#                                                                            --- full sequence --- -------------- this domain -------------   hmm coord   ali coord   env coord
# target name        accession   tlen query name           accession   qlen   E-value  score  bias   #  of  c-Evalue  i-Evalue  score  bias  from    to  from    to  from    to  acc description of target
#------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- ---------------------
1_4                  -            160 Sigma70_r4_2         PF08281.7     54   1.7e-05   13.7   0.0   1   1   7.9e-06   6.3e-05   11.8   0.0    27    46     7    26     6    26 0.94 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 Fe_dep_repress       PF01325.14    60   2.5e-06   16.8   0.0   1   1   7.1e-07   5.6e-06   15.7   0.0    22    55     6    39     2    44 0.86 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 Rrf2                 PF02082.15    83     2e-05   14.1   0.0   1   1   9.8e-06   7.8e-05   12.2   0.0    25    54     6    35     2    51 0.92 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 MerR_1               PF13411.1     69   2.4e-11   32.7   0.0   1   1   5.2e-12   4.2e-11   31.9   0.0     2    66     8    76     7    79 0.91 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 GntR                 PF00392.16    64   6.4e-05   11.8   0.0   1   1   1.7e-05   0.00014   10.7   0.0    21    63     4    45     1    46 0.89 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 HTH_24               PF13412.1     48   9.8e-06   14.4   0.0   1   1   2.8e-06   2.3e-05   13.2   0.0    18    46     7    35     6    35 0.96 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_6                  -            226 IGPD                 PF00475.13   145   1.1e-05   14.7   0.0   1   1   4.3e-06   3.5e-05   13.1   0.0    37    66   195   224   193   225 0.92 # 4635 # 5312 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.395
1_4                  -            160 MerR                 PF00376.18    38   3.8e-05   12.6   0.0   1   1   1.3e-05    0.0001   11.2   0.0     2    19     9    26     8    29 0.91 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
1_4                  -            160 HTH_17               PF12728.2     51   1.2e-05   14.9   0.0   1   1   4.2e-06   3.4e-05   13.5   0.0     2    44     7    53     7    55 0.69 # 2138 # 2617 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.408
#
# Program:         hmmsearch
# Version:         3.1b1 (May 2013)
# Pipeline mode:   SEARCH
# Query file:      /tmp/a1851465-24b1-4eb5-a0f9-33ac6e05190b
# Target file:     checkm_output/bins/pm1229/genes.faa
# Option settings: hmmsearch --domtblout checkm_output/bins/pm1229/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a1851465-24b1-4eb5-a0f9-33ac6e05190b checkm_output/bins/pm1229/genes.faa 
# Current dir:     /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887
# Date:            Thu Nov 30 09:38:00 2017
# [ok]