# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 520 HMGL-like PF00682.14 237 3.2e-93 300.8 0.4 1 1 6.4e-94 4.5e-93 300.3 0.4 1 236 13 251 13 252 0.99 # 3001 # 4560 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.287 1_4 - 520 Trp_syntA PF00290.15 259 1.9e-05 12.4 0.0 1 1 5.5e-06 3.9e-05 11.4 0.0 23 50 25 52 20 64 0.90 # 3001 # 4560 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.287 1_3 - 251 HTH_36 PF13730.1 55 4.3e-05 12.9 1.5 1 2 0.00018 0.0013 8.1 0.1 9 39 79 109 74 128 0.66 # 2114 # 2866 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.252 1_3 - 251 HTH_36 PF13730.1 55 4.3e-05 12.9 1.5 2 2 0.0074 0.052 3.0 0.1 23 50 188 216 179 230 0.81 # 2114 # 2866 # 1 # ID=1_3;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.252 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/7e58af98-d9c8-4ba7-a1ec-ad67ab638110 # Target file: checkm_output/bins/pm1458/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1458/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/7e58af98-d9c8-4ba7-a1ec-ad67ab638110 checkm_output/bins/pm1458/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:43:40 2017 # [ok]