# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 425 2-Hacid_dh_C PF02826.14 178 2.1e-07 19.7 0.1 1 1 4.8e-08 4.4e-07 18.7 0.1 27 86 209 266 193 274 0.84 # 6742 # 8016 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 1_4 - 425 NAD_binding_7 PF13241.1 103 8.6e-05 12.4 0.0 1 1 2e-05 0.00018 11.3 0.0 3 40 214 251 213 318 0.78 # 6742 # 8016 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 1_4 - 425 ELFV_dehydrog PF00208.16 244 8.8e-74 237.6 0.0 1 1 1.3e-74 1.1e-73 237.2 0.0 1 244 188 420 188 420 0.98 # 6742 # 8016 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 1_3 - 346 Rep_3 PF01051.16 222 2.9e-31 98.2 2.2 1 1 4.2e-32 3.8e-31 97.8 2.2 3 222 26 288 24 288 0.90 # 5048 # 6085 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.315 1_5 - 403 TIGR00508 TIGR00508 419 5.1e-76 245.0 0.0 1 1 1.2e-76 1e-75 243.9 0.0 18 411 26 389 16 396 0.92 # 8420 # 9628 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.344 1_4 - 425 AdoHcyase_NAD PF00670.16 162 5.2e-05 12.6 0.0 1 1 1.7e-05 0.00015 11.1 0.0 16 92 211 285 203 303 0.81 # 6742 # 8016 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 1_3 - 346 HTH_36 PF13730.1 55 3.7e-06 16.6 0.0 1 1 2.4e-06 2.2e-05 14.1 0.0 6 55 220 273 218 273 0.80 # 5048 # 6085 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.315 1_4 - 425 AlaDh_PNT_C PF01262.16 168 0.00011 11.3 1.9 1 1 2.2e-05 0.0002 10.5 0.3 17 52 215 250 202 260 0.85 # 6742 # 8016 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.387 1_3 - 346 HTH_11 PF08279.7 55 3.5e-06 16.2 2.2 1 2 1.8e-06 1.6e-05 14.1 0.3 12 54 234 282 224 283 0.79 # 5048 # 6085 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.315 1_3 - 346 HTH_11 PF08279.7 55 3.5e-06 16.2 2.2 2 2 0.059 0.53 -0.4 0.1 33 44 322 333 321 340 0.83 # 5048 # 6085 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.315 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/3cc22284-d8a4-48b8-bafa-536caa673503 # Target file: checkm_output/bins/pm1339/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1339/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/3cc22284-d8a4-48b8-bafa-536caa673503 checkm_output/bins/pm1339/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:40:39 2017 # [ok]