# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 498 zf-ribbon_3 PF13248.1 26 0.068 1.6 12.7 1 2 0.0015 0.0091 4.3 6.0 4 25 75 101 72 102 0.61 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zf-ribbon_3 PF13248.1 26 0.068 1.6 12.7 2 2 0.087 0.52 -1.3 0.5 4 9 442 447 441 450 0.74 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zf-NADH-PPase PF09297.6 32 0.0098 4.5 15.6 1 3 0.026 0.15 0.7 0.5 23 31 75 83 69 84 0.90 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zf-NADH-PPase PF09297.6 32 0.0098 4.5 15.6 2 3 0.00034 0.0021 6.6 0.9 4 12 93 101 90 107 0.83 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zf-NADH-PPase PF09297.6 32 0.0098 4.5 15.6 3 3 0.00092 0.0055 5.3 1.7 6 17 443 454 443 456 0.89 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 A2L_zn_ribbon PF08792.5 33 0.00049 8.6 3.6 1 2 0.004 0.024 3.2 0.5 5 29 75 100 73 101 0.85 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 A2L_zn_ribbon PF08792.5 33 0.00049 8.6 3.6 2 2 0.00068 0.0041 5.7 0.1 2 13 439 450 439 453 0.85 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 Ribosomal_S27e PF01667.12 55 3.1e-05 12.5 1.1 1 1 1.4e-05 8.5e-05 11.1 1.1 5 33 71 99 68 104 0.90 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zinc_ribbon_4 PF13717.1 36 0.0014 7.4 5.2 1 2 0.00049 0.003 6.3 0.1 2 14 73 85 73 87 0.84 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zinc_ribbon_4 PF13717.1 36 0.0014 7.4 5.2 2 2 0.0064 0.038 2.8 0.0 5 14 95 104 94 111 0.81 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zinc_ribbon_5 PF13719.1 37 0.00013 10.6 2.7 1 2 0.00031 0.0019 6.8 0.0 2 14 73 85 72 87 0.83 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 zinc_ribbon_5 PF13719.1 37 0.00013 10.6 2.7 2 2 0.0048 0.029 3.0 0.0 5 14 95 104 94 113 0.81 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 Zn-ribbon_8 PF09723.5 42 0.0023 7.0 9.5 1 2 0.00051 0.0031 6.5 5.2 7 35 75 101 75 105 0.89 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_5 - 498 Zn-ribbon_8 PF09723.5 42 0.0023 7.0 9.5 2 2 0.016 0.098 1.7 0.1 25 37 439 450 430 459 0.71 # 4003 # 5496 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_6 - 125 TIGR01455 TIGR01455 442 1.4e-27 85.0 0.0 1 1 3.1e-28 1.8e-27 84.6 0.0 9 77 38 105 35 107 0.94 # 5672 # 6046 # -1 # ID=1_6;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.565 1_1 - 269 Pterin_bind PF00809.17 210 3.5e-59 188.5 0.0 1 1 7.1e-60 4.2e-59 188.3 0.0 1 209 10 216 10 217 0.98 # 3 # 809 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.613 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/20c7a9ce-7fab-4ca6-883f-5f8d2e965514 # Target file: checkm_output/bins/pm1256/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1256/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/20c7a9ce-7fab-4ca6-883f-5f8d2e965514 checkm_output/bins/pm1256/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:38:33 2017 # [ok]