# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 108 Sigma70_r4 PF04545.11 50 1e-06 16.5 0.0 1 2 0.085 0.34 -1.2 0.0 35 43 70 78 69 79 0.84 # 3139 # 3462 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 1_3 - 108 Sigma70_r4 PF04545.11 50 1e-06 16.5 0.0 2 2 1e-06 4.1e-06 14.5 0.0 24 42 88 106 87 107 0.91 # 3139 # 3462 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.386 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/93bbe8e9-9541-4804-b44b-b83b7be80995 # Target file: checkm_output/bins/pm1320/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1320/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/93bbe8e9-9541-4804-b44b-b83b7be80995 checkm_output/bins/pm1320/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:40:08 2017 # [ok]