# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_86 - 91 HTH_IclR PF09339.5 52 5.4e-06 19.8 0.0 1 1 1e-07 9.8e-06 18.9 0.0 4 43 9 47 8 49 0.92 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_117 - 98 HTH_IclR PF09339.5 52 0.0016 11.9 0.0 1 1 4.1e-05 0.0039 10.6 0.0 25 49 38 62 28 64 0.95 # 92530 # 92823 # -1 # ID=1_117;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.497 1_33 - 323 ABC_tran PF00005.22 137 0.0013 12.8 0.0 1 1 1.3e-05 0.0025 11.9 0.0 11 46 61 96 55 117 0.85 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_11 - 186 HTH_22 PF13309.1 64 2.2e-05 18.0 0.0 1 1 7.5e-07 0.00014 15.4 0.0 47 64 166 183 163 183 0.94 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_28 - 91 HTH_35 PF13693.1 78 2.6e-16 53.0 0.2 1 1 1.8e-18 3.4e-16 52.7 0.2 7 71 20 83 15 89 0.89 # 25939 # 26211 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 1_105 - 488 DUF815 PF05673.8 250 2.2e-06 20.5 0.0 1 1 3.7e-08 7e-06 18.9 0.0 19 154 208 353 194 365 0.75 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_85 - 212 N6_Mtase PF02384.11 311 6.9e-07 22.3 0.0 1 1 5.9e-09 1.1e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 73702 # 74337 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 3_10 - 198 rve_3 PF13683.1 67 2.6e-20 65.6 0.0 1 1 5.8e-22 5.4e-20 64.5 0.0 1 67 116 182 116 182 0.99 # 7096 # 7689 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 3_12 - 200 rve_3 PF13683.1 67 0.00029 14.2 0.0 1 1 8e-06 0.00075 12.8 0.0 2 29 145 172 144 190 0.85 # 9065 # 9664 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.373 1_67 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 1 2 3.8e-08 2.4e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_67 - 622 FtsK_SpoIIIE PF01580.13 205 1.6e-07 24.8 0.0 2 2 0.042 2.6 1.2 0.0 176 204 481 509 472 510 0.86 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_45 - 816 FtsK_SpoIIIE PF01580.13 205 1.4e-06 21.7 0.1 1 1 6.7e-08 4.2e-06 20.1 0.1 33 84 446 495 401 698 0.67 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_75 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 7.1e-05 0.0044 10.3 0.0 34 53 4 23 1 28 0.83 # 67755 # 68372 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 3_3 - 181 Cytidylate_kin2 PF13189.1 179 0.00087 13.0 0.0 1 2 6.6e-05 0.012 9.3 0.0 1 23 2 24 2 46 0.78 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 Cytidylate_kin2 PF13189.1 179 0.00087 13.0 0.0 2 2 0.015 2.8 1.6 0.0 112 135 99 122 91 136 0.77 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_28 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 1 2 9.7e-05 0.0061 10.0 0.1 9 39 16 47 14 49 0.87 # 25939 # 26211 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 2_28 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 2 2 0.0094 0.58 3.6 0.0 25 35 59 69 53 72 0.92 # 25939 # 26211 # 1 # ID=2_28;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 1_96 - 313 HTH_38 PF13936.1 44 0.00041 13.7 0.0 1 1 1.7e-05 0.0011 12.4 0.0 5 33 133 162 130 164 0.89 # 79890 # 80828 # -1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 1_87 - 394 HTH_38 PF13936.1 44 0.00073 12.9 0.0 1 1 2.2e-05 0.0014 12.0 0.0 5 33 120 149 116 157 0.83 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_67 - 622 MobB PF03205.9 140 0.00097 12.6 0.0 1 1 1.7e-05 0.0033 10.9 0.0 4 34 176 206 175 214 0.90 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 282 FmrO PF07091.6 251 7.6e-85 277.6 0.0 1 1 4.6e-87 8.7e-85 277.4 0.0 2 251 18 277 17 277 0.98 # 382 # 1227 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.411 2_23 - 504 UvrD-helicase PF00580.16 315 1e-16 54.9 3.9 1 2 2.9e-06 0.00054 13.1 0.1 2 38 8 44 7 64 0.81 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 UvrD-helicase PF00580.16 315 1e-16 54.9 3.9 2 2 3.4e-15 6.3e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_116 - 101 MarR PF01047.17 59 9.5e-05 15.9 0.0 1 1 9.5e-07 0.00018 15.0 0.0 9 37 33 61 32 63 0.93 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_21 - 347 DUF3584 PF12128.3 1201 0.031 5.3 51.1 1 2 0.0051 0.95 0.4 32.3 377 534 86 242 42 246 0.65 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 DUF3584 PF12128.3 1201 0.031 5.3 51.1 2 2 2e-05 0.0037 8.3 20.6 613 709 225 327 220 345 0.80 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_7 - 97 Cpn10 PF00166.16 93 4.5e-34 110.1 1.8 1 1 2.7e-36 5e-34 110.0 1.8 1 92 3 94 3 95 0.98 # 3766 # 4056 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_67 - 622 DUF853 PF05872.7 504 1.6e-06 20.5 0.0 1 1 1.4e-08 2.5e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_23 - 504 AAA_19 PF13245.1 76 2.9e-09 30.4 0.0 1 1 1.3e-10 7.8e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 323 AAA_19 PF13245.1 76 0.00029 14.4 0.1 1 1 1.1e-05 0.00065 13.3 0.1 10 35 61 86 51 112 0.76 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 3_3 - 181 AAA_19 PF13245.1 76 0.00044 13.8 0.0 1 1 2.5e-05 0.0015 12.1 0.0 15 33 5 22 2 38 0.84 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_88 - 262 CbiA PF01656.18 195 2.1e-30 99.3 0.0 1 1 2.9e-32 2.7e-30 99.0 0.0 1 170 5 205 5 229 0.77 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_45 - 816 CbiA PF01656.18 195 0.00074 12.7 0.0 1 1 1.7e-05 0.0016 11.7 0.0 3 49 455 517 454 593 0.60 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_135 - 372 tRNA_Me_trans PF03054.11 356 9.9e-05 14.8 0.0 1 2 1.6e-06 0.00031 13.1 0.0 2 67 52 118 51 142 0.74 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 tRNA_Me_trans PF03054.11 356 9.9e-05 14.8 0.0 2 2 0.042 7.8 -1.4 0.0 193 224 274 305 236 311 0.83 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_87 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 1 2 0.055 5.1 0.5 0.0 22 38 115 131 103 131 0.76 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_87 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 2 2 3.5e-06 0.00033 13.9 0.0 17 48 127 158 122 161 0.91 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_129 - 285 Sigma70_r4_2 PF08281.7 54 0.0017 11.7 0.3 1 1 0.0001 0.0094 9.3 0.1 30 52 187 209 186 210 0.90 # 98738 # 99592 # -1 # ID=1_129;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.515 1_137 - 361 Rep_3 PF01051.16 222 2.2e-07 24.4 0.0 1 1 2.9e-09 5.4e-07 23.2 0.0 43 221 133 316 107 317 0.83 # 105001 # 106083 # -1 # ID=1_137;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.516 3_10 - 198 rve PF00665.21 120 2e-26 86.3 0.0 1 1 3.8e-28 3.6e-26 85.5 0.0 4 118 33 143 30 145 0.95 # 7096 # 7689 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 3_12 - 200 rve PF00665.21 120 3.2e-20 66.2 0.0 1 1 4.8e-22 4.5e-20 65.8 0.0 4 119 64 172 61 173 0.92 # 9065 # 9664 # 1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.373 1_116 - 101 Fe_dep_repress PF01325.14 60 0.00025 14.8 0.1 1 1 3e-06 0.00055 13.7 0.1 23 42 42 61 23 63 0.84 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_18 - 290 TIGR00573 TIGR00573 217 3.5e-16 52.8 0.0 1 1 3e-18 5.7e-16 52.1 0.0 10 181 107 276 101 288 0.76 # 13070 # 13939 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 3_3 - 181 AAA_24 PF13479.1 213 0.00013 15.3 0.0 1 1 1.4e-06 0.00026 14.4 0.0 6 33 3 34 1 73 0.90 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_91 - 415 Methyltransf_26 PF13659.1 117 0.00011 16.1 0.0 1 2 5.9e-06 0.0011 12.8 0.0 68 116 126 180 46 181 0.82 # 77611 # 78855 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_91 - 415 Methyltransf_26 PF13659.1 117 0.00011 16.1 0.0 2 2 0.038 7.1 0.5 0.0 1 31 352 381 352 397 0.71 # 77611 # 78855 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 181 Zeta_toxin PF06414.7 201 8.4e-05 15.5 0.0 1 2 9.4e-06 0.00087 12.2 0.0 19 53 3 35 1 120 0.83 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 Zeta_toxin PF06414.7 201 8.4e-05 15.5 0.0 2 2 0.048 4.5 0.1 0.0 45 74 106 133 95 150 0.73 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_105 - 488 Zeta_toxin PF06414.7 201 0.00032 13.6 0.0 1 1 6.3e-06 0.00059 12.7 0.0 18 52 244 277 239 316 0.90 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_23 - 504 AAA_30 PF13604.1 196 9.1e-08 25.7 0.1 1 2 9.2e-07 0.00017 15.0 0.0 19 80 20 81 11 109 0.77 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 AAA_30 PF13604.1 196 9.1e-08 25.7 0.1 2 2 0.00017 0.033 7.5 0.0 115 133 211 229 174 278 0.75 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_135 - 372 TIGR02432 TIGR02432 189 7.8e-05 16.1 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 118 0.85 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 TIGR02432 TIGR02432 189 7.8e-05 16.1 0.1 2 2 0.0084 1.6 2.1 0.0 140 165 235 260 207 262 0.76 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 2_4 - 213 TMP-TENI PF02581.12 180 1.4e-05 18.0 0.0 1 2 0.094 17 -1.8 0.0 99 121 9 29 4 62 0.69 # 1558 # 2196 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 2_4 - 213 TMP-TENI PF02581.12 180 1.4e-05 18.0 0.0 2 2 1.6e-07 3e-05 17.0 0.0 64 171 71 181 36 190 0.83 # 1558 # 2196 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 1_67 - 622 TraG-D_C PF12696.2 128 5.3e-15 49.2 0.0 1 1 1e-16 9.6e-15 48.4 0.0 1 124 471 595 471 599 0.83 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_45 - 816 TraG-D_C PF12696.2 128 1.7e-06 21.8 0.0 1 1 4e-08 3.7e-06 20.6 0.0 17 75 674 728 656 734 0.84 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 3_3 - 181 TIGR03263 TIGR03263 180 0.0014 11.8 0.0 1 1 1.6e-05 0.003 10.7 0.0 3 26 2 25 1 31 0.81 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_88 - 262 MipZ PF09140.6 261 3.4e-10 33.2 0.0 1 2 6.6e-10 1.2e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_88 - 262 MipZ PF09140.6 261 3.4e-10 33.2 0.0 2 2 0.00031 0.059 6.2 0.0 89 122 117 150 89 166 0.74 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_53 - 421 DDE_Tnp_1 PF01609.16 213 1.5e-34 113.2 0.2 1 1 3.4e-36 3.2e-34 112.1 0.0 6 213 128 362 123 362 0.96 # 49456 # 50718 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 3_7 - 325 DDE_Tnp_1 PF01609.16 213 3.4e-16 53.2 0.2 1 1 6.2e-18 5.8e-16 52.4 0.2 4 213 8 309 6 309 0.88 # 4440 # 5414 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.596 1_56 - 439 DivIC PF04977.10 80 0.00045 13.5 5.4 1 2 0.00039 0.073 6.4 0.9 26 55 63 92 48 100 0.74 # 51974 # 53290 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_56 - 439 DivIC PF04977.10 80 0.00045 13.5 5.4 2 2 6.6e-05 0.012 8.9 0.3 21 48 103 130 94 132 0.89 # 51974 # 53290 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_116 - 101 Sigma70_r4 PF04545.11 50 0.00024 14.2 0.0 1 1 4.4e-06 0.00041 13.5 0.0 15 42 36 63 35 67 0.88 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_96 - 313 Sigma70_r4 PF04545.11 50 0.00027 14.0 0.0 1 1 6.5e-06 0.00061 12.9 0.0 5 38 133 167 132 172 0.96 # 79890 # 80828 # -1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 1_105 - 488 AAA PF00004.24 132 6.6e-29 94.6 0.0 1 1 3e-30 2.8e-28 92.5 0.0 1 131 245 371 245 372 0.96 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_33 - 323 AAA PF00004.24 132 0.00063 13.7 0.1 1 1 1.5e-05 0.0014 12.6 0.1 2 33 65 96 64 149 0.83 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_87 - 394 KorB PF08535.5 93 1.6e-31 102.2 0.2 1 1 5.9e-33 5.5e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_96 - 313 KorB PF08535.5 93 1.2e-07 25.6 0.4 1 1 3.4e-09 3.1e-07 24.3 0.4 3 90 149 232 147 235 0.89 # 79890 # 80828 # -1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 2_8 - 547 Cpn60_TCP1 PF00118.19 485 1.2e-128 423.5 10.0 1 1 7.5e-131 1.4e-128 423.3 10.0 1 484 23 524 23 525 0.94 # 4112 # 5752 # 1 # ID=2_8;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.659 1_116 - 101 HTH_37 PF13744.1 80 1.9e-11 37.4 0.3 1 1 1.2e-13 2.2e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_62 - 221 LexA_DNA_bind PF01726.11 65 0.00083 12.7 0.0 1 1 8.2e-06 0.0015 11.9 0.0 39 62 124 147 118 149 0.87 # 55938 # 56600 # -1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.481 1_86 - 91 Rrf2 PF02082.15 83 0.001 13.0 0.4 1 1 1.1e-05 0.0021 12.0 0.4 1 52 1 49 1 74 0.86 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_86 - 91 HTH_43 PF09904.4 90 7.7e-12 38.7 0.0 1 1 4.7e-14 8.7e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_71 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 1 2 5.3e-08 9.9e-06 18.8 4.7 3 37 636 669 634 671 0.90 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 2 2 1.5e-12 2.9e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 91 HTH_27 PF13463.1 68 0.00094 13.3 0.0 1 1 6.4e-06 0.0012 13.0 0.0 8 44 13 48 9 76 0.78 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_91 - 415 N6_N4_Mtase PF01555.13 231 9.8e-25 81.1 0.0 1 1 9.2e-27 1.7e-24 80.3 0.0 1 228 129 389 129 392 0.81 # 77611 # 78855 # -1 # ID=1_91;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_73 - 93 Ribosomal_L2_C PF03947.13 130 0.00093 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 67244 # 67522 # -1 # ID=1_73;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 3_10 - 198 rve_2 PF13333.1 52 2.7e-11 37.2 1.8 1 1 3e-13 5.5e-11 36.2 1.8 1 51 135 189 135 190 0.93 # 7096 # 7689 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_3 - 223 TIGR01083 TIGR01083 192 2.7e-60 196.8 0.0 1 1 1.8e-62 3.4e-60 196.4 0.0 2 188 10 198 9 203 0.97 # 1325 # 1993 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 1_3 - 223 TIGR01084 TIGR01084 277 2.2e-17 56.9 0.0 1 1 1.5e-19 2.7e-17 56.6 0.0 28 207 36 213 11 218 0.86 # 1325 # 1993 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 1_3 - 223 HhH-GPD PF00730.20 108 1.7e-19 63.9 0.0 1 1 1.8e-21 3.4e-19 63.0 0.0 3 107 43 176 41 177 0.95 # 1325 # 1993 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 3_3 - 181 cobW PF02492.14 178 0.0016 11.7 0.0 1 1 1.3e-05 0.0025 11.1 0.0 2 22 2 22 1 30 0.79 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_33 - 323 AAA_16 PF13191.1 185 4.5e-05 17.3 0.8 1 1 2.9e-06 0.00014 15.7 0.0 7 48 47 85 42 102 0.79 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_45 - 816 AAA_16 PF13191.1 185 5.2e-05 17.1 0.2 1 1 6.3e-06 0.0003 14.6 0.2 20 63 447 490 439 659 0.64 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_75 - 206 AAA_16 PF13191.1 185 7.9e-05 16.5 0.1 1 1 2.5e-06 0.00012 15.9 0.1 27 68 11 54 3 168 0.79 # 67755 # 68372 # -1 # ID=1_75;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 3_8 - 140 AAA_16 PF13191.1 185 0.0003 14.6 0.0 1 1 1.1e-05 0.00052 13.8 0.0 8 52 45 91 41 129 0.77 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 3_8 - 140 AAA_22 PF13401.1 131 1e-07 25.9 0.0 1 1 5.2e-09 1.6e-07 25.3 0.0 7 68 64 126 58 136 0.92 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 3_3 - 181 AAA_22 PF13401.1 131 3.1e-05 17.9 0.0 1 1 2e-06 6.2e-05 17.0 0.0 6 37 2 34 1 177 0.84 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_23 - 504 AAA_22 PF13401.1 131 6.1e-05 17.0 0.0 1 2 0.00016 0.005 10.8 0.0 8 68 23 92 17 122 0.63 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 AAA_22 PF13401.1 131 6.1e-05 17.0 0.0 2 2 0.03 0.93 3.4 0.0 82 124 189 225 164 229 0.77 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 323 AAA_22 PF13401.1 131 0.00023 15.1 0.0 1 1 1.6e-05 0.00048 14.1 0.0 5 54 62 103 56 164 0.76 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_67 - 622 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 2.5e-05 0.00078 13.4 0.0 3 68 171 231 166 287 0.83 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_105 - 488 AAA_22 PF13401.1 131 0.0011 12.9 1.0 1 1 0.0022 0.068 7.1 0.8 69 114 283 337 243 354 0.65 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_23 - 504 TIGR01074 TIGR01074 668 2.3e-10 32.7 0.8 1 3 0.0039 0.72 1.4 0.0 8 33 12 38 7 57 0.74 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 TIGR01074 TIGR01074 668 2.3e-10 32.7 0.8 2 3 4.1e-07 7.7e-05 14.5 0.0 205 254 192 238 179 271 0.87 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 TIGR01074 TIGR01074 668 2.3e-10 32.7 0.8 3 3 7.5e-07 0.00014 13.6 0.1 534 614 396 472 347 493 0.80 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_11 - 186 NUMOD1 PF07453.8 37 0.0025 11.5 0.0 1 1 2.6e-05 0.0048 10.6 0.0 20 37 165 182 164 182 0.90 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_86 - 91 HTH_9 PF08221.6 62 0.00051 13.7 0.0 1 1 4.4e-06 0.00083 13.0 0.0 19 51 14 46 11 47 0.90 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_33 - 323 AAA_29 PF13555.1 62 0.0022 11.3 1.0 1 1 2.7e-05 0.005 10.2 0.3 21 38 59 76 54 79 0.86 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_86 - 91 HTH_1 PF00126.22 60 6.7e-05 16.4 0.0 1 1 5.4e-07 0.0001 15.8 0.0 22 51 31 61 30 76 0.79 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_3 - 181 AAA_28 PF13521.1 163 0.00026 14.8 0.0 1 1 2.9e-06 0.00055 13.7 0.0 2 30 3 34 2 165 0.89 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 2_23 - 504 TIGR00609 TIGR00609 1175 7.9e-12 37.5 1.1 1 4 0.0098 1.8 -0.2 0.0 13 27 23 37 13 47 0.82 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 TIGR00609 TIGR00609 1175 7.9e-12 37.5 1.1 2 4 1.4e-10 2.6e-08 25.8 0.0 368 454 190 270 179 282 0.80 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 TIGR00609 TIGR00609 1175 7.9e-12 37.5 1.1 3 4 0.011 2 -0.3 0.0 728 746 412 430 401 437 0.88 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 TIGR00609 TIGR00609 1175 7.9e-12 37.5 1.1 4 4 7.4e-05 0.014 6.8 0.1 789 818 446 475 417 502 0.70 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_116 - 101 HTH_3 PF01381.17 55 8.5e-08 25.8 0.1 1 1 6.6e-10 1.2e-07 25.3 0.1 1 44 33 76 33 84 0.86 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_53 - 421 DDE_Tnp_1_4 PF13701.1 449 6e-27 87.6 3.5 1 2 0.0052 0.97 1.2 0.0 11 42 5 36 3 62 0.72 # 49456 # 50718 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_53 - 421 DDE_Tnp_1_4 PF13701.1 449 6e-27 87.6 3.5 2 2 1.5e-28 2.7e-26 85.4 2.2 137 438 122 418 41 420 0.82 # 49456 # 50718 # -1 # ID=1_53;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.340 1_96 - 313 HTH_23 PF13384.1 50 1.7e-05 18.2 1.4 1 1 9.6e-07 6e-05 16.5 0.1 3 38 134 170 132 176 0.89 # 79890 # 80828 # -1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.555 1_87 - 394 HTH_23 PF13384.1 50 0.00023 14.6 0.2 1 1 2.6e-05 0.0016 11.9 0.0 4 35 122 154 119 161 0.81 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_11 - 186 HTH_23 PF13384.1 50 0.00074 13.0 1.2 1 1 2.1e-05 0.0013 12.2 0.0 10 39 154 183 149 184 0.80 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_11 - 186 HTH_7 PF02796.10 45 8.2e-14 45.1 0.1 1 1 9e-16 1.7e-13 44.1 0.1 1 44 141 184 141 185 0.98 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_9 - 202 Ribosomal_S27e PF01667.12 55 0.00084 12.7 0.5 1 1 8.9e-06 0.0017 11.8 0.5 5 34 79 108 76 112 0.94 # 5941 # 6546 # 1 # ID=2_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.695 1_116 - 101 HTH_19 PF12844.2 64 6.8e-08 26.3 0.0 1 1 5.2e-10 9.8e-08 25.8 0.0 4 52 33 81 31 86 0.95 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_105 - 488 Mg_chelatase PF01078.16 207 0.0011 11.9 0.1 1 1 2.3e-05 0.0021 11.0 0.1 1 47 215 267 215 281 0.79 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_8 - 140 Mg_chelatase PF01078.16 207 0.0012 11.9 0.0 1 1 1.7e-05 0.0016 11.4 0.0 24 53 63 92 60 108 0.86 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_2 - 271 TIGR03413 TIGR03413 248 5.8e-06 19.3 0.7 1 1 6.9e-08 1.3e-05 18.2 0.7 20 96 84 165 76 251 0.71 # 372 # 1184 # 1 # ID=2_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.615 2_18 - 290 DNA_pol_A_exo1 PF01612.15 176 0.00036 13.8 0.2 1 1 1.3e-05 0.0025 11.1 0.2 9 96 93 202 85 272 0.75 # 13070 # 13939 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 3_8 - 140 G-alpha PF00503.15 389 0.0015 11.0 0.0 1 1 9.6e-06 0.0018 10.7 0.0 54 91 57 93 41 106 0.84 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_2 - 282 Methyltransf_31 PF13847.1 152 1.2e-05 18.8 0.0 1 2 0.047 8.8 -0.3 0.0 91 145 6 74 1 80 0.56 # 382 # 1227 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.411 1_2 - 282 Methyltransf_31 PF13847.1 152 1.2e-05 18.8 0.0 2 2 3.1e-07 5.9e-05 16.5 0.0 6 83 131 206 127 239 0.84 # 382 # 1227 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.411 1_33 - 323 Arch_ATPase PF01637.13 234 7.9e-05 16.2 0.0 1 1 7e-07 0.00013 15.5 0.0 4 44 45 85 43 94 0.91 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 2_23 - 504 PhoH PF02562.11 205 4.8e-06 19.7 0.2 1 2 0.0013 0.25 4.3 0.0 22 45 22 45 4 61 0.78 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 PhoH PF02562.11 205 4.8e-06 19.7 0.2 2 2 7.5e-06 0.0014 11.7 0.0 122 168 196 240 193 255 0.83 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_33 - 323 AAA_5 PF07728.9 139 1.8e-18 60.4 0.0 1 1 1.6e-20 3e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_105 - 488 TIGR00763 TIGR00763 795 2.7e-05 16.2 0.0 1 1 1.4e-06 0.00026 12.9 0.0 340 520 227 395 220 406 0.77 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 2_23 - 504 ResIII PF04851.10 184 2e-06 21.5 0.0 1 1 5.5e-08 5.2e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_67 - 622 ResIII PF04851.10 184 0.0002 15.0 0.0 1 1 4.2e-06 0.0004 14.0 0.0 23 57 170 206 129 214 0.74 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_135 - 372 PAPS_reduct PF01507.14 174 6.6e-12 39.4 0.4 1 2 0.014 2.6 1.6 0.0 2 17 53 68 52 91 0.76 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 PAPS_reduct PF01507.14 174 6.6e-12 39.4 0.4 2 2 4.4e-13 8.3e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_67 - 622 TrwB_AAD_bind PF10412.4 386 3.7e-19 62.3 0.0 1 2 8.9e-13 8.3e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_67 - 622 TrwB_AAD_bind PF10412.4 386 3.7e-19 62.3 0.0 2 2 6.9e-10 6.5e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_45 - 816 TrwB_AAD_bind PF10412.4 386 4.2e-08 25.9 0.0 1 2 1.5e-05 0.0014 11.1 0.0 6 72 442 517 438 520 0.85 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_45 - 816 TrwB_AAD_bind PF10412.4 386 4.2e-08 25.9 0.0 2 2 5.6e-06 0.00052 12.4 0.1 232 301 643 712 613 731 0.66 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_88 - 262 TIGR01968 TIGR01968 261 9e-09 28.5 0.2 1 2 5e-07 9.4e-05 15.3 0.1 2 39 3 41 2 45 0.84 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_88 - 262 TIGR01968 TIGR01968 261 9e-09 28.5 0.2 2 2 8.6e-06 0.0016 11.3 0.0 105 135 120 150 111 221 0.79 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 3_3 - 181 AAA_18 PF13238.1 129 1.3e-10 35.5 0.0 1 1 1.2e-12 2.2e-10 34.7 0.0 1 126 3 134 3 137 0.71 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_8 - 140 AAA_32 PF13654.1 509 0.00018 14.0 0.0 1 1 1.2e-06 0.00022 13.7 0.0 8 81 34 112 26 126 0.86 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 3_7 - 325 DDE_Tnp_1_6 PF13751.1 125 5.8e-32 104.1 3.9 1 1 4.6e-34 8.6e-32 103.6 3.9 1 125 187 313 187 313 0.92 # 4440 # 5414 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=4Base/6BMM;rbs_spacer=13-15bp;gc_cont=0.596 1_16 - 576 zf-CHC2 PF01807.15 98 0.0011 12.3 0.0 1 1 1.2e-05 0.0023 11.3 0.0 35 94 40 101 30 105 0.75 # 13050 # 14777 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_12 - 991 Glycos_transf_1 PF00534.15 172 0.00027 14.2 0.0 1 1 2.8e-06 0.00053 13.2 0.0 31 118 280 373 276 374 0.90 # 8254 # 11226 # 1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.604 3_8 - 140 TniB PF05621.6 302 1.4e-91 300.2 1.3 1 1 8.3e-94 1.6e-91 300.0 1.3 1 131 1 131 1 138 0.98 # 6014 # 6433 # -1 # ID=3_8;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 2_18 - 290 TIGR01406 TIGR01406 231 1.1e-18 61.1 0.0 1 1 8.8e-21 1.6e-18 60.6 0.0 3 180 107 280 105 288 0.86 # 13070 # 13939 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_33 - 323 AAA_3 PF07726.6 131 0.00013 15.4 0.0 1 1 1.1e-06 0.00021 14.7 0.0 3 114 65 188 63 212 0.80 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_67 - 622 DUF87 PF01935.12 229 1.6e-08 28.4 0.0 1 1 4.3e-10 4e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_45 - 816 DUF87 PF01935.12 229 6.9e-08 26.3 0.2 1 1 1.5e-09 1.4e-07 25.3 0.2 24 154 452 587 432 660 0.71 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_11 - 186 HTH_28 PF13518.1 52 0.0004 14.2 0.1 1 1 6.4e-06 0.0012 12.7 0.0 16 34 165 183 150 184 0.81 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_86 - 91 HTH_24 PF13412.1 48 3.3e-05 17.0 0.1 1 1 5.5e-07 5.1e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_87 - 394 HTH_24 PF13412.1 48 3.6e-05 16.9 0.3 1 2 0.00032 0.03 7.6 0.2 1 29 104 131 104 131 0.90 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_87 - 394 HTH_24 PF13412.1 48 3.6e-05 16.9 0.3 2 2 0.00047 0.044 7.0 0.0 20 41 139 160 138 161 0.90 # 74711 # 75892 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.499 1_45 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 1 3 0.0039 0.72 3.0 0.0 3 26 452 475 450 503 0.86 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_45 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 2 3 0.0094 1.8 1.8 0.1 75 115 596 637 580 703 0.83 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_45 - 816 Guanylate_kin PF00625.16 183 0.00027 14.2 0.1 3 3 0.001 0.19 4.9 0.0 75 131 714 770 697 777 0.87 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 290 TIGR01298 TIGR01298 200 4.6e-07 23.2 1.0 1 1 7.9e-08 1.5e-05 18.3 1.0 1 195 97 275 97 280 0.82 # 13070 # 13939 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_11 - 186 HTH_10 PF04967.7 53 0.00029 14.2 0.1 1 2 0.061 11 -0.5 0.1 3 30 124 152 123 154 0.66 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_11 - 186 HTH_10 PF04967.7 53 0.00029 14.2 0.1 2 2 1.1e-05 0.0021 11.5 0.0 29 45 167 183 156 184 0.92 # 7694 # 8251 # 1 # ID=1_11;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_67 - 622 DEAD PF00270.24 169 4.3e-05 16.8 0.0 1 1 4.4e-07 8.2e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_116 - 101 HTH_31 PF13560.1 64 1.8e-07 25.1 0.0 1 1 1.4e-09 2.6e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_23 - 504 UvrD_C_2 PF13538.1 104 1.4e-10 35.0 0.0 1 1 3.5e-12 6.5e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_106 - 311 TIGR01973 TIGR01973 606 3.2e-05 16.3 0.8 1 1 2.4e-07 4.6e-05 15.8 0.8 384 504 62 181 59 212 0.84 # 86826 # 87758 # -1 # ID=1_106;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.506 1_33 - 323 T2SE PF00437.15 272 6.5e-05 15.7 0.0 1 1 1.6e-06 0.00015 14.5 0.0 105 148 40 81 9 100 0.77 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_67 - 622 T2SE PF00437.15 272 0.00034 13.3 0.0 1 1 5.9e-06 0.00055 12.6 0.0 116 162 163 206 124 227 0.78 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_34 - 328 StbA PF06406.6 318 0.00012 14.8 0.2 1 3 1.7e-05 0.0031 10.2 0.1 92 176 100 178 88 182 0.75 # 28702 # 29685 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_34 - 328 StbA PF06406.6 318 0.00012 14.8 0.2 2 3 0.042 7.8 -1.0 0.0 3 32 178 207 176 212 0.91 # 28702 # 29685 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 2_34 - 328 StbA PF06406.6 318 0.00012 14.8 0.2 3 3 0.0074 1.4 1.5 0.0 273 303 283 311 253 320 0.82 # 28702 # 29685 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.528 3_3 - 181 NACHT PF05729.7 166 2.9e-05 17.6 0.0 1 2 7.7e-07 0.00014 15.3 0.0 2 22 2 22 1 37 0.89 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 NACHT PF05729.7 166 2.9e-05 17.6 0.0 2 2 0.045 8.5 -0.2 0.0 77 91 151 177 95 179 0.61 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 UPF0079 PF02367.12 123 0.00038 13.9 0.0 1 1 3.3e-06 0.00062 13.2 0.0 17 36 2 21 1 30 0.88 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 AAA_17 PF13207.1 121 1.1e-06 23.2 0.1 1 1 3.5e-08 2.2e-06 22.3 0.1 1 77 2 94 2 173 0.54 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_33 - 323 AAA_17 PF13207.1 121 4.8e-05 18.0 0.0 1 1 1.7e-06 0.0001 16.9 0.0 3 27 65 89 64 166 0.90 # 26907 # 27875 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.539 1_105 - 488 AAA_17 PF13207.1 121 0.00021 15.9 0.0 1 1 1.8e-05 0.0011 13.6 0.0 2 64 245 300 245 384 0.62 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_45 - 816 AAA_25 PF13481.1 194 0.00064 12.9 0.0 1 1 2.5e-05 0.0016 11.6 0.0 36 86 454 494 447 532 0.82 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_88 - 262 AAA_25 PF13481.1 194 0.00072 12.8 0.0 1 1 1.8e-05 0.0011 12.1 0.0 42 91 12 51 11 134 0.78 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_67 - 622 AAA_25 PF13481.1 194 0.00073 12.7 0.0 1 1 3.7e-05 0.0023 11.1 0.0 20 137 159 265 145 272 0.78 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_23 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 1 3 1.4e-05 0.0027 11.0 0.0 2 49 23 73 22 87 0.67 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 2 3 1.8e-05 0.0034 10.7 0.0 56 105 188 234 146 256 0.78 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 Viral_helicase1 PF01443.13 234 1.7e-10 34.6 0.0 3 3 5.2e-05 0.0097 9.2 0.0 176 227 404 462 344 467 0.75 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_4 - 213 PRAI PF00697.17 197 1.9e-44 145.3 0.0 1 1 1.1e-46 2.1e-44 145.2 0.0 1 194 5 205 5 208 0.93 # 1558 # 2196 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.660 2_23 - 504 AAA_14 PF13173.1 128 3e-05 17.7 1.3 1 2 5.1e-05 0.0047 10.6 0.1 11 46 28 62 18 156 0.76 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_23 - 504 AAA_14 PF13173.1 128 3e-05 17.7 1.3 2 2 0.0023 0.21 5.3 0.0 51 99 176 227 127 241 0.73 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 3_3 - 181 AAA_14 PF13173.1 128 0.0011 12.7 0.0 1 1 2.3e-05 0.0021 11.7 0.0 4 27 2 25 1 54 0.79 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_86 - 91 Mga PF05043.8 87 0.00048 14.2 0.1 1 1 3.1e-06 0.00059 13.9 0.1 17 55 9 47 2 62 0.89 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_13 - 335 Transposase_20 PF02371.11 87 2.1e-24 79.3 0.2 1 1 2.3e-26 4.3e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 11305 # 12309 # 1 # ID=1_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.475 3_3 - 181 AAA_33 PF13671.1 143 1.1e-10 35.4 0.0 1 1 2.2e-12 1.4e-10 35.0 0.0 2 127 3 130 2 151 0.75 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_105 - 488 AAA_33 PF13671.1 143 0.00061 13.5 0.0 1 1 2.8e-05 0.0018 12.0 0.0 2 53 245 295 245 396 0.76 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 1_31 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 2.6e-05 0.0016 12.1 0.0 26 102 33 104 23 109 0.75 # 25397 # 25924 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_3 - 223 HHH PF00633.18 30 5.4e-07 22.9 0.0 1 1 7.7e-09 1.4e-06 21.6 0.0 1 25 106 130 106 131 0.93 # 1325 # 1993 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.405 1_67 - 622 ArgK PF03308.11 267 0.0002 13.9 0.0 1 1 1.8e-06 0.00035 13.2 0.0 12 68 158 209 153 214 0.88 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_117 - 98 PaaX PF07848.7 70 0.00019 15.2 0.0 1 1 1.4e-06 0.00026 14.8 0.0 19 70 28 79 10 79 0.88 # 92530 # 92823 # -1 # ID=1_117;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.497 1_67 - 622 T4SS-DNA_transf PF02534.9 469 4.6e-05 15.9 0.0 1 2 5.2e-07 9.7e-05 14.8 0.0 37 115 168 249 125 365 0.73 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_67 - 622 T4SS-DNA_transf PF02534.9 469 4.6e-05 15.9 0.0 2 2 0.097 18 -2.6 0.0 328 389 494 555 474 572 0.74 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_3 - 181 RNA_helicase PF00910.17 107 0.0011 13.0 0.0 1 1 9.1e-06 0.0017 12.3 0.0 1 26 3 28 3 47 0.84 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_105 - 488 AAA_2 PF07724.9 171 6.7e-06 19.9 0.0 1 1 1.9e-07 3.6e-05 17.5 0.0 6 92 245 325 240 333 0.90 # 85289 # 86752 # -1 # ID=1_105;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.512 3_3 - 181 APS_kinase PF01583.15 157 2.6e-05 17.7 0.0 1 2 7.3e-06 0.0014 12.1 0.0 4 24 2 22 1 35 0.87 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 3_3 - 181 APS_kinase PF01583.15 157 2.6e-05 17.7 0.0 2 2 0.0032 0.6 3.5 0.1 34 73 107 148 95 160 0.86 # 1275 # 1817 # 1 # ID=3_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_77 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 1 2 4.1e-11 3.8e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 69084 # 70511 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_77 - 476 DNA_methylase PF00145.12 335 1.1e-10 34.9 0.0 2 2 0.0061 0.57 2.9 0.0 290 330 407 448 341 452 0.73 # 69084 # 70511 # -1 # ID=1_77;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_4 - 265 DNA_methylase PF00145.12 335 2.3e-09 30.6 0.0 1 1 2.9e-11 2.7e-09 30.3 0.0 284 333 196 251 154 253 0.85 # 2321 # 3115 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.682 4_1 - 126 DDE_Tnp_IS1 PF03400.8 131 2.1e-72 235.1 2.5 1 1 3.8e-74 2.4e-72 235.0 2.5 7 131 1 125 1 125 1.00 # 376 # 753 # 1 # ID=4_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.526 2_1 - 38 DDE_Tnp_IS1 PF03400.8 131 5.6e-19 62.3 0.2 1 1 9.5e-21 5.9e-19 62.3 0.2 95 131 1 37 1 37 0.98 # 2 # 115 # 1 # ID=2_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.474 3_1 - 38 DDE_Tnp_IS1 PF03400.8 131 5.6e-19 62.3 0.2 1 1 9.5e-21 5.9e-19 62.3 0.2 95 131 1 37 1 37 0.98 # 2 # 115 # 1 # ID=3_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.474 1_135 - 372 ATP_bind_3 PF01171.15 182 0.00033 14.0 0.0 1 2 6.3e-05 0.012 8.9 0.0 1 59 52 110 52 123 0.78 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 ATP_bind_3 PF01171.15 182 0.00033 14.0 0.0 2 2 0.005 0.94 2.7 0.0 134 161 232 260 207 262 0.72 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 TIGR00420 TIGR00420 351 0.0022 10.3 0.0 1 2 0.00012 0.023 7.0 0.0 2 63 52 109 51 125 0.78 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 1_135 - 372 TIGR00420 TIGR00420 351 0.0022 10.3 0.0 2 2 0.0073 1.4 1.1 0.0 192 223 274 305 245 313 0.89 # 102397 # 103512 # 1 # ID=1_135;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.515 3_10 - 198 DDE_Tnp_IS240 PF13610.1 140 7.2e-15 49.0 0.1 1 1 5.1e-17 9.5e-15 48.6 0.1 2 139 36 174 35 175 0.94 # 7096 # 7689 # 1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.380 1_114 - 183 HTH_26 PF13443.1 63 0.00013 16.0 0.0 1 2 0.0019 0.35 5.0 0.0 8 48 52 91 45 92 0.86 # 91135 # 91683 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.537 1_114 - 183 HTH_26 PF13443.1 63 0.00013 16.0 0.0 2 2 0.00015 0.028 8.5 0.0 39 56 163 180 144 182 0.92 # 91135 # 91683 # -1 # ID=1_114;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.537 1_71 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 1 2 0.0047 0.87 3.5 0.1 23 40 631 647 624 648 0.85 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 2 2 0.00059 0.11 6.3 3.4 20 38 676 693 657 696 0.81 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_16 - 576 Prim_Zn_Ribbon PF08273.7 40 6.3e-14 45.6 4.2 1 1 5.8e-16 1.1e-13 44.9 4.2 1 40 36 74 36 74 0.95 # 13050 # 14777 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_86 - 91 HTH_11 PF08279.7 55 0.00066 13.1 0.0 1 1 4.7e-06 0.00089 12.7 0.0 1 46 9 54 9 70 0.77 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_116 - 101 MarR_2 PF12802.2 62 1.3e-05 18.6 0.0 1 1 1.4e-07 2.7e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_86 - 91 HTH_5 PF01022.15 47 5.2e-06 19.9 0.0 1 1 8.1e-08 7.5e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_116 - 101 HTH_5 PF01022.15 47 0.00082 12.9 0.0 1 1 2e-05 0.0018 11.7 0.0 15 34 41 60 33 60 0.84 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_86 - 91 TrmB PF01978.14 68 0.0017 11.9 0.0 1 1 1.4e-05 0.0026 11.3 0.0 19 48 19 48 11 52 0.85 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_116 - 101 HTH_Crp_2 PF13545.1 76 2.4e-05 17.9 0.0 1 1 2.1e-07 3.9e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 92201 # 92503 # 1 # ID=1_116;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_86 - 91 HTH_Mga PF08280.6 59 1.6e-06 21.6 0.0 1 1 1e-08 1.9e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 74390 # 74662 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_21 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 1 5 0.019 3.5 1.5 8.8 39 98 89 152 77 158 0.72 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 2 5 0.00084 0.16 5.9 3.1 50 100 146 196 143 199 0.89 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 3 5 2.6e-06 0.00048 13.9 12.2 19 100 216 294 201 297 0.85 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 4 5 0.00031 0.057 7.3 2.1 62 105 284 327 282 330 0.90 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 Seryl_tRNA_N PF02403.17 108 0.048 7.5 46.3 5 5 0.0059 1.1 3.1 1.6 82 105 304 327 296 345 0.51 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_18 - 290 RNase_T PF00929.19 164 7.3e-23 75.4 0.0 1 1 5.8e-25 1.1e-22 74.9 0.0 1 163 107 264 107 265 0.94 # 13070 # 13939 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_45 - 816 AAA_10 PF12846.2 304 5.3e-59 193.9 0.2 1 1 9.5e-61 8.8e-59 193.1 0.2 1 296 451 729 451 738 0.93 # 37532 # 39979 # -1 # ID=1_45;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.523 1_67 - 622 AAA_10 PF12846.2 304 2e-18 60.6 0.2 1 1 5.7e-20 5.3e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 58624 # 60489 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 282 Methyltransf_18 PF12847.2 112 2e-05 19.0 0.0 1 1 1.9e-07 3.5e-05 18.2 0.0 5 87 132 211 129 230 0.74 # 382 # 1227 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.411 1_80 - 169 DnaJ_CXXCXGXG PF00684.14 66 3.3e-05 17.7 0.3 1 1 3.3e-07 6.2e-05 16.8 0.3 1 32 6 38 3 49 0.70 # 71341 # 71847 # -1 # ID=1_80;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_23 - 504 UvrD_C PF13361.1 351 1.7e-10 34.6 0.0 1 1 1.7e-12 3.2e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 2_21 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 1 2 0.0019 0.36 2.9 28.3 283 457 85 259 71 272 0.58 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 2_21 - 347 AAA_13 PF13166.1 712 0.012 7.7 36.6 2 2 2.3e-05 0.0044 9.2 23.2 287 474 160 339 154 345 0.78 # 15772 # 16812 # 1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.508 1_88 - 262 ArsA_ATPase PF02374.10 305 1e-05 18.5 0.0 1 2 3e-07 5.7e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_88 - 262 ArsA_ATPase PF02374.10 305 1e-05 18.5 0.0 2 2 0.029 5.4 -0.3 0.0 124 136 124 136 106 143 0.79 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_63 - 126 DYW_deaminase PF14432.1 116 0.001 12.8 0.1 1 1 8.9e-06 0.0017 12.2 0.1 77 111 31 65 18 69 0.82 # 56600 # 56977 # -1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 1_88 - 262 AAA_31 PF13614.1 157 2.4e-10 34.3 0.0 1 1 2.6e-12 4.9e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 75896 # 76681 # -1 # ID=1_88;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_7 - 280 Pterin_bind PF00809.17 210 4.8e-58 189.7 0.0 1 1 3e-60 5.7e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 4241 # 5080 # -1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 2_23 - 504 AAA_11 PF13086.1 236 5.4e-07 23.2 0.1 1 1 1.9e-08 3.5e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 17099 # 18610 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.510 1_31 - 176 SSB PF00436.20 104 2.3e-41 133.7 0.3 1 1 1.5e-43 2.9e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 25397 # 25924 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.547 1_71 - 731 Zn_ribbon_recom PF13408.1 58 8.8e-06 19.8 8.2 1 2 0.00033 0.061 7.5 0.7 8 40 637 668 636 680 0.71 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 731 Zn_ribbon_recom PF13408.1 58 8.8e-06 19.8 8.2 2 2 1.1e-06 0.0002 15.4 1.4 8 41 685 719 685 728 0.80 # 64458 # 66650 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/141f1a49-2016-4c10-9759-8014d86c0f15 # Target file: checkm_output/bins/pm1596/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1596/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/141f1a49-2016-4c10-9759-8014d86c0f15 checkm_output/bins/pm1596/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:47:15 2017 # [ok]