# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_22 - 388 KaiC PF06745.8 227 0.00094 11.4 0.0 1 1 1.5e-05 0.0016 10.6 0.0 14 59 147 191 137 201 0.76 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_10 - 565 K_oxygenase PF13434.1 341 6.4e-06 18.3 0.0 1 3 0.0039 0.44 2.4 0.0 187 220 94 125 59 130 0.79 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 K_oxygenase PF13434.1 341 6.4e-06 18.3 0.0 2 3 3.3e-06 0.00038 12.5 0.0 132 231 218 308 202 332 0.82 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 K_oxygenase PF13434.1 341 6.4e-06 18.3 0.0 3 3 0.057 6.4 -1.4 0.0 132 160 346 369 314 377 0.67 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_17 - 505 HTH_IclR PF09339.5 52 2e-07 23.6 0.2 1 2 8.2e-08 4.6e-06 19.3 0.0 17 41 14 38 1 38 0.81 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_17 - 505 HTH_IclR PF09339.5 52 2e-07 23.6 0.2 2 2 0.04 2.2 1.1 0.0 6 31 427 454 426 455 0.88 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 4_2 - 304 HTH_IclR PF09339.5 52 2.1e-05 17.2 0.3 1 2 6.7e-06 0.00038 13.1 0.1 17 45 15 43 5 52 0.81 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 4_2 - 304 HTH_IclR PF09339.5 52 2.1e-05 17.2 0.3 2 2 0.094 5.3 -0.1 0.0 10 25 47 62 46 65 0.85 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_22 - 388 ABC_tran PF00005.22 137 0.00016 15.1 0.0 1 1 2.7e-06 0.0003 14.2 0.0 16 33 157 174 149 217 0.83 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_26 - 187 HTH_22 PF13309.1 64 6.3e-06 19.0 0.3 1 2 0.045 2.5 1.1 0.0 23 38 70 85 58 87 0.81 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_26 - 187 HTH_22 PF13309.1 64 6.3e-06 19.0 0.3 2 2 2.7e-06 0.00015 14.6 0.0 47 64 166 183 164 183 0.93 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_16 - 515 HTH_22 PF13309.1 64 1.4e-05 17.9 0.2 1 2 3.4e-05 0.0019 11.1 0.0 43 61 136 154 114 156 0.93 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_22 PF13309.1 64 1.4e-05 17.9 0.2 2 2 0.0075 0.42 3.6 0.1 8 34 210 236 203 238 0.84 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_18 - 262 DUF815 PF05673.8 250 0.00025 13.1 0.0 1 1 3.6e-06 0.00041 12.4 0.0 23 76 65 122 46 139 0.79 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_17 - 505 HTH_AsnC-type PF13404.1 42 0.00066 12.3 0.0 1 1 1.6e-05 0.0018 10.9 0.0 18 35 16 33 13 36 0.94 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_16 - 515 rve_3 PF13683.1 67 2.1e-14 45.9 0.1 1 1 1.1e-15 1.2e-13 43.5 0.0 4 67 437 502 434 502 0.95 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_22 - 388 FtsK_SpoIIIE PF01580.13 205 0.00011 14.8 0.0 1 1 1.9e-06 0.00021 13.8 0.0 41 59 155 173 129 184 0.85 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 505 HTH_40 PF14493.1 91 6.7e-05 16.2 0.0 1 1 4.2e-06 0.00047 13.5 0.0 10 36 12 38 6 51 0.90 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_17 - 505 HTH_38 PF13936.1 44 2e-05 17.2 0.2 1 1 3.9e-07 4.3e-05 16.1 0.2 13 41 7 36 5 38 0.87 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_10 - 565 FAD_oxidored PF12831.2 428 3.3e-06 19.4 3.6 1 1 2.9e-08 3.3e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_22 - 388 MobB PF03205.9 140 0.00056 12.7 0.0 1 1 1e-05 0.0012 11.7 0.0 4 25 156 177 154 190 0.85 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_10 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 1 2 4.4e-14 5e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 Pyr_redox_3 PF13738.1 203 1.4e-17 57.4 0.1 2 2 9e-07 0.0001 15.5 0.0 93 147 320 375 309 430 0.76 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_7 PF13241.1 103 3.8e-07 23.4 1.2 1 2 5.4e-05 0.0061 9.9 0.2 9 38 99 128 96 184 0.89 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_7 PF13241.1 103 3.8e-07 23.4 1.2 2 2 1.4e-05 0.0016 11.8 0.1 8 41 270 306 264 380 0.74 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_17 - 83 HTH_8 PF02954.14 42 1.1e-05 18.0 0.1 1 1 3.6e-07 2e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_26 - 187 HTH_8 PF02954.14 42 0.00012 14.7 0.2 1 2 0.047 2.6 0.8 0.1 2 12 114 124 113 124 0.85 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_26 - 187 HTH_8 PF02954.14 42 0.00012 14.7 0.2 2 2 3.2e-05 0.0018 10.9 0.0 20 37 163 180 159 183 0.86 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_17 - 505 TetR_N PF00440.18 47 0.0002 14.1 0.0 1 1 3.9e-06 0.00044 13.0 0.0 15 40 14 39 14 40 0.91 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_18 - 262 AAA_19 PF13245.1 76 4.2e-07 22.8 0.0 1 1 1.9e-08 1.1e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_9 - 1017 AAA_19 PF13245.1 76 0.00057 12.7 0.0 1 1 3.2e-05 0.0018 11.1 0.0 14 31 492 508 481 518 0.90 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_18 - 262 KTI12 PF08433.5 270 0.0002 13.7 0.4 1 2 6.4e-05 0.0072 8.6 0.0 4 81 102 172 101 174 0.68 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 KTI12 PF08433.5 270 0.0002 13.7 0.4 2 2 0.0037 0.41 2.8 0.1 34 59 232 257 212 261 0.77 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_17 - 505 Sigma70_r4_2 PF08281.7 54 6.1e-06 18.8 0.1 1 1 1.7e-07 1.9e-05 17.2 0.0 23 48 12 37 9 38 0.91 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 560 rve PF00665.21 120 2e-26 85.6 0.0 1 1 9.9e-28 3.7e-26 84.7 0.0 2 120 173 313 172 313 0.95 # 7031 # 8710 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_16 - 515 rve PF00665.21 120 2.9e-20 65.7 0.0 1 1 2.8e-21 1e-19 63.9 0.0 2 119 347 462 346 463 0.97 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_17 - 505 rve PF00665.21 120 1.8e-15 50.2 0.2 1 1 9.5e-17 3.6e-15 49.2 0.2 4 119 127 253 125 254 0.95 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_18 - 262 MCM PF00493.18 331 0.00023 13.1 0.0 1 2 7.5e-06 0.00084 11.2 0.0 56 120 98 162 82 172 0.81 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 MCM PF00493.18 331 0.00023 13.1 0.0 2 2 0.034 3.8 -0.8 0.0 161 211 190 237 186 259 0.71 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 388 AAA_23 PF13476.1 202 2.2e-06 21.2 0.1 1 1 4.2e-08 4.7e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 262 AAA_30 PF13604.1 196 0.00052 12.7 0.2 1 2 1.4e-05 0.0016 11.1 0.1 16 49 97 131 87 162 0.73 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 AAA_30 PF13604.1 196 0.00052 12.7 0.2 2 2 0.069 7.8 -0.9 0.0 86 104 149 172 117 179 0.62 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_10 - 565 F420_oxidored PF03807.12 96 0.0079 9.7 4.1 1 2 0.0023 0.26 4.9 1.2 2 31 100 126 99 131 0.87 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 F420_oxidored PF03807.12 96 0.0079 9.7 4.1 2 2 0.0075 0.84 3.3 0.1 1 34 271 300 271 323 0.87 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_27 - 122 CPSase_L_D3 PF02787.14 123 0.00086 12.2 0.2 1 1 1.1e-05 0.0013 11.6 0.2 50 96 45 91 21 103 0.79 # 29091 # 29456 # 1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.426 1_22 - 388 SMC_N PF02463.14 220 0.0013 11.0 0.0 1 1 2.1e-05 0.0024 10.2 0.0 26 50 154 178 147 195 0.81 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_16 - 515 HTH_Tnp_1 PF01527.15 76 2.3e-20 65.5 5.0 1 3 2.1e-06 0.00012 15.2 0.0 7 48 2 44 1 52 0.91 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_Tnp_1 PF01527.15 76 2.3e-20 65.5 5.0 2 3 6.8e-12 3.8e-10 32.7 0.2 3 71 56 126 54 131 0.80 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_Tnp_1 PF01527.15 76 2.3e-20 65.5 5.0 3 3 1.5e-07 8.4e-06 18.8 0.4 12 75 124 203 120 203 0.76 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_26 - 187 HTH_Tnp_1 PF01527.15 76 0.00022 14.3 0.1 1 1 8.9e-06 0.0005 13.1 0.1 15 44 154 182 140 186 0.79 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_2 - 696 TraG-D_C PF12696.2 128 0.00015 14.7 0.1 1 1 2.4e-06 0.00027 13.9 0.1 3 94 437 524 435 556 0.78 # 960 # 3047 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 2_18 - 262 Bac_DnaA PF00308.13 219 1.4e-10 34.2 0.0 1 1 2.1e-12 2.3e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 5_1 - 396 DDE_Tnp_1 PF01609.16 213 2.1e-28 92.4 0.0 1 1 2.6e-30 2.9e-28 91.9 0.0 3 212 83 323 81 324 0.93 # 14 # 1201 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 3_11 - 396 ACT PF01842.20 66 5.7e-05 15.7 0.4 1 3 0.038 4.3 0.1 0.0 13 27 203 217 203 217 0.90 # 4386 # 5573 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 3_11 - 396 ACT PF01842.20 66 5.7e-05 15.7 0.4 2 3 1.7e-05 0.0019 10.8 0.1 7 27 290 310 287 310 0.93 # 4386 # 5573 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 3_11 - 396 ACT PF01842.20 66 5.7e-05 15.7 0.4 3 3 0.076 8.5 -0.9 0.0 30 59 336 363 334 365 0.74 # 4386 # 5573 # -1 # ID=3_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 2_18 - 262 AAA PF00004.24 132 1.2e-07 25.1 0.0 1 1 1.8e-09 2e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_17 - 83 HTH_37 PF13744.1 80 4.8e-05 16.2 0.0 1 1 1.8e-06 9.9e-05 15.2 0.0 24 54 7 37 4 46 0.89 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_10 - 91 HTH_37 PF13744.1 80 0.00096 12.1 0.0 1 1 2.4e-05 0.0013 11.6 0.0 25 53 22 50 19 54 0.92 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_16 - 515 rve_2 PF13333.1 52 5.5e-16 51.5 0.6 1 1 2.2e-17 2.4e-15 49.5 0.0 1 49 453 507 453 509 0.91 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 3_22 - 325 Hydantoinase_A PF01968.13 290 4.4e-08 25.5 2.0 1 2 5e-07 5.6e-05 15.4 0.1 67 96 158 186 144 195 0.82 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_22 - 325 Hydantoinase_A PF01968.13 290 4.4e-08 25.5 2.0 2 2 3.2e-05 0.0036 9.5 0.2 212 265 248 301 191 322 0.76 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_6 - 145 MerR_1 PF13411.1 69 1e-19 63.2 0.0 1 1 6e-21 1.7e-19 62.5 0.0 2 67 9 75 8 77 0.96 # 2290 # 2724 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.593 2_11 - 121 MerR_1 PF13411.1 69 6.1e-14 44.7 0.0 1 1 3.5e-15 9.9e-14 44.0 0.0 1 68 4 72 4 73 0.97 # 5657 # 6019 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_17 - 505 MerR_1 PF13411.1 69 0.00012 15.0 0.0 1 1 1.1e-05 0.00031 13.6 0.0 2 30 17 45 16 51 0.90 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_16 - 515 MerR_1 PF13411.1 69 0.00017 14.4 1.0 1 1 7.7e-05 0.0021 10.9 0.0 3 56 138 195 137 207 0.85 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_15 - 287 AAA_16 PF13191.1 185 1.5e-05 18.1 0.0 1 2 2.3e-05 0.00087 12.3 0.0 8 52 45 94 43 146 0.70 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_15 - 287 AAA_16 PF13191.1 185 1.5e-05 18.1 0.0 2 2 0.012 0.43 3.6 0.0 139 183 134 184 114 186 0.72 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_18 - 262 AAA_16 PF13191.1 185 0.00016 14.7 0.1 1 1 1e-05 0.00038 13.5 0.1 23 51 98 126 84 166 0.79 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 388 AAA_16 PF13191.1 185 0.00099 12.2 0.0 1 1 5.3e-05 0.002 11.2 0.0 26 50 154 178 140 211 0.85 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_15 - 287 AAA_22 PF13401.1 131 4.2e-17 55.6 0.0 1 1 2.7e-18 7.5e-17 54.8 0.0 7 126 64 190 59 194 0.94 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_18 - 262 AAA_22 PF13401.1 131 3.1e-06 20.5 0.1 1 2 1.1e-05 0.00031 14.0 0.2 2 28 97 123 96 159 0.74 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 AAA_22 PF13401.1 131 3.1e-06 20.5 0.1 2 2 0.0083 0.23 4.7 0.0 87 117 151 196 132 204 0.62 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 388 AAA_22 PF13401.1 131 3.2e-06 20.4 0.0 1 1 2.9e-07 8e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_9 - 1017 AAA_22 PF13401.1 131 0.00023 14.4 0.0 1 1 2.7e-05 0.00075 12.7 0.0 8 73 492 561 486 594 0.70 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_11 - 121 DUF977 PF06163.6 127 0.00034 13.5 0.1 1 1 5.9e-06 0.00066 12.5 0.0 27 70 4 47 2 65 0.90 # 5657 # 6019 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_18 - 262 TIGR00362 TIGR00362 437 5.1e-13 41.5 0.0 1 1 7.2e-15 8e-13 40.9 0.0 138 240 100 200 77 220 0.90 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_41 - 287 Methyltransf_27 PF13708.1 194 1.5e-68 223.2 0.0 1 1 2.3e-70 2.5e-68 222.5 0.0 2 194 89 282 88 282 0.97 # 35097 # 35957 # -1 # ID=1_41;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_26 - 187 NUMOD1 PF07453.8 37 0.0006 12.8 0.0 1 1 1.1e-05 0.0012 11.8 0.0 19 37 164 182 164 182 0.94 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_22 - 388 AAA_29 PF13555.1 62 9.9e-06 18.1 0.1 1 1 4.4e-07 2.5e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 262 AAA_29 PF13555.1 62 1.5e-05 17.5 0.0 1 1 5.6e-07 3.1e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_10 - 565 Pyr_redox PF00070.22 80 4e-20 65.1 6.0 1 2 1.4e-06 0.00016 15.2 1.5 1 31 99 129 99 131 0.96 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 Pyr_redox PF00070.22 80 4e-20 65.1 6.0 2 2 6.2e-18 7e-16 51.6 0.2 1 74 271 345 271 354 0.90 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 4_2 - 304 HTH_1 PF00126.22 60 2.4e-19 62.0 0.7 1 1 3.7e-21 4.2e-19 61.2 0.7 2 59 5 62 4 63 0.96 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 2_17 - 505 HTH_Tnp_Tc3_1 PF11427.3 50 0.0007 12.3 0.1 1 1 1.6e-05 0.0018 11.0 0.1 20 42 15 37 11 41 0.91 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_26 - 187 HTH_Tnp_IS630 PF01710.11 120 3.7e-05 16.5 0.0 1 1 6.4e-07 7.2e-05 15.6 0.0 10 42 157 185 151 186 0.86 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_18 - 262 AAA_28 PF13521.1 163 1e-05 18.6 1.1 1 1 4.6e-07 5.1e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_10 - 565 HI0933_like PF03486.9 409 2.5e-08 25.8 3.7 1 2 1.2e-06 0.00013 13.5 2.5 2 33 99 130 98 138 0.91 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 HI0933_like PF03486.9 409 2.5e-08 25.8 3.7 2 2 7.2e-06 0.00081 10.9 0.0 82 164 284 366 276 385 0.83 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_26 - 187 HTH_32 PF13565.1 77 0.0008 13.3 5.4 1 2 0.081 9.1 0.3 0.0 26 60 36 72 19 92 0.54 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_26 - 187 HTH_32 PF13565.1 77 0.0008 13.3 5.4 2 2 2.6e-05 0.003 11.5 3.5 7 77 124 182 119 182 0.68 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_17 - 83 HTH_3 PF01381.17 55 2.1e-09 30.2 0.1 1 1 1.6e-10 3.5e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_31 - 89 HTH_3 PF01381.17 55 1.2e-06 21.4 0.0 1 1 7e-08 1.6e-06 21.0 0.0 8 36 41 69 33 78 0.88 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 3_10 - 91 HTH_3 PF01381.17 55 7e-05 15.7 0.0 1 1 4.5e-06 0.0001 15.2 0.0 2 32 21 51 21 55 0.90 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_26 - 160 HTH_3 PF01381.17 55 0.00017 14.6 0.1 1 2 0.0036 0.081 5.9 0.0 2 20 15 33 14 37 0.91 # 13826 # 14305 # 1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_26 - 160 HTH_3 PF01381.17 55 0.00017 14.6 0.1 2 2 0.0027 0.062 6.3 0.0 1 23 96 118 96 120 0.89 # 13826 # 14305 # 1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 2_26 - 187 HTH_3 PF01381.17 55 0.00047 13.1 0.4 1 1 5.7e-05 0.0013 11.7 0.4 2 31 152 183 151 184 0.86 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_16 - 515 HTH_23 PF13384.1 50 5.1e-10 31.9 1.7 1 2 0.0044 0.071 6.0 0.1 2 30 2 31 1 45 0.90 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_23 PF13384.1 50 5.1e-10 31.9 1.7 2 2 1.6e-08 2.6e-07 23.3 0.1 5 41 123 159 119 166 0.76 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_17 - 505 HTH_23 PF13384.1 50 4.3e-07 22.6 0.5 1 1 8.4e-08 1.3e-06 21.0 0.5 14 39 12 37 2 39 0.87 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_14 - 560 HTH_23 PF13384.1 50 4.5e-07 22.5 0.9 1 1 1.1e-07 1.8e-06 20.6 0.9 3 45 23 71 21 76 0.87 # 7031 # 8710 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 3_31 - 89 HTH_23 PF13384.1 50 7.8e-06 18.6 0.0 1 1 7.4e-07 1.2e-05 18.0 0.0 16 39 38 64 33 68 0.83 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 3_10 - 91 HTH_23 PF13384.1 50 9e-06 18.4 0.1 1 1 9.4e-07 1.5e-05 17.7 0.1 12 38 23 49 19 54 0.85 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_26 - 187 HTH_23 PF13384.1 50 2.6e-05 16.9 1.3 1 1 2e-06 3.3e-05 16.6 0.1 10 39 151 183 148 184 0.82 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_17 - 83 HTH_23 PF13384.1 50 5e-05 16.0 0.0 1 1 6.1e-06 9.8e-05 15.1 0.0 15 34 10 31 6 40 0.81 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_26 - 187 HTH_7 PF02796.10 45 1.4e-16 53.3 0.3 1 1 4.7e-18 2.7e-16 52.3 0.3 1 44 141 184 141 185 0.98 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_17 - 505 HTH_7 PF02796.10 45 5.4e-06 19.3 0.1 1 1 2.3e-07 1.3e-05 18.1 0.1 20 43 14 37 12 39 0.92 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_17 - 83 HTH_19 PF12844.2 64 4.5e-08 26.2 0.0 1 1 1.7e-09 6.4e-08 25.7 0.0 8 45 10 47 8 56 0.86 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_10 - 91 HTH_19 PF12844.2 64 9.7e-06 18.7 0.0 1 1 3.4e-07 1.3e-05 18.3 0.0 5 35 21 51 21 66 0.92 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_31 - 89 HTH_19 PF12844.2 64 9.4e-05 15.5 0.0 1 1 3.4e-06 0.00013 15.1 0.0 4 39 33 69 30 73 0.85 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_18 - 262 Mg_chelatase PF01078.16 207 0.00057 12.1 0.0 1 1 1.1e-05 0.0012 11.1 0.0 23 43 100 120 96 153 0.86 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_16 - 515 HTH_29 PF13551.1 112 3e-07 23.7 8.9 1 2 0.002 0.075 6.3 1.0 6 90 13 98 7 119 0.68 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_29 PF13551.1 112 3e-07 23.7 8.9 2 2 5.6e-08 2.1e-06 21.0 0.1 3 97 126 218 124 221 0.77 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_14 - 560 HTH_29 PF13551.1 112 3.8e-06 20.1 0.3 1 1 1e-07 3.8e-06 20.1 0.3 13 77 39 109 27 132 0.79 # 7031 # 8710 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_17 - 505 HTH_29 PF13551.1 112 0.00037 13.7 0.0 1 1 2.8e-05 0.001 12.3 0.0 9 34 13 37 9 66 0.92 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_10 - 565 Glyco_trans_4_4 PF13579.1 160 0.00022 14.5 1.7 1 1 4.2e-06 0.00047 13.4 0.1 2 26 276 306 276 340 0.70 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_9 PF13454.1 156 3.2e-05 16.8 2.8 1 3 0.0081 0.91 2.3 0.1 1 41 101 135 101 162 0.81 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_9 PF13454.1 156 3.2e-05 16.8 2.8 2 3 0.034 3.8 0.3 0.0 134 155 218 241 202 242 0.72 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_9 PF13454.1 156 3.2e-05 16.8 2.8 3 3 6.6e-06 0.00074 12.4 0.1 112 155 321 366 311 367 0.85 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 GIDA PF01134.17 392 2.9e-08 26.0 6.6 1 3 3.5e-10 3.9e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 GIDA PF01134.17 392 2.9e-08 26.0 6.6 2 3 0.038 4.2 -0.9 0.0 3 31 273 301 271 315 0.84 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 GIDA PF01134.17 392 2.9e-08 26.0 6.6 3 3 0.018 2.1 0.1 0.1 349 385 393 429 387 433 0.77 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_8 PF13450.1 68 3.9e-05 16.7 1.2 1 2 3.5e-07 3.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 NAD_binding_8 PF13450.1 68 3.9e-05 16.7 1.2 2 2 0.041 4.6 0.5 0.2 1 25 274 298 274 303 0.81 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_18 - 262 PhoH PF02562.11 205 1.4e-08 27.2 0.1 1 1 2.9e-10 3.3e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 AAA_5 PF07728.9 139 0.00021 14.1 0.2 1 1 4.3e-06 0.00048 12.9 0.2 1 19 101 119 101 243 0.78 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_2 - 696 TrwB_AAD_bind PF10412.4 386 2.1e-06 19.6 0.9 1 3 1.7e-05 0.0019 9.8 0.0 16 36 134 154 125 158 0.88 # 960 # 3047 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_2 - 696 TrwB_AAD_bind PF10412.4 386 2.1e-06 19.6 0.9 2 3 9.3e-05 0.01 7.4 0.1 93 140 235 281 229 303 0.80 # 960 # 3047 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_2 - 696 TrwB_AAD_bind PF10412.4 386 2.1e-06 19.6 0.9 3 3 0.083 9.3 -2.3 0.0 293 323 482 512 405 546 0.58 # 960 # 3047 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_9 - 1017 AAA_18 PF13238.1 129 9.5e-05 15.8 1.3 1 1 3.5e-06 0.0004 13.8 0.0 2 19 492 509 492 571 0.76 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_15 - 287 AAA_32 PF13654.1 509 0.00016 13.5 0.1 1 2 6.6e-06 0.00074 11.3 0.0 8 81 34 112 26 124 0.86 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_15 - 287 AAA_32 PF13654.1 509 0.00016 13.5 0.1 2 2 0.02 2.3 -0.3 0.1 472 502 255 285 242 286 0.89 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 3_6 - 435 IMS_HHH PF11798.3 32 0.00056 13.1 0.0 1 1 1.5e-05 0.0016 11.6 0.0 12 32 192 212 182 212 0.83 # 1513 # 2817 # 1 # ID=3_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.591 2_26 - 187 HTH_psq PF05225.11 45 0.00014 14.5 0.0 1 1 2.5e-06 0.00028 13.5 0.0 21 39 166 184 165 186 0.91 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_15 - 287 TniB PF05621.6 302 3.9e-201 659.2 5.6 1 1 3.8e-203 4.3e-201 659.0 5.6 1 285 1 285 1 286 1.00 # 8713 # 9573 # 1 # ID=2_15;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.656 2_18 - 262 AAA_3 PF07726.6 131 0.00057 12.6 0.0 1 1 1.2e-05 0.0014 11.4 0.0 2 72 102 171 101 201 0.70 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_22 - 388 DUF87 PF01935.12 229 0.0001 15.2 0.0 1 1 1.8e-06 0.0002 14.2 0.0 28 45 157 174 155 188 0.89 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_16 - 515 HTH_28 PF13518.1 52 3.7e-11 36.0 5.0 1 3 0.0001 0.0019 11.3 0.8 1 39 6 46 6 58 0.91 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_28 PF13518.1 52 3.7e-11 36.0 5.0 2 3 0.036 0.67 3.2 0.2 1 36 64 101 64 102 0.86 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_28 PF13518.1 52 3.7e-11 36.0 5.0 3 3 9.9e-08 1.9e-06 20.9 0.0 2 46 124 167 123 174 0.78 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_14 - 560 HTH_28 PF13518.1 52 9.3e-09 28.3 0.1 1 1 2.1e-09 3.9e-08 26.3 0.1 1 46 26 78 26 87 0.76 # 7031 # 8710 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_17 - 505 HTH_28 PF13518.1 52 7.1e-06 19.1 0.4 1 1 1.2e-06 2.2e-05 17.5 0.4 5 34 6 37 3 38 0.82 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_26 - 187 HTH_28 PF13518.1 52 5.4e-05 16.3 0.1 1 1 2.9e-06 5.4e-05 16.3 0.1 9 34 158 183 147 184 0.84 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_31 - 89 HTH_28 PF13518.1 52 7e-05 15.9 0.0 1 1 5.2e-06 9.7e-05 15.4 0.0 7 34 34 64 33 68 0.82 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 3_17 - 83 HTH_28 PF13518.1 52 0.00047 13.3 0.1 1 1 5.5e-05 0.001 12.2 0.1 8 29 8 31 6 35 0.78 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_18 - 262 DnaB_C PF03796.10 259 0.00017 13.6 0.0 1 1 2.4e-06 0.00027 12.9 0.0 16 55 96 135 85 158 0.90 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_6 - 145 MerR-DNA-bind PF09278.6 65 2.4e-21 69.1 0.6 1 1 9.7e-23 5.4e-21 67.9 0.5 1 65 51 113 51 113 0.95 # 2290 # 2724 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.593 2_11 - 121 MerR-DNA-bind PF09278.6 65 0.00089 12.8 7.4 1 1 2.5e-05 0.0014 12.1 7.4 1 64 47 108 47 109 0.85 # 5657 # 6019 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_17 - 505 HTH_24 PF13412.1 48 3.6e-07 22.6 0.1 1 1 1e-08 1.2e-06 21.0 0.1 7 39 2 37 1 39 0.90 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_18 - 262 Sigma54_activ_2 PF14532.1 138 0.00033 13.8 0.1 1 1 7.7e-06 0.00086 12.4 0.0 3 44 79 122 77 151 0.81 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_17 - 505 HTH_30 PF13556.1 59 0.00019 14.1 0.3 1 1 5.2e-06 0.00058 12.6 0.1 7 34 10 37 8 38 0.90 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_26 - 187 HTH_10 PF04967.7 53 1.3e-05 17.8 0.2 1 2 0.055 6.1 -0.3 0.1 3 18 124 139 123 154 0.71 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_26 - 187 HTH_10 PF04967.7 53 1.3e-05 17.8 0.2 2 2 8.6e-07 9.6e-05 15.0 0.0 27 45 165 183 162 185 0.93 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_10 - 565 TIGR01292 TIGR01292 300 1.8e-19 62.3 2.9 1 2 3.8e-05 0.0043 8.6 1.1 3 39 100 136 98 142 0.89 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 TIGR01292 TIGR01292 300 1.8e-19 62.3 2.9 2 2 1.1e-18 1.2e-16 53.1 0.0 142 296 270 428 213 430 0.81 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_22 - 388 Miro PF08477.8 119 0.0011 12.6 0.0 1 1 2.1e-05 0.0024 11.5 0.0 4 28 157 186 156 220 0.72 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_17 - 83 HTH_31 PF13560.1 64 2.1e-09 30.6 0.9 1 1 1.2e-10 2.8e-09 30.2 0.9 9 56 9 55 6 72 0.90 # 8661 # 8909 # 1 # ID=3_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 3_10 - 91 HTH_31 PF13560.1 64 3.2e-07 23.6 0.4 1 1 2.3e-08 5.1e-07 22.9 0.3 7 36 21 50 17 65 0.89 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_26 - 160 HTH_31 PF13560.1 64 7.6e-07 22.4 1.2 1 2 0.0058 0.13 5.6 0.0 6 33 14 41 12 48 0.88 # 13826 # 14305 # 1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_26 - 160 HTH_31 PF13560.1 64 7.6e-07 22.4 1.2 2 2 4.6e-06 0.0001 15.6 0.3 4 39 94 129 91 135 0.88 # 13826 # 14305 # 1 # ID=3_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_31 - 89 HTH_31 PF13560.1 64 2.3e-06 20.9 0.0 1 1 1.4e-07 3.1e-06 20.4 0.0 2 42 29 69 28 80 0.84 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_17 - 505 HTH_31 PF13560.1 64 0.00049 13.4 0.2 1 1 5.6e-05 0.0013 12.1 0.2 12 43 13 44 4 54 0.82 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_9 - 1017 DUF2075 PF09848.4 352 0.0004 12.5 0.0 1 1 1.1e-05 0.0012 10.8 0.0 5 22 492 509 489 537 0.87 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_17 - 505 HTH_36 PF13730.1 55 1.3e-05 18.4 0.0 1 1 2.9e-07 3.3e-05 17.1 0.0 26 47 16 37 2 38 0.88 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_22 - 388 T2SE PF00437.15 272 3.2e-23 75.0 0.0 1 1 4.6e-25 5.2e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_14 - 560 HTH_Tnp_Mu_2 PF09039.6 108 1.1e-05 18.2 0.0 1 1 2.8e-07 3.1e-05 16.8 0.0 37 101 100 163 83 166 0.91 # 7031 # 8710 # 1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 3_22 - 325 StbA PF06406.6 318 8.1e-157 514.1 0.2 1 1 8.1e-159 9e-157 513.9 0.2 1 318 1 322 1 322 0.99 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_22 - 388 NACHT PF05729.7 166 0.00038 13.2 0.0 1 1 1.3e-05 0.00074 12.3 0.0 4 29 156 181 154 188 0.83 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 262 NACHT PF05729.7 166 0.0014 11.4 2.1 1 2 0.00012 0.0066 9.2 0.3 3 23 102 122 100 148 0.84 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 NACHT PF05729.7 166 0.0014 11.4 2.1 2 2 0.023 1.3 1.7 0.1 80 127 156 200 139 221 0.76 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_9 - 1017 AAA_17 PF13207.1 121 6.9e-05 16.8 0.0 1 1 8.5e-06 0.00048 14.0 0.0 3 27 492 522 492 581 0.72 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_18 - 262 AAA_17 PF13207.1 121 0.00012 15.9 0.0 1 1 3.1e-06 0.00018 15.4 0.0 2 38 102 133 101 232 0.74 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_10 - 565 FAD_binding_2 PF00890.19 417 4.8e-06 18.6 4.7 1 3 4.3e-08 4.8e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 FAD_binding_2 PF00890.19 417 4.8e-06 18.6 4.7 2 3 0.034 3.8 -0.8 0.1 143 204 311 369 297 388 0.72 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 FAD_binding_2 PF00890.19 417 4.8e-06 18.6 4.7 3 3 0.074 8.3 -1.9 0.0 376 402 388 408 377 424 0.82 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_22 - 388 AAA_25 PF13481.1 194 6.5e-06 18.7 0.0 1 1 2.6e-07 1.5e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_18 - 262 AAA_25 PF13481.1 194 0.00012 14.6 0.0 1 1 3.6e-06 0.0002 13.8 0.0 29 57 95 123 76 170 0.86 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_34 - 147 RepA_N PF06970.6 76 0.0009 12.1 0.0 1 1 1.6e-05 0.0018 11.2 0.0 15 44 56 85 53 90 0.92 # 32204 # 32644 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.549 2_18 - 262 RuvB_N PF05496.7 234 0.00059 12.0 0.0 1 1 7.1e-06 0.0008 11.5 0.0 48 75 97 124 45 170 0.84 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 3_22 - 325 Hydant_A_N PF05378.8 176 0.00074 12.1 3.4 1 4 0.069 7.7 -1.0 0.0 1 19 2 20 2 52 0.83 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_22 - 325 Hydant_A_N PF05378.8 176 0.00074 12.1 3.4 2 4 0.057 6.4 -0.7 0.0 108 154 38 86 17 98 0.66 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_22 - 325 Hydant_A_N PF05378.8 176 0.00074 12.1 3.4 3 4 0.057 6.4 -0.7 0.0 95 129 113 147 89 153 0.76 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_22 - 325 Hydant_A_N PF05378.8 176 0.00074 12.1 3.4 4 4 3.6e-05 0.0041 9.7 0.2 2 51 170 217 169 226 0.82 # 11216 # 12190 # 1 # ID=3_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 3_31 - 89 HTH_Tnp_ISL3 PF13542.1 52 0.00041 12.6 0.0 1 1 5e-06 0.00056 12.2 0.0 19 49 35 64 33 65 0.91 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_6 - 145 MerR PF00376.18 38 9.1e-14 43.9 0.2 1 1 4.5e-15 1.7e-13 43.1 0.2 1 38 9 46 9 46 0.99 # 2290 # 2724 # -1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.593 2_11 - 121 MerR PF00376.18 38 1.4e-06 20.9 0.0 1 1 5.9e-08 2.2e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 5657 # 6019 # 1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 2_17 - 505 MerR PF00376.18 38 0.00014 14.5 0.1 1 1 8.7e-06 0.00033 13.3 0.1 1 28 17 43 17 48 0.85 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_18 - 262 AAA_33 PF13671.1 143 0.00041 13.3 0.2 1 1 8.9e-06 0.001 12.1 0.2 2 36 102 142 102 255 0.67 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_26 - 187 CENP-B_N PF04218.8 53 3.2e-06 19.6 0.0 1 1 1.1e-07 6e-06 18.7 0.0 17 43 156 182 152 186 0.92 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_31 - 89 CENP-B_N PF04218.8 53 0.0016 11.0 0.0 1 1 3.8e-05 0.0021 10.6 0.0 24 49 44 69 34 72 0.88 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 1_22 - 388 Ribosomal_S5 PF00333.15 67 3.4e-05 16.7 0.1 1 2 0.00091 0.1 5.5 0.0 26 45 84 103 76 114 0.83 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_22 - 388 Ribosomal_S5 PF00333.15 67 3.4e-05 16.7 0.1 2 2 0.00012 0.013 8.4 0.0 21 54 242 274 230 278 0.91 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_22 - 388 RNA_helicase PF00910.17 107 0.0013 12.1 0.0 1 1 2.5e-05 0.0028 10.9 0.0 3 26 157 180 156 197 0.81 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_10 - 565 AlaDh_PNT_C PF01262.16 168 2.7e-05 16.9 3.1 1 2 0.00051 0.058 6.0 0.8 15 50 92 127 89 130 0.90 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 AlaDh_PNT_C PF01262.16 168 2.7e-05 16.9 3.1 2 2 2.1e-05 0.0024 10.5 0.1 16 58 265 307 257 339 0.84 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 3HCDH_N PF02737.13 180 0.0036 10.0 6.4 1 2 0.0047 0.53 2.9 2.4 1 30 99 128 99 134 0.93 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 3HCDH_N PF02737.13 180 0.0036 10.0 6.4 2 2 9e-05 0.01 8.6 0.1 2 39 272 309 271 348 0.73 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_10 - 91 Mor PF08765.6 108 0.00083 12.2 0.0 1 1 9.2e-06 0.001 11.9 0.0 71 93 27 49 18 57 0.85 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_31 - 89 Phage_CII PF05269.6 91 0.00081 12.5 0.0 1 1 9.2e-06 0.001 12.2 0.0 17 45 36 64 32 81 0.83 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_10 - 565 Glyco_transf_4 PF13439.1 177 6.8e-06 19.0 0.1 1 1 1.3e-07 1.5e-05 17.8 0.1 13 40 276 303 272 356 0.82 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_22 - 388 ATP_bind_1 PF03029.12 238 0.00091 11.8 0.0 1 1 1.3e-05 0.0015 11.2 0.0 1 25 157 181 157 191 0.84 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 66 DDE_Tnp_IS240 PF13610.1 140 0.00029 13.9 0.0 1 1 2.8e-06 0.00031 13.8 0.0 29 64 18 52 5 58 0.83 # 19681 # 19878 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.460 3_10 - 91 HTH_26 PF13443.1 63 0.00013 15.3 0.0 1 1 3.3e-06 0.00018 14.8 0.0 4 34 22 52 21 56 0.91 # 4095 # 4367 # -1 # ID=3_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_31 - 89 HTH_26 PF13443.1 63 0.0003 14.1 0.0 1 1 7.2e-06 0.0004 13.7 0.0 11 47 43 78 33 82 0.90 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_16 - 515 HTH_17 PF12728.2 51 4.9e-07 23.0 3.7 1 3 4.5e-05 0.0025 11.2 0.0 4 21 138 155 137 173 0.84 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_17 PF12728.2 51 4.9e-07 23.0 3.7 2 3 0.0015 0.085 6.3 0.2 12 39 301 327 300 329 0.91 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_17 PF12728.2 51 4.9e-07 23.0 3.7 3 3 0.028 1.5 2.2 0.0 22 40 406 426 399 427 0.78 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_17 - 505 HTH_17 PF12728.2 51 0.00049 13.5 0.0 1 1 3.7e-05 0.002 11.5 0.0 3 25 17 39 17 53 0.90 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_26 - 187 HTH_11 PF08279.7 55 0.00014 14.6 0.1 1 1 2.5e-05 0.0014 11.4 0.0 20 37 166 183 162 184 0.91 # 19370 # 19930 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_17 - 505 HTH_11 PF08279.7 55 0.00054 12.7 0.2 1 1 2.6e-05 0.0015 11.3 0.1 16 37 16 37 11 38 0.89 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 4_2 - 304 MarR_2 PF12802.2 62 0.00014 14.6 0.1 1 1 8e-06 0.00089 12.0 0.1 25 48 20 43 8 52 0.89 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 2_17 - 505 TrmB PF01978.14 68 0.00023 14.0 0.0 1 1 8e-06 0.0009 12.1 0.1 22 45 15 38 13 38 0.92 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_17 - 505 LacI PF00356.16 46 0.00022 13.9 0.0 1 1 4.1e-06 0.00046 12.9 0.0 1 23 17 39 17 44 0.91 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_10 - 565 Pyr_redox_2 PF07992.9 201 8.9e-44 142.8 0.0 1 1 3.2e-45 3.6e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 DFP PF04127.10 185 0.00087 12.0 2.4 1 2 0.00039 0.044 6.4 0.4 28 51 105 128 99 156 0.83 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 DFP PF04127.10 185 0.00087 12.0 2.4 2 2 0.0014 0.15 4.7 0.1 32 53 281 302 276 336 0.77 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 3_31 - 89 HTH_Crp_2 PF13545.1 76 0.00051 12.9 0.0 1 1 6.6e-06 0.00074 12.4 0.0 26 50 40 64 32 65 0.88 # 16125 # 16391 # 1 # ID=3_31;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.581 2_10 - 565 DAO PF01266.19 358 4.7e-09 28.6 11.7 1 3 1.4e-08 1.5e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 DAO PF01266.19 358 4.7e-09 28.6 11.7 2 3 0.032 3.5 -0.6 0.1 3 31 273 301 271 307 0.75 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 2_10 - 565 DAO PF01266.19 358 4.7e-09 28.6 11.7 3 3 9.4e-07 0.00011 14.3 0.5 152 208 314 372 307 433 0.74 # 3945 # 5639 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.652 1_9 - 1017 AAA_10 PF12846.2 304 9.3e-41 133.2 0.1 1 1 5.5e-42 2e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 10719 # 13769 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_2 - 696 AAA_10 PF12846.2 304 7e-10 31.8 0.0 1 1 2.8e-11 1e-09 31.2 0.0 2 292 134 503 133 514 0.76 # 960 # 3047 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_22 - 388 AAA_10 PF12846.2 304 1.6e-06 20.8 0.0 1 1 2.5e-07 9.3e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 505 HTH_20 PF12840.2 61 0.00022 14.1 0.2 1 1 5.5e-06 0.00062 12.7 0.0 13 45 1 36 1 38 0.94 # 11300 # 12814 # 1 # ID=2_17;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_20 - 280 Pterin_bind PF00809.17 210 2.9e-58 189.7 0.0 1 1 3e-60 3.4e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 14390 # 15229 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 2_18 - 262 IstB_IS21 PF01695.12 178 3.5e-69 224.8 0.1 1 1 4.1e-71 4.6e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 2_18 - 262 AAA_11 PF13086.1 236 0.00051 12.7 0.3 1 1 8.7e-06 0.00097 11.8 0.3 6 44 89 142 82 260 0.72 # 12801 # 13586 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.501 1_31 - 145 SSB PF00436.20 104 8.3e-31 99.1 0.3 1 1 8.5e-33 9.6e-31 98.9 0.3 2 103 7 111 6 112 0.96 # 30994 # 31428 # -1 # ID=1_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 2_16 - 515 HTH_21 PF13276.1 60 1.1e-15 50.6 5.4 1 2 0.069 7.8 -0.2 0.2 8 33 37 63 31 73 0.76 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_16 - 515 HTH_21 PF13276.1 60 1.1e-15 50.6 5.4 2 2 9.5e-18 1.1e-15 50.6 5.4 6 60 271 324 266 325 0.88 # 9624 # 11168 # -1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_22 - 388 GTP_EFTU PF00009.22 188 0.0012 11.4 0.0 1 1 2e-05 0.0022 10.5 0.0 8 34 157 183 155 195 0.87 # 24069 # 25232 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/73c2facd-9000-4d32-8464-b19f72120b50 # Target file: checkm_output/bins/pm1589/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1589/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/73c2facd-9000-4d32-8464-b19f72120b50 checkm_output/bins/pm1589/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:47:01 2017 # [ok]