# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_18 - 388 KaiC PF06745.8 227 0.00071 11.4 0.0 1 1 1.5e-05 0.0012 10.6 0.0 14 59 147 191 137 201 0.76 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_2 - 304 HTH_IclR PF09339.5 52 1.6e-05 17.2 0.3 1 3 3.4e-06 0.00029 13.1 0.1 17 45 15 43 5 52 0.81 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 4_2 - 304 HTH_IclR PF09339.5 52 1.6e-05 17.2 0.3 2 3 0.047 4 -0.1 0.0 10 25 47 62 46 65 0.85 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 4_2 - 304 HTH_IclR PF09339.5 52 1.6e-05 17.2 0.3 3 3 0.051 4.3 -0.2 0.0 12 30 172 190 170 194 0.80 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_18 - 388 ABC_tran PF00005.22 137 0.00012 15.1 0.0 1 1 2.7e-06 0.00023 14.2 0.0 16 33 157 174 149 217 0.83 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 388 FtsK_SpoIIIE PF01580.13 205 8.4e-05 14.8 0.0 1 1 1.9e-06 0.00016 13.8 0.0 41 59 155 173 129 184 0.85 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 388 MobB PF03205.9 140 0.00043 12.7 0.0 1 1 1e-05 0.00088 11.7 0.0 4 25 156 177 154 190 0.85 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 83 HTH_8 PF02954.14 42 8.6e-06 18.0 0.1 1 1 1.8e-07 1.5e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_5 - 1017 AAA_19 PF13245.1 76 0.00044 12.7 0.0 1 1 1.6e-05 0.0014 11.1 0.0 14 31 492 508 481 518 0.90 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_18 - 388 AAA_23 PF13476.1 202 1.7e-06 21.2 0.1 1 1 4.2e-08 3.5e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_23 - 122 CPSase_L_D3 PF02787.14 123 0.00065 12.2 0.2 1 1 1.1e-05 0.00095 11.6 0.2 50 96 45 91 21 103 0.79 # 23194 # 23559 # 1 # ID=1_23;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.426 1_18 - 388 SMC_N PF02463.14 220 0.00099 11.0 0.0 1 1 2.1e-05 0.0018 10.2 0.0 26 50 154 178 147 195 0.81 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 3_7 - 696 TraG-D_C PF12696.2 128 0.00012 14.7 0.1 1 1 2.4e-06 0.0002 13.9 0.1 3 94 437 524 435 556 0.78 # 3807 # 5894 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 5_1 - 396 DDE_Tnp_1 PF01609.16 213 1.6e-28 92.4 0.0 1 1 2.6e-30 2.2e-28 91.9 0.0 3 212 83 323 81 324 0.93 # 14 # 1201 # -1 # ID=5_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 2_11 - 396 ACT PF01842.20 66 4.3e-05 15.7 0.4 1 3 0.038 3.2 0.1 0.0 13 27 203 217 203 217 0.90 # 4386 # 5573 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 2_11 - 396 ACT PF01842.20 66 4.3e-05 15.7 0.4 2 3 1.7e-05 0.0015 10.8 0.1 7 27 290 310 287 310 0.93 # 4386 # 5573 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 2_11 - 396 ACT PF01842.20 66 4.3e-05 15.7 0.4 3 3 0.076 6.5 -0.9 0.0 30 59 336 363 334 365 0.74 # 4386 # 5573 # -1 # ID=2_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.603 2_17 - 83 HTH_37 PF13744.1 80 3.7e-05 16.2 0.0 1 1 1.8e-06 7.5e-05 15.2 0.0 24 54 7 37 4 46 0.89 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 91 HTH_37 PF13744.1 80 0.00073 12.1 0.0 1 1 2.4e-05 0.001 11.6 0.0 25 53 22 50 19 54 0.92 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_22 - 325 Hydantoinase_A PF01968.13 290 3.4e-08 25.5 2.0 1 2 5e-07 4.2e-05 15.4 0.1 67 96 158 186 144 195 0.82 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_22 - 325 Hydantoinase_A PF01968.13 290 3.4e-08 25.5 2.0 2 2 3.2e-05 0.0027 9.5 0.2 212 265 248 301 191 322 0.76 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_18 - 388 AAA_16 PF13191.1 185 0.00075 12.2 0.0 1 1 1.8e-05 0.0015 11.2 0.0 26 50 154 178 140 211 0.85 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 388 AAA_22 PF13401.1 131 2.5e-06 20.4 0.0 1 1 1.4e-07 6.1e-06 19.1 0.0 4 30 152 178 149 243 0.84 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_5 - 1017 AAA_22 PF13401.1 131 0.00018 14.4 0.0 1 1 1.3e-05 0.00057 12.7 0.0 8 73 492 561 486 594 0.70 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_37 - 287 Methyltransf_27 PF13708.1 194 1.1e-68 223.2 0.0 1 1 2.3e-70 1.9e-68 222.5 0.0 2 194 89 282 88 282 0.97 # 29200 # 30060 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 1_18 - 388 AAA_29 PF13555.1 62 7.5e-06 18.1 0.1 1 1 2.2e-07 1.9e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 4_2 - 304 HTH_1 PF00126.22 60 1.8e-19 62.0 0.7 1 1 3.7e-21 3.2e-19 61.2 0.7 2 59 5 62 4 63 0.96 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 2_17 - 83 HTH_3 PF01381.17 55 1.6e-09 30.2 0.1 1 1 9.3e-11 2.6e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 91 HTH_3 PF01381.17 55 5.3e-05 15.7 0.0 1 1 2.7e-06 7.7e-05 15.2 0.0 2 32 21 51 21 55 0.90 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_26 - 160 HTH_3 PF01381.17 55 0.00013 14.6 0.1 1 2 0.0022 0.062 5.9 0.0 2 20 15 33 14 37 0.91 # 13826 # 14305 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 2_26 - 160 HTH_3 PF01381.17 55 0.00013 14.6 0.1 2 2 0.0016 0.047 6.3 0.0 1 23 96 118 96 120 0.89 # 13826 # 14305 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 2_10 - 91 HTH_23 PF13384.1 50 6.9e-06 18.4 0.1 1 1 2.7e-07 1.1e-05 17.7 0.1 12 38 23 49 19 54 0.85 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_17 - 83 HTH_23 PF13384.1 50 3.8e-05 16.0 0.0 1 1 1.7e-06 7.4e-05 15.1 0.0 15 34 10 31 6 40 0.81 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_17 - 83 HTH_19 PF12844.2 64 3.4e-08 26.2 0.0 1 1 1.2e-09 4.9e-08 25.7 0.0 8 45 10 47 8 56 0.86 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 91 HTH_19 PF12844.2 64 7.4e-06 18.7 0.0 1 1 2.3e-07 9.6e-06 18.3 0.0 5 35 21 51 21 66 0.92 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 3_7 - 696 TrwB_AAD_bind PF10412.4 386 1.6e-06 19.6 0.9 1 3 1.7e-05 0.0015 9.8 0.0 16 36 134 154 125 158 0.88 # 3807 # 5894 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 3_7 - 696 TrwB_AAD_bind PF10412.4 386 1.6e-06 19.6 0.9 2 3 9.3e-05 0.0079 7.4 0.1 93 140 235 281 229 303 0.80 # 3807 # 5894 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 3_7 - 696 TrwB_AAD_bind PF10412.4 386 1.6e-06 19.6 0.9 3 3 0.083 7 -2.3 0.0 293 323 482 512 405 546 0.58 # 3807 # 5894 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_5 - 1017 AAA_18 PF13238.1 129 7.2e-05 15.8 1.3 1 1 3.5e-06 0.0003 13.8 0.0 2 19 492 509 492 571 0.76 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_6 - 435 IMS_HHH PF11798.3 32 0.00042 13.1 0.0 1 1 1.5e-05 0.0012 11.6 0.0 12 32 192 212 182 212 0.83 # 1513 # 2817 # 1 # ID=2_6;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.591 1_18 - 388 DUF87 PF01935.12 229 7.8e-05 15.2 0.0 1 1 1.8e-06 0.00015 14.2 0.0 28 45 157 174 155 188 0.89 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 83 HTH_28 PF13518.1 52 0.00036 13.3 0.1 1 1 9.1e-06 0.00077 12.2 0.1 8 29 8 31 6 35 0.78 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 1_18 - 388 Miro PF08477.8 119 0.00081 12.6 0.0 1 1 2.1e-05 0.0018 11.5 0.0 4 28 157 186 156 220 0.72 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_17 - 83 HTH_31 PF13560.1 64 1.6e-09 30.6 0.9 1 1 7.4e-11 2.1e-09 30.2 0.9 9 56 9 55 6 72 0.90 # 8661 # 8909 # 1 # ID=2_17;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.570 2_10 - 91 HTH_31 PF13560.1 64 2.4e-07 23.6 0.4 1 1 1.4e-08 3.9e-07 22.9 0.3 7 36 21 50 17 65 0.89 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 2_26 - 160 HTH_31 PF13560.1 64 5.7e-07 22.4 1.2 1 2 0.0035 0.099 5.6 0.0 6 33 14 41 12 48 0.88 # 13826 # 14305 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 2_26 - 160 HTH_31 PF13560.1 64 5.7e-07 22.4 1.2 2 2 2.8e-06 7.8e-05 15.6 0.3 4 39 94 129 91 135 0.88 # 13826 # 14305 # 1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_5 - 1017 DUF2075 PF09848.4 352 0.0003 12.5 0.0 1 1 1.1e-05 0.00094 10.8 0.0 5 22 492 509 489 537 0.87 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_18 - 388 T2SE PF00437.15 272 2.4e-23 75.0 0.0 1 1 4.6e-25 3.9e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_22 - 325 StbA PF06406.6 318 6.1e-157 514.1 0.2 1 1 8.1e-159 6.9e-157 513.9 0.2 1 318 1 322 1 322 0.99 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_18 - 388 NACHT PF05729.7 166 0.00029 13.2 0.0 1 1 6.6e-06 0.00056 12.3 0.0 4 29 156 181 154 188 0.83 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_5 - 1017 AAA_17 PF13207.1 121 5.2e-05 16.8 0.0 1 1 4.3e-06 0.00036 14.0 0.0 3 27 492 522 492 581 0.72 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_18 - 388 AAA_25 PF13481.1 194 4.9e-06 18.7 0.0 1 1 1.3e-07 1.1e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_30 - 147 RepA_N PF06970.6 76 0.00068 12.1 0.0 1 1 1.6e-05 0.0014 11.2 0.0 15 44 56 85 53 90 0.92 # 26307 # 26747 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.549 2_22 - 325 Hydant_A_N PF05378.8 176 0.00056 12.1 3.4 1 4 0.069 5.9 -1.0 0.0 1 19 2 20 2 52 0.83 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_22 - 325 Hydant_A_N PF05378.8 176 0.00056 12.1 3.4 2 4 0.057 4.9 -0.7 0.0 108 154 38 86 17 98 0.66 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_22 - 325 Hydant_A_N PF05378.8 176 0.00056 12.1 3.4 3 4 0.057 4.8 -0.7 0.0 95 129 113 147 89 153 0.76 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 2_22 - 325 Hydant_A_N PF05378.8 176 0.00056 12.1 3.4 4 4 3.6e-05 0.0031 9.7 0.2 2 51 170 217 169 226 0.82 # 11216 # 12190 # 1 # ID=2_22;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.552 1_18 - 388 Ribosomal_S5 PF00333.15 67 2.6e-05 16.7 0.1 1 2 0.00091 0.077 5.5 0.0 26 45 84 103 76 114 0.83 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 388 Ribosomal_S5 PF00333.15 67 2.6e-05 16.7 0.1 2 2 0.00012 0.0099 8.4 0.0 21 54 242 274 230 278 0.91 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_18 - 388 RNA_helicase PF00910.17 107 0.00095 12.1 0.0 1 1 2.5e-05 0.0021 10.9 0.0 3 26 157 180 156 197 0.81 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 2_10 - 91 Mor PF08765.6 108 0.00063 12.2 0.0 1 1 9.2e-06 0.00078 11.9 0.0 71 93 27 49 18 57 0.85 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 1_18 - 388 ATP_bind_1 PF03029.12 238 0.00069 11.8 0.0 1 1 1.3e-05 0.0011 11.2 0.0 1 25 157 181 157 191 0.84 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_14 - 66 DDE_Tnp_IS240 PF13610.1 140 0.00022 13.9 0.0 1 1 2.8e-06 0.00024 13.8 0.0 29 64 18 52 5 58 0.83 # 13604 # 13801 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.460 2_10 - 91 HTH_26 PF13443.1 63 9.6e-05 15.3 0.0 1 1 1.6e-06 0.00014 14.8 0.0 4 34 22 52 21 56 0.91 # 4095 # 4367 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.663 4_2 - 304 MarR_2 PF12802.2 62 0.00011 14.6 0.1 1 1 8e-06 0.00068 12.0 0.1 25 48 20 43 8 52 0.89 # 451 # 1362 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_5 - 1017 AAA_10 PF12846.2 304 7.1e-41 133.2 0.1 1 1 5.5e-42 1.5e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 4642 # 7692 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 3_7 - 696 AAA_10 PF12846.2 304 5.3e-10 31.8 0.0 1 1 2.8e-11 8e-10 31.2 0.0 2 292 134 503 133 514 0.76 # 3807 # 5894 # 1 # ID=3_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_18 - 388 AAA_10 PF12846.2 304 1.2e-06 20.8 0.0 1 1 2.5e-07 7e-06 18.3 0.0 3 27 154 178 152 196 0.74 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 1_27 - 145 SSB PF00436.20 104 6.3e-31 99.1 0.3 1 1 8.5e-33 7.3e-31 98.9 0.3 2 103 7 111 6 112 0.96 # 25097 # 25531 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_18 - 388 GTP_EFTU PF00009.22 188 0.00091 11.4 0.0 1 1 2e-05 0.0017 10.5 0.0 8 34 157 183 155 195 0.87 # 18172 # 19335 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.523 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/72485965-6796-47a1-9cb9-f70d0ede78cd # Target file: checkm_output/bins/pm1527/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1527/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/72485965-6796-47a1-9cb9-f70d0ede78cd checkm_output/bins/pm1527/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:45:24 2017 # [ok]