# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_3 - 226 TetR_N PF00440.18 47 2.1e-21 64.4 0.1 1 2 6.9e-21 4.1e-20 60.2 0.0 2 47 19 64 18 64 0.97 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_3 - 226 TetR_N PF00440.18 47 2.1e-21 64.4 0.1 2 2 0.013 0.075 1.8 0.1 1 16 179 194 179 196 0.91 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_1 - 365 DDE_Tnp_1 PF01609.16 213 4.8e-33 103.4 0.0 1 1 1e-33 6.2e-33 103.0 0.0 2 213 107 348 106 348 0.96 # 3 # 1097 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 1_4 - 425 TIGR01394 TIGR01394 594 9.8e-05 9.2 0.0 1 1 2.4e-05 0.00015 8.6 0.0 408 486 292 368 286 379 0.84 # 2708 # 3982 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.632 1_3 - 226 HTH_23 PF13384.1 50 5.4e-05 11.9 0.2 1 2 4.8e-05 0.00029 9.5 0.0 10 35 22 51 14 64 0.75 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_3 - 226 HTH_23 PF13384.1 50 5.4e-05 11.9 0.2 2 2 0.083 0.5 -0.7 0.1 9 20 97 108 96 110 0.84 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_3 - 226 HTH_Tnp_1_2 PF13022.1 142 4.7e-05 12.1 0.0 1 1 1.2e-05 7e-05 11.6 0.0 22 77 24 73 5 79 0.76 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_3 - 226 HTH_20 PF12840.2 61 1.4e-05 13.8 0.1 1 1 1.8e-05 0.00011 11.0 0.0 21 46 30 55 18 63 0.85 # 2027 # 2704 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ae385f71-2f58-4a0a-b0ba-148e98ed4815 # Target file: checkm_output/bins/pm1244/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1244/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ae385f71-2f58-4a0a-b0ba-148e98ed4815 checkm_output/bins/pm1244/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:38:20 2017 # [ok]