# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 183 Peptidase_M66 PF10462.4 305 2.8e-07 19.7 0.4 1 1 2.6e-08 3.6e-07 19.4 0.4 167 222 69 128 59 135 0.65 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Peptidase_M10 PF00413.19 154 7.6e-06 15.9 0.5 1 1 6.9e-07 9.6e-06 15.5 0.5 106 127 103 124 1 134 0.87 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_11 - 92 Glyco_trans_4_2 PF13477.1 139 7.8e-05 12.7 0.0 1 1 5.5e-06 7.8e-05 12.7 0.0 76 102 46 72 2 88 0.79 # 7461 # 7736 # 1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.496 1_1 - 183 Reprolysin_5 PF13688.1 196 4.7e-09 26.5 0.2 1 1 7.2e-10 1e-08 25.5 0.2 25 172 6 133 2 153 0.68 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Peptidase_M43 PF05572.8 154 3e-05 13.8 0.0 1 1 2.8e-06 4e-05 13.4 0.0 50 89 83 122 36 148 0.79 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_12 - 174 RepL PF05732.6 165 3.9e-09 26.0 0.9 1 1 3.8e-10 5.4e-09 25.6 0.9 13 132 34 164 21 170 0.76 # 7854 # 8375 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 1_1 - 183 Reprolysin_4 PF13583.1 206 4.4e-10 29.5 0.4 1 1 5.4e-11 7.5e-10 28.7 0.4 27 175 6 136 2 152 0.79 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Reprolysin PF01421.14 199 2.8e-06 17.2 1.0 1 1 5.8e-07 8.2e-06 15.6 1.0 128 151 99 122 2 145 0.71 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_9 - 134 DUF2250 PF10007.4 93 7.1e-05 12.9 0.1 1 1 7.6e-06 0.00011 12.3 0.1 28 77 6 58 3 64 0.84 # 6849 # 7250 # -1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.410 1_1 - 183 Reprolysin_2 PF13574.1 174 2.2e-09 27.7 0.1 1 1 2.3e-10 3.3e-09 27.2 0.1 5 156 7 143 3 153 0.79 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Peptidase_M11 PF05548.6 314 1.2e-06 17.8 0.9 1 1 1.1e-07 1.6e-06 17.3 0.9 130 184 82 140 76 151 0.74 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Reprolysin_3 PF13582.1 124 1.8e-19 60.7 0.0 1 1 2.3e-20 3.2e-19 59.8 0.0 3 123 9 118 7 119 0.87 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 1_1 - 183 Astacin PF01400.19 191 6.3e-06 15.8 0.1 1 1 5.8e-07 8.1e-06 15.4 0.1 46 96 69 119 34 134 0.75 # 2 # 550 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.461 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/1aeaf21d-eb6e-49e1-b10b-90ee0ab197a7 # Target file: checkm_output/bins/pm1514/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1514/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/1aeaf21d-eb6e-49e1-b10b-90ee0ab197a7 checkm_output/bins/pm1514/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:44:57 2017 # [ok]