# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 101 zf-ribbon_3 PF13248.1 26 1.1e-09 24.8 2.7 1 1 1.1e-09 2.2e-09 23.8 2.7 2 25 4 27 3 28 0.93 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_2 - 101 OrfB_Zn_ribbon PF07282.6 69 0.00034 7.8 5.6 1 2 0.012 0.025 1.8 0.2 46 57 4 15 2 16 0.77 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_2 - 101 OrfB_Zn_ribbon PF07282.6 69 0.00034 7.8 5.6 2 2 8.4e-05 0.00017 8.7 1.1 26 40 16 30 13 40 0.78 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_2 - 101 DZR PF12773.2 50 6.5e-09 23.0 1.1 1 1 5.9e-09 1.2e-08 22.2 1.1 1 22 7 28 3 40 0.78 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_2 - 101 zinc_ribbon_2 PF13240.1 23 1.5e-08 21.5 5.7 1 1 1.2e-08 2.5e-08 20.8 5.7 1 21 6 26 6 28 0.94 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 1_2 - 101 UPF0547 PF10571.4 26 4.8e-08 20.1 4.1 1 1 4.3e-08 8.5e-08 19.3 4.1 3 21 7 25 6 26 0.94 # 1319 # 1621 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.419 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/62c8c147-f966-4c8e-aba4-3863ff83a37a # Target file: checkm_output/bins/pm1322/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1322/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/62c8c147-f966-4c8e-aba4-3863ff83a37a checkm_output/bins/pm1322/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:40:13 2017 # [ok]