.3 9 35 155 181 149 184 0.86 # 34464 # 35030 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 4_9 - 303 adh_short_C2 PF13561.1 241 5.1e-30 98.8 0.0 1 1 3e-32 5.9e-30 98.6 0.0 5 239 66 298 63 300 0.95 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 1_62 - 247 AAA_28 PF13521.1 163 0.00028 14.7 1.2 1 2 0.089 17 -0.9 0.2 51 70 36 55 8 70 0.60 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_28 PF13521.1 163 0.00028 14.7 1.2 2 2 3.1e-06 0.0006 13.6 0.0 2 48 103 154 102 216 0.84 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_7 - 565 HI0933_like PF03486.9 409 4.3e-08 25.8 3.7 1 2 1.2e-06 0.00023 13.5 2.5 2 33 99 130 98 138 0.91 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 HI0933_like PF03486.9 409 4.3e-08 25.8 3.7 2 2 7.2e-06 0.0014 10.9 0.0 82 164 284 366 276 385 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 4_9 - 303 adh_short PF00106.20 167 3.3e-34 112.1 0.1 1 1 2.1e-36 4e-34 111.8 0.1 3 166 60 225 58 226 0.97 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 1_61 - 508 HTH_32 PF13565.1 77 7e-07 23.9 1.4 1 3 0.06 5.9 1.7 0.0 48 77 19 40 6 40 0.72 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_32 PF13565.1 77 7e-07 23.9 1.4 2 3 4e-06 0.00039 15.1 0.2 2 76 36 103 33 104 0.69 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_32 PF13565.1 77 7e-07 23.9 1.4 3 3 0.0047 0.46 5.2 0.0 33 60 439 465 404 472 0.79 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_60 - 235 HTH_32 PF13565.1 77 2.5e-06 22.1 0.2 1 1 1.1e-07 1.1e-05 20.0 0.0 26 76 5 50 2 51 0.83 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_14 - 504 TIGR00609 TIGR00609 1175 8.3e-12 37.5 1.1 1 4 0.0098 1.9 -0.2 0.0 13 27 23 37 13 47 0.82 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 TIGR00609 TIGR00609 1175 8.3e-12 37.5 1.1 2 4 1.4e-10 2.8e-08 25.8 0.0 368 454 190 270 179 282 0.80 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 TIGR00609 TIGR00609 1175 8.3e-12 37.5 1.1 3 4 0.011 2.1 -0.3 0.0 728 746 412 430 401 437 0.88 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 TIGR00609 TIGR00609 1175 8.3e-12 37.5 1.1 4 4 7.4e-05 0.015 6.8 0.1 789 818 446 475 417 502 0.70 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 4_1 - 514 A2L_zn_ribbon PF08792.5 33 0.013 8.9 4.7 1 2 0.00037 0.036 7.5 0.6 5 29 76 101 74 102 0.90 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_1 - 514 A2L_zn_ribbon PF08792.5 33 0.013 8.9 4.7 2 2 0.016 1.5 2.3 0.3 20 28 446 454 444 457 0.62 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_56 - 498 A2L_zn_ribbon PF08792.5 33 0.016 8.6 3.6 1 2 0.0081 0.79 3.2 0.5 5 29 75 100 73 101 0.85 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 1_56 - 498 A2L_zn_ribbon PF08792.5 33 0.016 8.6 3.6 2 2 0.0014 0.13 5.7 0.1 2 13 439 450 439 453 0.85 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 2_56 - 254 GntR PF00392.16 64 6.8e-07 22.6 0.5 1 1 8.1e-09 1.6e-06 21.4 0.5 26 59 21 54 9 59 0.92 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_24 - 101 HTH_3 PF01381.17 55 9e-08 25.8 0.1 1 1 1.3e-09 1.3e-07 25.3 0.1 1 44 33 76 33 84 0.86 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_61 - 508 HTH_3 PF01381.17 55 0.00021 15.0 0.4 1 1 1.2e-05 0.0011 12.7 0.1 8 32 18 42 16 52 0.86 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_9 - 303 Epimerase PF01370.16 236 2.8e-06 20.8 0.0 1 1 1.9e-08 3.7e-06 20.4 0.0 1 157 60 224 60 238 0.80 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 1_61 - 508 HTH_23 PF13384.1 50 5.1e-09 29.5 1.5 1 1 4.4e-09 1.2e-07 25.1 0.1 7 40 3 42 1 45 0.81 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 5_3 - 560 HTH_23 PF13384.1 50 7.9e-07 22.5 0.9 1 1 1.1e-07 3.1e-06 20.6 0.9 3 45 23 71 21 76 0.87 # 1695 # 3374 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_60 - 235 HTH_23 PF13384.1 50 1.2e-05 18.8 0.7 1 1 1.3e-05 0.00036 14.0 0.1 28 42 41 55 40 62 0.87 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_56 - 254 HTH_23 PF13384.1 50 4.8e-05 16.8 0.1 1 1 4.4e-06 0.00012 15.5 0.1 4 45 4 47 1 50 0.86 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_51 - 394 HTH_23 PF13384.1 50 0.00024 14.6 0.2 1 1 6.1e-05 0.0017 11.9 0.0 4 35 122 154 119 161 0.81 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_57 - 102 HTH_23 PF13384.1 50 0.00074 13.1 0.0 1 1 5.3e-05 0.0015 12.1 0.0 15 40 31 56 25 65 0.79 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 7_2 - 186 HTH_23 PF13384.1 50 0.00078 13.0 1.2 1 1 5e-05 0.0014 12.2 0.0 10 39 154 183 149 184 0.80 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 7_2 - 186 HTH_7 PF02796.10 45 8.5e-14 45.1 0.1 1 1 1.8e-15 1.8e-13 44.1 0.1 1 44 141 184 141 185 0.98 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 1_61 - 508 HTH_7 PF02796.10 45 3e-05 17.7 0.0 1 1 7.6e-07 7.5e-05 16.4 0.0 11 43 7 41 4 43 0.90 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_1 - 514 Ribosomal_S27e PF01667.12 55 0.00017 15.0 0.8 1 1 1.7e-06 0.00017 15.0 0.8 5 33 72 100 69 105 0.90 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_56 - 498 Ribosomal_S27e PF01667.12 55 0.001 12.5 1.1 1 1 2.8e-05 0.0028 11.1 1.1 5 33 71 99 68 104 0.90 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 2_24 - 101 HTH_19 PF12844.2 64 7.1e-08 26.3 0.0 1 1 1e-09 1e-07 25.8 0.0 4 52 33 81 31 86 0.95 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_61 - 508 HTH_19 PF12844.2 64 0.00089 13.2 0.0 1 1 1.9e-05 0.0018 12.2 0.0 11 44 18 51 16 89 0.84 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_9 - 303 DUF1776 PF08643.5 299 0.0002 14.4 0.0 1 1 1.5e-06 0.0003 13.8 0.0 107 195 152 234 146 239 0.84 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 4_1 - 514 zinc_ribbon_4 PF13717.1 36 0.011 9.3 4.0 1 2 0.00087 0.086 6.5 0.1 1 12 73 84 73 87 0.82 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_1 - 514 zinc_ribbon_4 PF13717.1 36 0.011 9.3 4.0 2 2 0.013 1.2 2.8 0.0 5 14 96 105 95 113 0.81 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_56 - 498 zinc_ribbon_4 PF13717.1 36 0.045 7.4 5.2 1 2 0.00098 0.097 6.3 0.1 2 14 73 85 73 87 0.84 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 1_56 - 498 zinc_ribbon_4 PF13717.1 36 0.045 7.4 5.2 2 2 0.013 1.2 2.8 0.0 5 14 95 104 94 111 0.81 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 4_11 - 325 Mg_chelatase PF01078.16 207 1.8e-08 27.6 0.0 1 2 0.00038 0.025 7.6 0.0 25 45 32 52 27 60 0.89 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 4_11 - 325 Mg_chelatase PF01078.16 207 1.8e-08 27.6 0.0 2 2 3e-07 2e-05 17.7 0.0 92 157 86 149 79 158 0.89 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_62 - 247 Mg_chelatase PF01078.16 207 0.00088 12.3 0.3 1 1 5e-05 0.0033 10.4 0.0 23 39 101 117 97 125 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 Mg_chelatase PF01078.16 207 0.0011 12.0 0.1 1 1 3.4e-05 0.0023 11.0 0.1 1 47 215 267 215 281 0.79 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 5_3 - 560 HTH_29 PF13551.1 112 6.7e-06 20.1 0.3 1 1 6.9e-08 6.7e-06 20.1 0.3 13 77 39 109 27 132 0.79 # 1695 # 3374 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_61 - 508 HTH_29 PF13551.1 112 7.2e-06 20.0 0.1 1 1 2.7e-07 2.6e-05 18.2 0.1 7 109 13 105 8 108 0.82 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 5_7 - 565 Glyco_trans_4_4 PF13579.1 160 0.00039 14.5 1.7 1 1 4.2e-06 0.00083 13.4 0.1 2 26 276 306 276 340 0.70 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 1 3 0.0081 1.6 2.3 0.1 1 41 101 135 101 162 0.81 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 2 3 0.034 6.6 0.3 0.0 134 155 218 241 202 242 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 3 3 6.6e-06 0.0013 12.4 0.1 112 155 321 366 311 367 0.85 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_61 - 508 TIGR03413 TIGR03413 248 0.0012 11.7 0.3 1 1 1.1e-05 0.0021 11.0 0.3 16 71 349 402 338 417 0.80 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 1 3 6.9e-10 6.8e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 2 3 0.076 7.4 -0.9 0.0 3 31 273 301 271 315 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 GIDA PF01134.17 392 5e-08 26.0 6.6 3 3 0.037 3.6 0.1 0.1 349 385 393 429 387 433 0.77 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_55 - 301 GIDA PF01134.17 392 0.0098 8.6 3.4 1 1 0.00014 0.014 8.1 3.4 2 72 7 78 6 90 0.89 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 3_19 - 290 DNA_pol_A_exo1 PF01612.15 176 0.00038 13.8 0.2 1 1 1.3e-05 0.0026 11.1 0.2 9 96 93 202 85 272 0.75 # 17083 # 17952 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 5_7 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 1 2 3.5e-07 6.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 2 2 0.041 8 0.5 0.2 1 25 274 298 274 303 0.81 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_60 - 235 DDE_Tnp_IS66 PF03050.9 271 4.6e-12 39.5 0.3 1 1 3e-14 5.8e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_62 - 247 Arch_ATPase PF01637.13 234 7.1e-06 19.7 0.1 1 1 4.4e-07 4.3e-05 17.1 0.1 18 94 99 167 85 198 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 Arch_ATPase PF01637.13 234 1.7e-05 18.4 0.0 1 1 3.2e-07 3.2e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 PhoH PF02562.11 205 3.5e-07 23.5 0.0 1 1 2.1e-08 1.3e-06 21.6 0.0 13 78 94 158 82 162 0.80 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 1 2 0.0039 0.26 4.3 0.0 22 45 22 45 4 61 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 PhoH PF02562.11 205 5e-06 19.7 0.2 2 2 2.2e-05 0.0015 11.7 0.0 122 168 196 240 193 255 0.83 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 PhoH PF02562.11 205 0.0006 12.9 0.0 1 1 1.7e-05 0.0011 12.1 0.0 14 45 153 184 143 210 0.79 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_11 - 325 AAA_5 PF07728.9 139 4.5e-09 30.0 0.0 1 1 7.7e-11 7.5e-09 29.3 0.0 1 123 31 150 31 169 0.81 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 1_62 - 247 AAA_5 PF07728.9 139 0.00099 12.7 1.0 1 1 1.6e-05 0.0015 12.1 0.1 1 16 102 117 102 235 0.94 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 TIGR00763 TIGR00763 795 2.5e-05 16.4 0.1 1 1 2e-06 0.00019 13.4 0.1 340 520 227 395 218 407 0.79 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_62 - 247 TIGR00763 TIGR00763 795 0.00021 13.3 0.0 1 1 3.1e-06 0.0003 12.8 0.0 356 390 103 141 97 159 0.69 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 ResIII PF04851.10 184 2.1e-06 21.5 0.0 1 1 1.1e-07 5.4e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 ResIII PF04851.10 184 1.2e-05 19.0 0.0 1 1 3.9e-07 1.9e-05 18.4 0.0 22 61 148 196 104 202 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 ResIII PF04851.10 184 0.00011 15.9 0.2 1 1 8.2e-06 0.0004 14.1 0.1 22 55 80 133 43 163 0.69 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_32 - 622 ResIII PF04851.10 184 0.00021 15.0 0.0 1 1 8.5e-06 0.00042 14.0 0.0 23 57 170 206 129 214 0.74 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_5 - 372 PAPS_reduct PF01507.14 174 6.9e-12 39.4 0.4 1 2 0.014 2.8 1.6 0.0 2 17 53 68 52 91 0.76 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 PAPS_reduct PF01507.14 174 6.9e-12 39.4 0.4 2 2 4.4e-13 8.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_32 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 1 2 1.3e-12 8.7e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 2 2 1e-09 6.8e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 TrwB_AAD_bind PF10412.4 386 4.4e-08 25.9 0.0 1 2 2.2e-05 0.0014 11.1 0.0 6 72 442 517 438 520 0.85 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 TrwB_AAD_bind PF10412.4 386 4.4e-08 25.9 0.0 2 2 8.4e-06 0.00055 12.4 0.1 232 301 643 712 613 731 0.66 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 TrwB_AAD_bind PF10412.4 386 2.7e-05 16.8 0.1 1 1 6.4e-07 4.2e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_52 - 262 TIGR01968 TIGR01968 261 1e-08 28.4 0.1 1 2 5e-07 9.9e-05 15.3 0.1 2 39 3 41 2 45 0.84 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 262 TIGR01968 TIGR01968 261 1e-08 28.4 0.1 2 2 9e-06 0.0018 11.2 0.0 105 135 120 150 111 218 0.80 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_49 - 332 AAA_18 PF13238.1 129 9.2e-06 19.9 0.0 1 1 2e-07 1.9e-05 18.8 0.0 1 29 161 194 161 213 0.77 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_18 PF13238.1 129 0.00041 14.5 1.6 1 2 0.061 5.9 1.1 0.0 99 121 43 65 20 78 0.76 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_18 PF13238.1 129 0.00041 14.5 1.6 2 2 6.5e-05 0.0064 10.7 0.6 1 21 103 123 103 207 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_2 - 331 AAA_32 PF13654.1 509 0.00019 14.0 0.0 1 2 8.6e-06 0.0017 10.9 0.0 8 81 34 112 26 124 0.86 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 5_2 - 331 AAA_32 PF13654.1 509 0.00019 14.0 0.0 2 2 0.01 2 0.8 0.0 472 504 255 287 242 290 0.90 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 2_49 - 332 GvpD PF07088.6 484 5e-06 18.9 0.0 1 1 3.9e-08 7.6e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 DUF258 PF03193.11 161 0.00022 14.3 0.0 1 1 2e-06 0.0004 13.5 0.0 29 61 151 184 129 224 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_3 - 576 zf-CHC2 PF01807.15 98 0.0012 12.3 0.0 1 1 1.2e-05 0.0024 11.3 0.0 35 94 40 101 30 105 0.75 # 590 # 2317 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 7_3 - 991 Glycos_transf_1 PF00534.15 172 0.00028 14.2 0.0 1 1 2.8e-06 0.00055 13.2 0.0 31 118 280 373 276 374 0.90 # 791 # 3763 # 1 # ID=7_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 5_2 - 331 TniB PF05621.6 302 4.2e-201 659.8 5.7 1 1 2.6e-203 5e-201 659.6 5.7 1 287 1 287 1 300 0.98 # 700 # 1692 # -1 # ID=5_2;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.650 3_19 - 290 TIGR01406 TIGR01406 231 2.1e-18 60.3 0.0 1 1 1.5e-20 3e-18 59.8 0.0 3 179 107 279 105 288 0.85 # 17083 # 17952 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_32 - 622 DUF87 PF01935.12 229 1.7e-08 28.4 0.0 1 1 6.5e-10 4.2e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_16 - 816 DUF87 PF01935.12 229 7.3e-08 26.3 0.2 1 1 2.3e-09 1.5e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_49 - 332 DUF87 PF01935.12 229 5.2e-06 20.3 0.0 1 1 1.5e-07 9.5e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 5_3 - 560 HTH_28 PF13518.1 52 1.6e-08 28.3 0.1 1 1 1.7e-09 6.7e-08 26.3 0.1 1 46 26 78 26 87 0.76 # 1695 # 3374 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_61 - 508 HTH_28 PF13518.1 52 5.5e-06 20.2 0.2 1 1 9.5e-07 3.7e-05 17.6 0.1 10 35 15 42 7 42 0.83 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_56 - 254 HTH_28 PF13518.1 52 7.8e-05 16.5 0.0 1 1 4.7e-06 0.00018 15.3 0.0 4 41 9 48 6 53 0.89 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_60 - 235 HTH_28 PF13518.1 52 0.00011 16.0 1.2 1 1 1.3e-05 0.0005 14.0 1.2 22 36 40 54 13 55 0.76 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 7_2 - 186 HTH_28 PF13518.1 52 0.00042 14.2 0.1 1 1 3.2e-05 0.0013 12.7 0.0 16 34 165 183 150 184 0.81 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 1_61 - 508 HTH_12 PF08461.5 66 0.0011 12.6 0.3 1 1 2.5e-05 0.005 10.5 0.0 14 53 77 118 67 126 0.85 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_62 - 247 DnaB_C PF03796.10 259 0.0073 9.0 2.5 1 2 0.0002 0.038 6.6 0.0 20 48 101 129 92 143 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 DnaB_C PF03796.10 259 0.0073 9.0 2.5 2 2 0.0048 0.94 2.1 0.1 111 144 142 175 138 188 0.79 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_11 - 145 MerR-DNA-bind PF09278.6 65 4.1e-21 69.1 0.6 1 1 9.7e-23 9.5e-21 67.9 0.5 1 65 51 113 51 113 0.95 # 7681 # 8115 # 1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 5_6 - 121 MerR-DNA-bind PF09278.6 65 0.0016 12.8 7.4 1 1 2.5e-05 0.0025 12.1 7.4 1 64 47 108 47 109 0.85 # 4386 # 4748 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_61 - 508 HTH_24 PF13412.1 48 3.6e-07 23.4 1.5 1 2 8e-07 2.6e-05 17.4 0.1 11 39 12 41 10 42 0.91 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_24 PF13412.1 48 3.6e-07 23.4 1.5 2 2 0.027 0.9 2.9 0.0 8 43 67 109 60 110 0.77 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_56 - 254 HTH_24 PF13412.1 48 6.9e-07 22.5 0.4 1 1 5.7e-08 1.9e-06 21.1 0.2 5 47 7 49 5 50 0.95 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_57 - 102 HTH_24 PF13412.1 48 1.7e-06 21.3 0.0 1 1 7.4e-08 2.4e-06 20.7 0.0 16 44 32 60 22 60 0.86 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_50 - 91 HTH_24 PF13412.1 48 3.5e-05 17.0 0.1 1 1 1.6e-06 5.4e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_51 - 394 HTH_24 PF13412.1 48 3.7e-05 16.9 0.3 1 2 0.00096 0.031 7.6 0.2 1 29 104 131 104 131 0.90 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_51 - 394 HTH_24 PF13412.1 48 3.7e-05 16.9 0.3 2 2 0.0014 0.046 7.0 0.0 20 41 139 160 138 161 0.90 # 45481 # 46662 # -1 # ID=1_51;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_51 - 72 HTH_24 PF13412.1 48 3.9e-05 16.9 0.0 1 1 1.8e-06 5.9e-05 16.3 0.0 4 45 17 60 15 61 0.93 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 4_11 - 325 Sigma54_activ_2 PF14532.1 138 1.2e-24 80.8 0.0 1 1 6.5e-26 4.3e-24 79.0 0.0 1 138 9 179 9 179 0.90 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 Sigma54_activ_2 PF14532.1 138 4.7e-06 20.6 0.0 1 1 1.5e-07 9.9e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 1 3 0.022 1.5 2.8 0.2 85 121 19 55 15 57 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 2 3 0.013 0.86 3.5 0.0 20 38 99 117 85 126 0.85 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 Sigma54_activ_2 PF14532.1 138 0.0022 11.9 1.9 3 3 0.014 0.93 3.4 0.0 98 132 126 160 120 164 0.89 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 1 3 0.0039 0.76 3.0 0.0 3 26 452 475 450 503 0.86 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 2 3 0.0094 1.8 1.8 0.1 75 115 596 637 580 703 0.83 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_16 - 816 Guanylate_kin PF00625.16 183 0.00029 14.2 0.1 3 3 0.001 0.2 4.9 0.0 75 131 714 770 697 777 0.87 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_57 - 102 HTH_30 PF13556.1 59 1.3e-05 18.6 0.1 1 1 2e-07 2e-05 18.0 0.1 10 44 31 65 24 75 0.88 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_61 - 508 HTH_30 PF13556.1 59 4.3e-05 17.0 0.1 1 1 1.1e-06 0.00011 15.7 0.1 12 48 19 55 17 62 0.91 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 3_19 - 290 TIGR01298 TIGR01298 200 3.5e-07 23.7 1.1 1 1 5.8e-08 1.1e-05 18.8 1.1 1 196 97 276 97 280 0.83 # 17083 # 17952 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 1_61 - 508 HTH_10 PF04967.7 53 0.00029 14.3 0.9 1 1 5e-06 0.00049 13.6 0.0 22 48 18 44 14 49 0.86 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 7_2 - 186 HTH_10 PF04967.7 53 0.0003 14.2 0.1 1 1 2.2e-05 0.0022 11.5 0.0 29 45 167 183 156 184 0.92 # 231 # 788 # 1 # ID=7_2;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.611 5_7 - 565 TIGR01292 TIGR01292 300 3.2e-19 62.3 2.9 1 2 3.8e-05 0.0075 8.6 1.1 3 39 100 136 98 142 0.89 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 TIGR01292 TIGR01292 300 3.2e-19 62.3 2.9 2 2 1.1e-18 2.1e-16 53.1 0.0 142 296 270 428 213 430 0.81 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_49 - 332 MMR_HSR1 PF01926.18 116 0.00085 13.2 0.0 1 1 7.1e-06 0.0014 12.5 0.0 2 41 161 205 160 310 0.84 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 DEAD PF00270.24 169 5.8e-06 19.7 0.0 1 1 1.1e-07 1.1e-05 18.8 0.0 13 70 157 211 144 242 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 DEAD PF00270.24 169 4.5e-05 16.8 0.0 1 1 8.7e-07 8.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_55 - 301 NAD_binding_2 PF03446.10 163 8.6e-41 133.3 3.7 1 1 6.4e-43 1.3e-40 132.8 3.7 2 162 5 166 4 167 0.96 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_24 - 101 HTH_31 PF13560.1 64 1.8e-07 25.1 0.0 1 1 2.7e-09 2.7e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_58 - 189 HTH_31 PF13560.1 64 0.043 7.9 8.6 1 2 0.033 3.2 1.9 1.4 8 30 121 148 112 151 0.71 # 34464 # 35030 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 2_58 - 189 HTH_31 PF13560.1 64 0.043 7.9 8.6 2 2 5.3e-05 0.0052 10.9 0.4 3 32 146 177 144 185 0.84 # 34464 # 35030 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 2_49 - 332 DUF2075 PF09848.4 352 0.00018 14.4 0.0 1 1 1.3e-06 0.00025 13.9 0.0 1 32 158 187 158 216 0.76 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 3_14 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.0 0.0 1 1 3.5e-12 6.8e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_61 - 508 HTH_36 PF13730.1 55 0.00014 15.9 0.2 1 2 2e-05 0.004 11.2 0.0 12 48 8 42 5 42 0.85 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_36 PF13730.1 55 0.00014 15.9 0.2 2 2 0.013 2.5 2.2 0.0 25 51 74 109 59 110 0.73 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 2_35 - 311 TIGR01973 TIGR01973 606 3e-05 16.5 0.8 1 1 2.2e-07 4.3e-05 16.0 0.8 384 504 62 181 59 212 0.85 # 18351 # 19283 # 1 # ID=2_35;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.508 2_49 - 332 T2SE PF00437.15 272 6.2e-52 170.0 0.1 1 1 7.4e-54 7.2e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00057 12.6 0.0 116 162 163 206 124 227 0.78 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 5_3 - 560 HTH_Tnp_Mu_2 PF09039.6 108 2e-05 18.2 0.0 1 1 2.8e-07 5.5e-05 16.8 0.0 37 101 100 163 83 166 0.91 # 1695 # 3374 # -1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_49 - 332 NACHT PF05729.7 166 0.00017 15.1 0.0 1 1 3.8e-06 0.00038 14.0 0.0 1 27 159 185 159 188 0.90 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 NACHT PF05729.7 166 0.0014 12.1 1.5 1 1 9.4e-05 0.0092 9.5 0.4 3 24 103 124 101 205 0.90 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 UPF0079 PF02367.12 123 1.2e-05 18.8 0.0 1 1 1.2e-07 2.4e-05 17.8 0.0 9 45 152 188 145 193 0.85 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 AAA_17 PF13207.1 121 4.5e-05 18.1 0.3 1 1 2e-06 0.00013 16.7 0.1 2 49 103 154 102 223 0.67 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_17 PF13207.1 121 0.00025 15.8 0.0 1 1 1.9e-05 0.0012 13.5 0.0 2 63 245 299 245 388 0.63 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_49 - 332 AAA_17 PF13207.1 121 0.00079 14.1 0.1 1 1 2.8e-05 0.0019 12.9 0.1 2 40 161 195 160 229 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_7 PF12775.2 272 0.00019 14.4 0.0 1 1 2.3e-06 0.00046 13.2 0.0 25 64 150 189 139 209 0.86 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_1 - 514 DZR PF12773.2 50 0.012 9.4 4.8 1 2 0.0017 0.33 4.8 3.4 1 20 77 101 64 109 0.61 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_1 - 514 DZR PF12773.2 50 0.012 9.4 4.8 2 2 0.0053 1 3.1 0.0 13 23 448 458 441 487 0.75 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 2_49 - 332 TIGR03346 TIGR03346 853 0.00029 12.8 0.0 1 1 4e-06 0.00039 12.3 0.0 598 641 161 204 149 238 0.89 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 TIGR03346 TIGR03346 853 0.001 11.0 0.0 1 1 1.4e-05 0.0014 10.5 0.0 194 220 100 126 86 169 0.88 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 1 3 4.3e-08 8.4e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 2 3 0.034 6.7 -0.8 0.1 143 204 311 369 297 388 0.72 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 FAD_binding_2 PF00890.19 417 8.4e-06 18.6 4.7 3 3 0.074 15 -1.9 0.0 376 402 388 408 377 424 0.82 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_62 - 247 AAA_25 PF13481.1 194 6.3e-06 19.5 0.0 1 2 3.2e-06 0.00012 15.3 0.0 24 58 90 125 76 135 0.82 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_25 PF13481.1 194 6.3e-06 19.5 0.0 2 2 0.052 2.1 1.6 0.0 131 151 150 170 122 173 0.78 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 1 3 0.061 2.4 1.3 1.4 36 55 245 264 224 275 0.81 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 2 3 0.00018 0.0069 9.6 0.0 127 176 287 336 270 348 0.69 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_36 - 488 AAA_25 PF13481.1 194 0.00012 15.3 3.6 3 3 0.021 0.82 2.9 0.0 69 172 337 440 325 448 0.66 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 1_16 - 816 AAA_25 PF13481.1 194 0.00067 12.9 0.0 1 1 4.2e-05 0.0017 11.6 0.0 36 86 454 494 447 532 0.82 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_52 - 262 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 3e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_32 - 622 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 6.1e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 1 3 1.4e-05 0.0028 11.0 0.0 2 49 23 73 22 87 0.67 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 2 3 1.8e-05 0.0036 10.7 0.0 56 105 188 234 146 256 0.78 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 Pox_A32 PF04665.7 241 0.0002 14.6 0.0 1 1 1.7e-06 0.00033 13.8 0.0 12 46 157 191 150 210 0.85 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_62 - 247 RuvB_N PF05496.7 234 4.3e-06 19.7 0.2 1 1 5.2e-08 1e-05 18.5 0.1 51 114 101 174 95 223 0.75 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_14 PF13173.1 128 1.2e-05 19.1 0.1 1 1 4.7e-07 3.1e-05 17.8 0.0 2 96 100 200 99 210 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_14 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 1 2 7.6e-05 0.005 10.6 0.1 11 46 28 62 18 156 0.76 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_14 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 2 2 0.0034 0.22 5.3 0.0 51 99 176 227 127 241 0.73 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_49 - 332 AAA_14 PF13173.1 128 0.00054 13.7 0.1 1 2 0.0067 0.43 4.3 0.0 64 96 135 165 98 166 0.69 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 AAA_14 PF13173.1 128 0.00054 13.7 0.1 2 2 9.5e-05 0.0062 10.3 0.0 2 35 158 191 157 213 0.80 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_50 - 91 Mga PF05043.8 87 0.0005 14.2 0.1 1 1 3.1e-06 0.00062 13.9 0.1 17 55 9 47 2 62 0.89 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 9_1 - 335 Transposase_20 PF02371.11 87 2.2e-24 79.3 0.2 1 1 2.3e-26 4.6e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 279 # 1283 # -1 # ID=9_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.480 5_11 - 145 MerR PF00376.18 38 1.6e-13 43.9 0.2 1 1 4.5e-15 2.9e-13 43.1 0.2 1 38 9 46 9 46 0.99 # 7681 # 8115 # 1 # ID=5_11;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 5_6 - 121 MerR PF00376.18 38 2.4e-06 20.9 0.0 1 1 5.9e-08 3.9e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 4386 # 4748 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 2_56 - 254 MerR PF00376.18 38 0.0016 11.9 0.3 1 1 0.00019 0.012 9.1 0.1 1 18 21 38 21 53 0.80 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_62 - 247 AAA_33 PF13671.1 143 0.00016 15.4 0.1 1 1 1e-05 0.00065 13.4 0.0 2 19 103 120 103 200 0.77 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_36 - 488 AAA_33 PF13671.1 143 0.00054 13.7 0.0 1 1 2.4e-05 0.0016 12.2 0.0 2 33 245 297 245 399 0.73 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 2_49 - 332 AAA_33 PF13671.1 143 0.00072 13.3 0.0 1 1 1.8e-05 0.0012 12.6 0.0 2 26 161 188 160 256 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_32 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00036 13.2 0.0 12 68 158 209 153 214 0.88 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_56 - 254 PaaX PF07848.7 70 5.8e-06 20.1 0.2 1 1 1.1e-07 1.1e-05 19.3 0.2 15 68 14 64 10 66 0.85 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_23 - 98 PaaX PF07848.7 70 0.0002 15.2 0.0 1 1 2.8e-06 0.00028 14.8 0.0 19 70 28 79 10 79 0.88 # 13286 # 13579 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_32 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 1 2 5.2e-07 0.0001 14.8 0.0 37 115 168 249 125 365 0.73 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_32 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 2 2 0.097 19 -2.6 0.0 328 389 494 555 474 572 0.74 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_49 - 332 RNA_helicase PF00910.17 107 3.9e-05 17.7 0.1 1 2 3.5e-06 0.00068 13.7 0.0 1 25 161 185 161 242 0.75 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_49 - 332 RNA_helicase PF00910.17 107 3.9e-05 17.7 0.1 2 2 0.027 5.3 1.2 0.1 69 100 290 322 281 328 0.78 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_36 - 488 AAA_2 PF07724.9 171 6.9e-06 19.9 0.0 1 1 5.8e-07 3.8e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 19357 # 20820 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.511 4_11 - 325 AAA_2 PF07724.9 171 1e-05 19.4 0.0 1 1 3.7e-07 2.4e-05 18.1 0.0 6 131 32 152 30 181 0.85 # 9549 # 10523 # -1 # ID=4_11;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.534 2_49 - 332 AAA_2 PF07724.9 171 1.1e-05 19.2 0.0 1 1 3.1e-07 2e-05 18.4 0.0 3 54 158 204 156 216 0.89 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_9 - 303 Eno-Rase_NADH_b PF12242.3 78 1.1e-05 19.0 0.1 1 1 1.1e-07 2.2e-05 18.1 0.1 33 66 52 83 45 93 0.80 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 1_62 - 247 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 1 2 0.0004 0.079 6.5 0.0 2 30 103 131 102 133 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 NTPase_1 PF03266.10 168 0.0002 15.0 0.1 2 2 0.00053 0.1 6.1 0.0 89 112 156 178 139 205 0.70 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 5_7 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 1 2 0.001 0.1 6.0 0.8 15 50 92 127 89 130 0.90 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 2 2 4.2e-05 0.0041 10.5 0.1 16 58 265 307 257 339 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_55 - 301 AlaDh_PNT_C PF01262.16 168 0.00026 14.5 1.6 1 2 8.4e-06 0.00082 12.8 0.1 21 66 5 50 2 62 0.90 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 2_55 - 301 AlaDh_PNT_C PF01262.16 168 0.00026 14.5 1.6 2 2 0.056 5.5 0.4 0.2 13 42 84 113 72 117 0.84 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 1_41 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 1 2 2.1e-11 4e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 39854 # 41281 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_41 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 2 2 0.0031 0.6 2.9 0.0 290 330 407 448 341 452 0.73 # 39854 # 41281 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_55 - 301 3HCDH_N PF02737.13 180 4.9e-07 23.4 0.7 1 1 2.1e-08 2.1e-06 21.3 0.7 1 40 6 45 6 116 0.91 # 31441 # 32343 # -1 # ID=2_55;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.643 5_7 - 565 3HCDH_N PF02737.13 180 0.0062 10.0 6.4 1 2 0.0095 0.93 2.9 2.4 1 30 99 128 99 134 0.93 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 3HCDH_N PF02737.13 180 0.0062 10.0 6.4 2 2 0.00018 0.018 8.6 0.1 2 39 272 309 271 348 0.73 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_5 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 1 2 5.2e-05 0.01 9.2 0.0 1 59 52 110 52 129 0.78 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 2 2 0.005 0.99 2.7 0.0 134 161 232 260 207 262 0.72 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_56 - 498 zinc_ribbon_5 PF13719.1 37 0.0042 10.6 2.7 1 2 0.00063 0.061 6.8 0.0 2 14 73 85 72 87 0.83 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 1_56 - 498 zinc_ribbon_5 PF13719.1 37 0.0042 10.6 2.7 2 2 0.0097 0.95 3.0 0.0 5 14 95 104 94 113 0.81 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 4_1 - 514 zinc_ribbon_5 PF13719.1 37 0.0087 9.6 3.9 1 2 0.0008 0.078 6.5 0.1 1 12 73 84 73 87 0.82 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_1 - 514 zinc_ribbon_5 PF13719.1 37 0.0087 9.6 3.9 2 2 0.01 1 3.0 0.0 5 14 96 105 95 113 0.81 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 2_5 - 372 TIGR00420 TIGR00420 351 0.002 10.5 0.0 1 2 0.00011 0.021 7.2 0.0 2 64 52 110 51 128 0.77 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_5 - 372 TIGR00420 TIGR00420 351 0.002 10.5 0.0 2 2 0.0073 1.4 1.1 0.0 192 223 274 305 245 313 0.89 # 2587 # 3702 # -1 # ID=2_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_7 - 565 Glyco_transf_4 PF13439.1 177 1.2e-05 19.0 0.1 1 1 1.3e-07 2.6e-05 17.8 0.1 13 40 276 303 272 356 0.82 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_60 - 235 DDE_Tnp_IS240 PF13610.1 140 1.5e-52 171.2 0.0 1 1 1.1e-54 2.1e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 53754 # 54458 # 1 # ID=1_60;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_26 - 183 HTH_26 PF13443.1 63 0.00018 15.6 0.1 1 2 0.0022 0.44 4.7 0.0 9 48 53 91 45 92 0.86 # 14426 # 14974 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_26 - 183 HTH_26 PF13443.1 63 0.00018 15.6 0.1 2 2 0.00018 0.035 8.2 0.0 39 56 163 180 155 182 0.92 # 14426 # 14974 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 2_58 - 189 HTH_17 PF12728.2 51 0.00065 13.8 0.1 1 1 8.4e-06 0.0016 12.5 0.1 2 22 160 180 159 182 0.90 # 34464 # 35030 # 1 # ID=2_58;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.674 4_1 - 514 Zn-ribbon_8 PF09723.5 42 0.00054 13.8 7.4 1 2 0.00069 0.045 7.6 5.0 7 35 76 102 75 106 0.81 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 4_1 - 514 Zn-ribbon_8 PF09723.5 42 0.00054 13.8 7.4 2 2 0.0024 0.15 5.9 0.0 8 24 450 466 437 470 0.75 # 508 # 2049 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.554 1_35 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 1 2 0.014 0.91 3.5 0.1 23 40 631 647 624 648 0.85 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_35 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 2 2 0.0018 0.12 6.3 3.4 20 38 676 693 657 696 0.81 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_56 - 498 Zn-ribbon_8 PF09723.5 42 0.074 7.0 9.5 1 2 0.0015 0.1 6.5 5.2 7 35 75 101 75 105 0.89 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 1_56 - 498 Zn-ribbon_8 PF09723.5 42 0.074 7.0 9.5 2 2 0.049 3.2 1.7 0.1 25 37 439 450 430 459 0.71 # 49623 # 51116 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.607 1_3 - 576 Prim_Zn_Ribbon PF08273.7 40 6.6e-14 45.6 4.2 1 1 5.8e-16 1.1e-13 44.9 4.2 1 40 36 74 36 74 0.95 # 590 # 2317 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_56 - 254 HTH_11 PF08279.7 55 1.9e-12 40.6 0.3 1 1 5e-14 3.3e-12 39.8 0.3 1 53 6 55 6 57 0.89 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_61 - 508 HTH_11 PF08279.7 55 4e-06 20.3 3.7 1 2 4.4e-06 0.00029 14.4 0.1 9 37 13 41 3 47 0.83 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_11 PF08279.7 55 4e-06 20.3 3.7 2 2 0.0028 0.19 5.4 0.1 26 42 94 110 66 113 0.82 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_50 - 91 HTH_11 PF08279.7 55 0.00069 13.1 0.0 1 1 1.4e-05 0.00093 12.7 0.0 1 46 9 54 9 70 0.77 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 4_5 - 131 BOF PF04076.8 103 1.2e-33 109.0 0.0 1 1 7.4e-36 1.4e-33 108.7 0.0 4 103 30 130 26 130 0.97 # 5631 # 6023 # -1 # ID=4_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.466 2_56 - 254 MarR_2 PF12802.2 62 3e-07 23.9 2.4 1 1 1.8e-08 6.9e-07 22.8 0.7 8 54 8 52 5 65 0.92 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_24 - 101 MarR_2 PF12802.2 62 1.4e-05 18.6 0.0 1 1 7.2e-07 2.8e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_51 - 72 MarR_2 PF12802.2 62 1.6e-05 18.4 0.1 1 1 6.6e-07 2.6e-05 17.7 0.1 12 49 23 60 4 60 0.84 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 1_61 - 508 MarR_2 PF12802.2 62 4.5e-05 17.0 0.2 1 2 0.0024 0.094 6.3 0.0 18 40 16 38 12 42 0.80 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 MarR_2 PF12802.2 62 4.5e-05 17.0 0.2 2 2 0.00093 0.036 7.7 0.0 5 31 439 463 434 469 0.91 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_57 - 102 MarR_2 PF12802.2 62 0.00015 15.2 0.1 1 1 5.4e-06 0.00021 14.8 0.1 22 47 34 59 22 80 0.86 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_51 - 72 HTH_5 PF01022.15 47 6.4e-10 32.5 0.2 1 1 1.3e-11 6.4e-10 32.5 0.2 1 43 15 60 15 60 0.93 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 1_50 - 91 HTH_5 PF01022.15 47 5.4e-06 19.9 0.0 1 1 1.6e-07 7.9e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_56 - 254 HTH_5 PF01022.15 47 4e-05 17.1 0.4 1 1 3.7e-06 0.00018 15.0 0.2 7 45 10 49 8 51 0.90 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_24 - 101 HTH_5 PF01022.15 47 0.00086 12.9 0.0 1 1 3.9e-05 0.0019 11.7 0.0 15 34 41 60 33 60 0.84 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_56 - 254 TrmB PF01978.14 68 4.5e-05 17.0 0.2 1 1 1.4e-06 9.2e-05 16.0 0.2 15 54 11 51 10 62 0.90 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 2_51 - 72 TrmB PF01978.14 68 0.0002 14.9 0.0 1 1 4.2e-06 0.00028 14.5 0.0 12 50 20 60 17 61 0.92 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 1_50 - 91 TrmB PF01978.14 68 0.0018 11.9 0.0 1 1 4.2e-05 0.0027 11.3 0.0 19 48 19 48 11 52 0.85 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 5_7 - 565 Pyr_redox_2 PF07992.9 201 1.6e-43 142.8 0.0 1 1 3.2e-45 6.4e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_55 - 101 TIGR01455 TIGR01455 442 4.8e-33 108.0 0.5 1 1 2.9e-35 5.8e-33 107.7 0.5 1 77 6 81 6 83 0.96 # 49145 # 49447 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.581 5_7 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 1 2 0.00039 0.077 6.4 0.4 28 51 105 128 99 156 0.83 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 2 2 0.0014 0.27 4.7 0.1 32 53 281 302 276 336 0.77 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_24 - 101 HTH_Crp_2 PF13545.1 76 2.5e-05 17.9 0.0 1 1 2.1e-07 4.1e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 13606 # 13908 # -1 # ID=2_24;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_50 - 91 HTH_Mga PF08280.6 59 1.7e-06 21.6 0.0 1 1 3.1e-08 2e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 45160 # 45432 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_56 - 254 HTH_Mga PF08280.6 59 0.00027 14.6 0.0 1 1 9.4e-06 0.00061 13.4 0.0 4 44 4 44 3 50 0.94 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_61 - 508 HTH_Mga PF08280.6 59 0.0021 11.7 0.0 1 2 0.0056 0.37 4.5 0.0 20 42 20 42 12 43 0.87 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_Mga PF08280.6 59 0.0021 11.7 0.0 2 2 0.01 0.67 3.7 0.0 28 46 92 110 84 113 0.86 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 1 3 1.4e-08 2.7e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 2 3 0.032 6.2 -0.6 0.1 3 31 273 301 271 307 0.75 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_7 - 565 DAO PF01266.19 358 8.3e-09 28.6 11.7 3 3 9.4e-07 0.00018 14.3 0.5 152 208 314 372 307 433 0.74 # 4766 # 6460 # -1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 1 5 0.019 3.7 1.5 8.8 39 98 89 152 77 158 0.72 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 2 5 0.00084 0.16 5.9 3.1 50 100 146 196 143 199 0.89 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 3 5 2.6e-06 0.00051 13.9 12.2 19 100 216 294 201 297 0.85 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 4 5 0.00031 0.06 7.3 2.1 62 105 284 327 282 330 0.90 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 5 5 0.0059 1.1 3.1 1.6 82 105 304 327 296 345 0.51 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_19 - 290 RNase_T PF00929.19 164 7.7e-23 75.4 0.0 1 1 5.8e-25 1.1e-22 74.9 0.0 1 163 107 264 107 265 0.94 # 17083 # 17952 # -1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.539 2_56 - 254 DUF1670 PF07900.6 220 0.00021 14.4 0.1 1 1 1.5e-06 0.0003 13.9 0.1 101 203 15 117 7 124 0.79 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_16 - 816 AAA_10 PF12846.2 304 5.5e-59 193.9 0.2 1 1 1.9e-60 9.3e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 12786 # 15233 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_32 - 622 AAA_10 PF12846.2 304 2.1e-18 60.6 0.2 1 1 1.1e-19 5.6e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 29394 # 31259 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_62 - 247 AAA_10 PF12846.2 304 0.00023 14.5 0.0 1 1 6.9e-06 0.00034 13.9 0.0 2 33 101 132 100 195 0.92 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 AAA_10 PF12846.2 304 0.00052 13.3 0.0 1 1 1.6e-05 0.0008 12.7 0.0 3 29 160 185 158 233 0.81 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_51 - 72 HTH_20 PF12840.2 61 4.9e-15 49.0 0.5 1 1 1.6e-16 6.1e-15 48.7 0.5 3 52 9 60 5 60 0.94 # 29572 # 29787 # 1 # ID=2_51;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.565 2_56 - 254 HTH_20 PF12840.2 61 1.1e-06 22.2 1.5 1 1 6.8e-08 2.7e-06 21.0 0.1 14 57 9 52 7 55 0.93 # 32605 # 33366 # 1 # ID=2_56;partial=00;start_type=GTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_57 - 102 HTH_20 PF12840.2 61 2.5e-06 21.1 0.1 1 1 1.2e-07 4.6e-06 20.3 0.1 16 59 25 69 21 71 0.87 # 51228 # 51533 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_61 - 508 HTH_20 PF12840.2 61 1.6e-05 18.5 0.2 1 2 0.00047 0.019 8.7 0.0 21 46 16 41 10 42 0.92 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 1_61 - 508 HTH_20 PF12840.2 61 1.6e-05 18.5 0.2 2 2 0.011 0.44 4.3 0.1 10 34 439 463 435 472 0.86 # 54603 # 56126 # 1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.581 4_18 - 292 HTH_20 PF12840.2 61 0.00034 14.3 0.4 1 2 0.0009 0.035 7.8 0.1 20 57 16 54 4 58 0.79 # 14840 # 15715 # 1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 4_18 - 292 HTH_20 PF12840.2 61 0.00034 14.3 0.4 2 2 0.012 0.46 4.2 0.0 20 43 163 190 157 194 0.81 # 14840 # 15715 # 1 # ID=4_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 1_44 - 169 DnaJ_CXXCXGXG PF00684.14 66 3.5e-05 17.7 0.3 1 1 3.3e-07 6.5e-05 16.8 0.3 1 32 6 38 3 49 0.70 # 42111 # 42617 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 3_14 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.4e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 4_12 - 223 AAA_13 PF13166.1 712 0.0052 9.1 20.8 1 2 1.7e-06 0.00017 14.0 12.3 333 457 6 132 3 140 0.91 # 10694 # 11362 # 1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 4_12 - 223 AAA_13 PF13166.1 712 0.0052 9.1 20.8 2 2 0.024 2.3 0.3 1.2 366 397 169 201 149 222 0.35 # 10694 # 11362 # 1 # ID=4_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 3_16 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 1 2 0.0038 0.37 2.9 28.3 283 457 85 259 71 272 0.58 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 3_16 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 2 2 4.7e-05 0.0046 9.2 23.2 287 474 160 339 154 345 0.78 # 14171 # 15211 # -1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_52 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 5.9e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_52 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_28 - 126 DYW_deaminase PF14432.1 116 0.0011 12.8 0.1 1 1 8.9e-06 0.0017 12.2 0.1 77 111 31 65 18 69 0.82 # 27370 # 27747 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_52 - 262 AAA_31 PF13614.1 157 2.6e-10 34.3 0.0 1 1 2.6e-12 5.2e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 46666 # 47451 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_54 - 272 Pterin_bind PF00809.17 210 5.5e-60 196.1 0.0 1 1 6.8e-62 6.6e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 48243 # 49058 # 1 # ID=1_54;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 10_1 - 280 Pterin_bind PF00809.17 210 5e-58 189.7 0.0 1 1 6.1e-60 6e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 25 # 864 # -1 # ID=10_1;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_62 - 247 IstB_IS21 PF01695.12 178 6.3e-66 215.0 0.0 1 1 1.1e-67 1e-65 214.3 0.0 2 177 55 230 54 231 0.99 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 IstB_IS21 PF01695.12 178 5.4e-05 16.5 0.0 1 1 8.9e-07 8.7e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 4_9 - 303 KR PF08659.5 181 1.9e-13 44.3 0.0 1 1 1.3e-15 2.6e-13 43.9 0.0 3 174 60 236 59 242 0.81 # 7817 # 8725 # 1 # ID=4_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.505 3_14 - 504 AAA_11 PF13086.1 236 5.7e-07 23.2 0.1 1 1 3.8e-08 3.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 12373 # 13884 # -1 # ID=3_14;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_62 - 247 AAA_11 PF13086.1 236 0.002 11.6 0.3 1 2 0.00032 0.032 7.6 0.0 14 41 97 124 48 148 0.83 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_62 - 247 AAA_11 PF13086.1 236 0.002 11.6 0.3 2 2 0.029 2.8 1.2 0.0 184 200 154 169 145 173 0.84 # 56113 # 56853 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_49 - 332 GTP_EFTU PF00009.22 188 0.00043 13.6 0.2 1 1 3.5e-06 0.00068 12.9 0.2 2 32 157 187 156 205 0.83 # 27316 # 28311 # 1 # ID=2_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_35 - 731 Zn_ribbon_recom PF13408.1 58 9.3e-06 19.8 8.2 1 2 0.00033 0.064 7.5 0.7 8 40 637 668 636 680 0.71 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_35 - 731 Zn_ribbon_recom PF13408.1 58 9.3e-06 19.8 8.2 2 2 1.1e-06 0.00021 15.4 1.4 8 41 685 719 685 728 0.80 # 35228 # 37420 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/c09cbbbc-e2ea-4ec9-924a-c5dc305948db # Target file: checkm_output/bins/pm1622/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1622/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/c09cbbbc-e2ea-4ec9-924a-c5dc305948db checkm_output/bins/pm1622/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:47:55 2017 # [ok]