# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 510 HTH_IclR PF09339.5 52 8.2e-06 14.8 0.1 1 2 0.075 0.6 -0.8 0.0 24 42 165 183 164 186 0.78 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 HTH_IclR PF09339.5 52 8.2e-06 14.8 0.1 2 2 1.4e-05 0.00011 11.2 0.1 25 49 228 252 228 255 0.93 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_6 - 97 Cpn10 PF00166.16 93 1.9e-35 110.1 1.8 1 1 2.7e-36 2.1e-35 110.0 1.8 1 92 3 94 3 95 0.98 # 3600 # 3890 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_8 - 510 zf-ribbon_3 PF13248.1 26 8.9e-05 11.1 2.4 1 3 0.06 0.48 -0.7 0.0 3 10 82 89 80 94 0.70 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 zf-ribbon_3 PF13248.1 26 8.9e-05 11.1 2.4 2 3 0.00035 0.0028 6.4 0.1 5 11 103 110 102 116 0.64 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 zf-ribbon_3 PF13248.1 26 8.9e-05 11.1 2.4 3 3 0.0059 0.047 2.5 0.1 19 23 461 465 457 469 0.71 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_3 - 213 TMP-TENI PF02581.12 180 6.1e-07 18.0 0.0 1 2 0.094 0.75 -1.8 0.0 99 121 9 29 4 62 0.69 # 1392 # 2030 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 1_3 - 213 TMP-TENI PF02581.12 180 6.1e-07 18.0 0.0 2 2 1.6e-07 1.3e-06 17.0 0.0 64 171 71 181 36 190 0.83 # 1392 # 2030 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 1_7 - 547 Cpn60_TCP1 PF00118.19 485 5.2e-130 423.5 10.0 1 1 7.5e-131 6e-130 423.3 10.0 1 484 23 524 23 525 0.94 # 3946 # 5586 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.659 1_1 - 271 TIGR03413 TIGR03413 248 2.5e-07 19.3 0.7 1 1 6.9e-08 5.5e-07 18.2 0.7 20 96 84 165 76 251 0.71 # 206 # 1018 # 1 # ID=1_1;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.615 1_8 - 510 DZR PF12773.2 50 0.00036 9.8 3.7 1 2 0.00065 0.0052 6.1 2.8 14 40 83 112 72 117 0.73 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 DZR PF12773.2 50 0.00036 9.8 3.7 2 2 0.017 0.13 1.5 0.0 14 22 460 468 453 488 0.76 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_3 - 213 PRAI PF00697.17 197 8.1e-46 145.3 0.0 1 1 1.1e-46 9.2e-46 145.2 0.0 1 194 5 205 5 208 0.93 # 1392 # 2030 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 1_8 - 510 Zn-ribbon_8 PF09723.5 42 0.00013 11.3 5.4 1 2 0.0011 0.0091 5.4 3.5 8 35 84 109 83 114 0.87 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 Zn-ribbon_8 PF09723.5 42 0.00013 11.3 5.4 2 2 0.0017 0.013 4.9 0.0 23 38 455 469 447 473 0.76 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 Zn_Tnp_IS1595 PF12760.2 46 0.0036 6.6 9.7 1 3 0.053 0.42 -0.1 7.8 18 44 81 107 67 109 0.73 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 Zn_Tnp_IS1595 PF12760.2 46 0.0036 6.6 9.7 2 3 0.011 0.089 2.1 0.8 20 29 102 111 92 118 0.79 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 1_8 - 510 Zn_Tnp_IS1595 PF12760.2 46 0.0036 6.6 9.7 3 3 0.0043 0.034 3.4 0.0 18 28 449 469 442 478 0.66 # 5775 # 7304 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.698 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/22d66b80-b25e-499e-a5f8-5bc8faacdbaf # Target file: checkm_output/bins/pm1602/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1602/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/22d66b80-b25e-499e-a5f8-5bc8faacdbaf checkm_output/bins/pm1602/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:47:19 2017 # [ok]