# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_1 - 180 AAA_19 PF13245.1 76 3.3e-05 13.6 0.0 1 1 4.3e-06 5.2e-05 13.0 0.0 14 45 5 32 2 67 0.78 # 3 # 542 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.387 1_1 - 180 DUF2075 PF09848.4 352 8e-05 11.6 0.2 1 1 1.5e-05 0.00019 10.4 0.2 2 25 2 25 1 152 0.74 # 3 # 542 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.387 1_1 - 180 Zot PF05707.7 193 9.7e-43 135.7 0.0 1 1 9.3e-44 1.1e-42 135.5 0.0 1 153 2 154 2 179 0.86 # 3 # 542 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.387 1_1 - 180 AAA_10 PF12846.2 304 1.3e-06 17.9 0.3 1 2 2.8e-05 0.00033 10.0 0.2 4 32 4 32 2 60 0.92 # 3 # 542 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.387 1_1 - 180 AAA_10 PF12846.2 304 1.3e-06 17.9 0.3 2 2 0.00035 0.0042 6.4 0.0 220 268 79 131 65 161 0.82 # 3 # 542 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGGA/GGAG/GAGG;rbs_spacer=11-12bp;gc_cont=0.387 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/0d3f5f91-e518-4148-b1e7-410bfc07e826 # Target file: checkm_output/bins/pm1399/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1399/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/0d3f5f91-e518-4148-b1e7-410bfc07e826 checkm_output/bins/pm1399/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:42:07 2017 # [ok]