# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 310 MutS_IV PF05190.13 92 0.00019 10.8 4.0 1 2 0.0014 0.0096 5.4 0.1 35 69 47 81 35 84 0.80 # 1768 # 2697 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_2 - 310 MutS_IV PF05190.13 92 0.00019 10.8 4.0 2 2 0.00099 0.0069 5.8 1.0 2 55 240 294 239 308 0.80 # 1768 # 2697 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 1_2 - 310 ApbA PF02558.11 151 1.9e-25 78.2 0.1 1 1 4.4e-26 3.1e-25 77.5 0.1 1 150 11 153 11 154 0.88 # 1768 # 2697 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.339 2_1 - 257 RPA PF10134.4 229 1.9e-61 196.3 2.4 1 1 3.7e-62 2.6e-61 195.9 2.4 24 227 6 217 1 219 0.89 # 226 # 996 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.398 1_4 - 287 Pantoate_ligase PF02569.10 280 1.1e-79 256.1 0.0 1 1 1.9e-80 1.3e-79 255.9 0.0 12 280 9 280 3 280 0.90 # 3545 # 4405 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.353 1_5 - 286 Fibrillarin PF01269.12 229 1.4e-05 13.2 0.1 1 1 3e-06 2.1e-05 12.6 0.1 45 95 11 63 2 79 0.79 # 4407 # 5264 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.389 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9b153430-b462-4f6d-a50c-8791e742e4c8 # Target file: checkm_output/bins/pm1538/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1538/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9b153430-b462-4f6d-a50c-8791e742e4c8 checkm_output/bins/pm1538/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:45:40 2017 # [ok]