# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 319 ABC_tran PF00005.22 137 9.3e-06 15.3 0.0 1 1 3.5e-06 2.8e-05 13.8 0.0 12 37 235 260 223 287 0.83 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_19 PF13245.1 76 7.3e-07 18.3 0.0 1 1 3.2e-07 2.6e-06 16.6 0.0 5 35 228 258 224 291 0.75 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_23 PF13476.1 202 7.6e-07 18.9 0.1 1 2 0.069 0.55 -0.2 0.0 74 138 28 97 5 133 0.52 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_23 PF13476.1 202 7.6e-07 18.9 0.1 2 2 4.6e-07 3.7e-06 16.7 0.0 19 36 234 251 217 282 0.87 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 Zeta_toxin PF06414.7 201 3e-05 12.5 0.0 1 1 6.4e-06 5.1e-05 11.7 0.0 18 40 236 258 222 271 0.84 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_30 PF13604.1 196 2.1e-08 23.2 0.0 1 1 4.1e-09 3.3e-08 22.6 0.0 3 43 219 259 217 298 0.91 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_16 PF13191.1 185 5.7e-07 19.0 0.0 1 1 1.6e-07 1.3e-06 17.9 0.0 8 48 222 258 221 275 0.84 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_22 PF13401.1 131 1.4e-06 17.9 0.0 1 1 3.4e-07 2.7e-06 16.9 0.0 4 27 234 257 230 278 0.88 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_29 PF13555.1 62 1.3e-06 17.3 0.0 1 1 3.2e-07 2.6e-06 16.4 0.0 19 40 231 251 221 257 0.82 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 Rad17 PF03215.10 519 3.7e-05 11.8 0.0 1 1 7.4e-06 5.9e-05 11.1 0.0 42 69 231 258 220 276 0.78 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 Arch_ATPase PF01637.13 234 5.6e-06 15.5 0.0 1 1 1.2e-06 9.9e-06 14.7 0.0 8 43 223 257 221 283 0.90 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_18 PF13238.1 129 1.8e-06 17.6 0.0 1 1 1e-06 8e-06 15.6 0.0 1 28 237 268 237 277 0.83 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 DUF258 PF03193.11 161 6.5e-05 11.5 0.0 1 1 1.3e-05 0.00011 10.8 0.0 23 54 220 253 208 269 0.85 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_4 - 91 T2SE PF00437.15 272 1.4e-20 62.6 0.6 1 1 3.8e-21 1.5e-20 62.5 0.6 195 271 1 75 1 76 0.94 # 2531 # 2803 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.480 1_3 - 319 T2SE PF00437.15 272 1.5e-14 42.8 0.0 1 1 5.6e-15 2.3e-14 42.2 0.0 66 150 166 256 145 262 0.89 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_17 PF13207.1 121 6e-07 19.7 0.0 1 1 1.6e-07 1.3e-06 18.7 0.0 1 32 236 269 236 304 0.76 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_14 PF13173.1 128 9.5e-06 14.9 0.0 1 1 2.4e-06 1.9e-05 13.9 0.0 3 39 235 268 233 296 0.74 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_3 - 319 AAA_10 PF12846.2 304 4.9e-05 12.1 0.1 1 1 1e-05 8.3e-05 11.4 0.1 4 26 237 259 234 264 0.85 # 1602 # 2558 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9404f29c-c0e2-4de1-9eb1-22970e58011a # Target file: checkm_output/bins/pm130/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm130/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9404f29c-c0e2-4de1-9eb1-22970e58011a checkm_output/bins/pm130/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:39:38 2017 # [ok]