# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 520 HMGL-like PF00682.14 237 3.6e-93 300.8 0.4 1 1 6.4e-94 5.1e-93 300.3 0.4 1 236 13 251 13 252 0.99 # 3218 # 4777 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_4 - 520 Trp_syntA PF00290.15 259 2.1e-05 12.4 0.0 1 1 5.5e-06 4.4e-05 11.4 0.0 23 50 25 52 20 64 0.90 # 3218 # 4777 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.288 1_5 - 251 HTH_36 PF13730.1 55 4.9e-05 12.9 1.5 1 2 0.00018 0.0015 8.1 0.1 9 39 79 109 74 128 0.66 # 4912 # 5664 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.252 1_5 - 251 HTH_36 PF13730.1 55 4.9e-05 12.9 1.5 2 2 0.0074 0.059 3.0 0.1 23 50 188 216 179 230 0.81 # 4912 # 5664 # -1 # ID=1_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.252 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/574fe88b-49c7-4f30-963c-700b1048249f # Target file: checkm_output/bins/pm1459/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1459/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/574fe88b-49c7-4f30-963c-700b1048249f checkm_output/bins/pm1459/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:43:40 2017 # [ok]