# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_28 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.5 0.0 1 2 0.00041 0.039 6.1 0.0 112 146 18 54 8 81 0.66 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 Cons_hypoth95 PF03602.10 183 1.3e-05 17.5 0.0 2 2 4e-05 0.0038 9.4 0.0 41 62 162 183 145 218 0.78 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_16 - 562 K_oxygenase PF13434.1 341 3.5e-06 18.9 0.4 1 3 0.0064 0.61 1.7 0.3 189 223 97 129 86 132 0.76 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 K_oxygenase PF13434.1 341 3.5e-06 18.9 0.4 2 3 1.9e-06 0.00018 13.3 0.0 130 233 217 311 200 342 0.78 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 K_oxygenase PF13434.1 341 3.5e-06 18.9 0.4 3 3 0.019 1.8 0.1 0.0 129 160 333 366 313 378 0.68 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 4_2 - 186 HTH_IclR PF09339.5 52 1.2e-05 17.7 0.2 1 1 4.6e-07 4.3e-05 15.9 0.0 15 40 155 180 151 181 0.85 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 3_2 - 522 ABC_tran PF00005.22 137 0.00015 14.9 0.0 1 1 4.7e-06 0.00045 13.4 0.0 14 113 27 155 17 158 0.73 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_2 - 187 HTH_22 PF13309.1 64 5.4e-06 19.0 0.3 1 2 0.067 2.1 1.1 0.0 23 38 70 85 58 87 0.81 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 6_2 - 187 HTH_22 PF13309.1 64 5.4e-06 19.0 0.3 2 2 4e-06 0.00013 14.6 0.0 47 64 166 183 164 183 0.93 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_22 PF13309.1 64 0.00027 13.6 1.5 1 1 3.5e-05 0.0011 11.6 0.1 35 63 156 179 143 180 0.76 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_7 - 119 HTH_22 PF13309.1 64 0.00061 12.4 0.0 1 1 6.1e-05 0.0019 10.8 0.0 28 64 8 39 1 39 0.80 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_28 - 228 TIGR00095 TIGR00095 194 0.00031 13.0 0.0 1 2 0.0016 0.15 4.2 0.0 124 138 20 34 9 79 0.75 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 TIGR00095 TIGR00095 194 0.00031 13.0 0.0 2 2 0.00024 0.023 6.8 0.0 53 86 164 199 155 218 0.77 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_18 - 188 N6_Mtase PF02384.11 311 0.00015 13.8 0.0 1 2 1.6e-05 0.0016 10.4 0.0 28 64 32 68 21 83 0.87 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_18 - 188 N6_Mtase PF02384.11 311 0.00015 13.8 0.0 2 2 0.018 1.7 0.4 0.0 127 137 114 124 103 134 0.82 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_11 - 1588 Sigma54_activat PF00158.21 168 9.2e-06 18.0 0.0 1 1 2.1e-07 2e-05 16.9 0.0 11 83 215 286 209 307 0.81 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 5_7 - 119 HTH_DeoR PF08220.7 57 0.00047 12.6 0.0 1 1 7.8e-06 0.00074 11.9 0.0 5 36 9 39 7 50 0.80 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_2 - 186 HTH_40 PF14493.1 91 0.00063 12.8 0.6 1 1 2.1e-05 0.002 11.2 0.1 7 32 152 177 147 183 0.89 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_7 - 119 HTH_38 PF13936.1 44 2.4e-08 26.3 0.1 1 1 1.2e-09 5.9e-08 25.1 0.1 5 42 2 39 2 39 0.94 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_2 - 186 HTH_38 PF13936.1 44 2.9e-06 19.6 1.4 1 1 1.2e-07 5.6e-06 18.7 0.0 9 41 147 179 145 182 0.93 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_16 - 562 FAD_oxidored PF12831.2 428 2.2e-06 19.7 4.0 1 2 2.3e-08 2.2e-06 19.7 4.0 2 41 101 139 100 159 0.83 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 FAD_oxidored PF12831.2 428 2.2e-06 19.7 4.0 2 2 0.021 2 0.2 0.0 85 119 306 339 260 364 0.71 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 3_1 - 341 UvrD-helicase PF00580.16 315 9.4e-09 27.7 0.1 1 2 5.9e-06 0.00056 12.0 0.1 16 69 4 49 2 78 0.83 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 341 UvrD-helicase PF00580.16 315 9.4e-09 27.7 0.1 2 2 2.6e-06 0.00025 13.2 0.0 242 294 115 170 96 174 0.86 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_16 - 562 Pyr_redox_3 PF13738.1 203 6.1e-19 61.7 0.1 1 3 3.1e-06 0.00029 13.7 0.1 167 199 98 130 70 144 0.84 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 Pyr_redox_3 PF13738.1 203 6.1e-19 61.7 0.1 2 3 6.4e-09 6.1e-07 22.5 0.0 115 201 219 304 172 306 0.78 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 Pyr_redox_3 PF13738.1 203 6.1e-19 61.7 0.1 3 3 1e-08 9.9e-07 21.8 0.0 88 155 316 378 308 431 0.85 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 NAD_binding_7 PF13241.1 103 8.1e-06 18.9 2.1 1 2 6.2e-05 0.0059 9.7 0.1 9 38 100 129 97 164 0.90 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 NAD_binding_7 PF13241.1 103 8.1e-06 18.9 2.1 2 2 0.00024 0.023 7.8 0.1 8 41 271 307 264 384 0.68 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 6_2 - 187 HTH_8 PF02954.14 42 9.8e-05 14.7 0.2 1 2 0.023 2.2 0.8 0.1 2 12 114 124 113 124 0.85 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 6_2 - 187 HTH_8 PF02954.14 42 9.8e-05 14.7 0.2 2 2 1.6e-05 0.0015 10.9 0.0 20 37 163 180 159 183 0.86 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_10 - 226 TetR_N PF00440.18 47 3.4e-20 64.4 0.1 1 2 6.9e-21 6.5e-19 60.2 0.0 2 47 19 64 18 64 0.97 # 6288 # 6965 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 2_10 - 226 TetR_N PF00440.18 47 3.4e-20 64.4 0.1 2 2 0.013 1.2 1.8 0.1 1 16 179 194 179 196 0.91 # 6288 # 6965 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_32 - 389 CbiA PF01656.18 195 9.5e-37 119.1 0.0 1 1 1.3e-38 1.3e-36 118.7 0.0 2 194 110 339 109 340 0.80 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_28 - 228 MethyltransfD12 PF02086.10 260 0.00036 12.8 0.0 1 2 0.014 1.3 1.2 0.0 173 188 16 31 10 92 0.81 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 MethyltransfD12 PF02086.10 260 0.00036 12.8 0.0 2 2 4e-05 0.0038 9.5 0.0 20 46 163 189 148 197 0.78 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 5_7 - 119 Sigma70_r4_2 PF08281.7 54 3.6e-05 16.1 0.0 1 1 6.3e-07 5.9e-05 15.4 0.0 31 47 22 38 9 39 0.92 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_33 - 252 Rep_3 PF01051.16 222 3.1e-50 163.6 0.0 1 1 7.5e-52 3.6e-50 163.4 0.0 3 222 16 242 14 242 0.91 # 31828 # 32583 # -1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.474 5_5 - 326 Rep_3 PF01051.16 222 1.5e-33 109.0 0.1 1 1 4.3e-35 2.1e-33 108.6 0.1 3 214 10 265 8 271 0.90 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 2_18 - 235 rve PF00665.21 120 3.1e-13 42.7 0.1 1 2 0.03 1.4 1.9 0.0 78 102 27 49 6 54 0.84 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_18 - 235 rve PF00665.21 120 3.1e-13 42.7 0.1 2 2 1.2e-13 5.8e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_7 - 236 rve PF00665.21 120 1.2e-08 27.9 0.0 1 1 5.8e-10 2.7e-08 26.8 0.0 2 47 173 225 172 233 0.86 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 3_2 - 522 AAA_23 PF13476.1 202 3.1e-12 40.0 0.0 1 1 1.6e-13 1.5e-11 37.8 0.0 1 53 6 58 6 115 0.85 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_18 - 188 Methyltransf_26 PF13659.1 117 2.4e-14 46.2 0.0 1 1 9e-16 4.3e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_28 - 228 Methyltransf_26 PF13659.1 117 8.2e-12 38.1 0.0 1 2 4.1e-07 2e-05 17.5 0.0 57 114 7 71 2 74 0.69 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 Methyltransf_26 PF13659.1 117 8.2e-12 38.1 0.0 2 2 1.9e-07 9.2e-06 18.6 0.0 4 45 167 207 164 223 0.82 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_11 - 1588 Zeta_toxin PF06414.7 201 0.00054 11.9 0.0 1 1 1.4e-05 0.0013 10.6 0.0 14 56 224 267 215 305 0.84 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 2_16 - 562 F420_oxidored PF03807.12 96 0.013 8.9 6.4 1 3 0.0019 0.18 5.2 1.1 2 33 101 128 100 132 0.87 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 F420_oxidored PF03807.12 96 0.013 8.9 6.4 2 3 0.0046 0.44 3.9 0.2 1 35 272 302 272 338 0.90 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 F420_oxidored PF03807.12 96 0.013 8.9 6.4 3 3 0.082 7.8 -0.1 0.0 23 52 351 381 341 388 0.78 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 3_2 - 522 SMC_N PF02463.14 220 2.4e-11 36.1 0.0 1 2 1.4e-11 1.3e-09 30.4 0.0 2 69 4 67 3 79 0.85 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 SMC_N PF02463.14 220 2.4e-11 36.1 0.0 2 2 0.0024 0.23 3.5 0.0 163 204 281 321 253 330 0.85 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 6_2 - 187 HTH_Tnp_1 PF01527.15 76 0.00019 14.3 0.1 1 1 8.9e-06 0.00042 13.1 0.1 15 44 154 182 140 186 0.79 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_18 - 235 HTH_Tnp_1 PF01527.15 76 0.00024 13.9 0.3 1 1 1.1e-05 0.00051 12.9 0.3 4 51 6 58 4 63 0.79 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 5_7 - 119 GerE PF00196.14 58 9.4e-05 14.6 0.0 1 1 1.8e-06 0.00017 13.8 0.0 17 40 16 39 9 40 0.83 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_18 - 235 DDE_3 PF13358.1 146 0.00065 12.3 0.0 1 1 2.1e-05 0.002 10.7 0.0 32 90 82 141 59 146 0.87 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_32 - 389 MipZ PF09140.6 261 4.1e-06 18.8 0.4 1 2 3.5e-06 0.00033 12.6 0.0 2 47 108 153 107 157 0.87 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 MipZ PF09140.6 261 4.1e-06 18.8 0.4 2 2 0.0011 0.11 4.4 0.0 88 134 224 270 197 292 0.84 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_28 - 228 UPF0020 PF01170.13 180 1.2e-05 17.7 0.0 1 2 0.00029 0.028 6.8 0.0 103 119 17 33 4 88 0.73 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 UPF0020 PF01170.13 180 1.2e-05 17.7 0.0 2 2 6.2e-05 0.0058 9.0 0.0 28 54 163 189 158 221 0.67 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_18 - 188 Methyltransf_25 PF13649.1 101 0.00011 15.4 0.0 1 1 1.7e-06 0.00016 14.9 0.0 1 101 54 142 54 142 0.81 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 3_2 - 522 AAA_21 PF13304.1 303 5.9e-14 45.5 0.1 1 2 7.1e-07 6.7e-05 15.7 0.0 2 24 27 49 27 76 0.83 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 AAA_21 PF13304.1 303 5.9e-14 45.5 0.1 2 2 2.1e-10 2e-08 27.3 0.2 261 301 280 318 243 320 0.90 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 1588 AAA PF00004.24 132 6.7e-05 15.9 0.0 1 1 2e-06 0.00019 14.5 0.0 1 94 229 318 229 343 0.70 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_6 - 653 KorB PF08535.5 93 6.7e-05 15.9 0.0 1 1 2.2e-06 0.00021 14.3 0.0 2 43 152 193 151 204 0.93 # 4500 # 6458 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.011 8.1 9.2 1 3 0.0002 0.019 7.4 0.3 22 36 53 66 43 69 0.86 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.011 8.1 9.2 2 3 0.0041 0.39 3.2 0.5 2 10 73 81 72 82 0.83 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 zf-C4_Topoisom PF01396.14 39 0.011 8.1 9.2 3 3 0.022 2.1 0.9 0.2 3 15 362 374 361 379 0.86 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 2_9 - 400 TIGR01394 TIGR01394 594 0.0014 9.3 0.0 1 1 2.2e-05 0.0021 8.8 0.0 408 486 267 343 261 354 0.84 # 5010 # 6209 # -1 # ID=2_9;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.636 1_28 - 228 N6_N4_Mtase PF01555.13 231 6e-37 120.1 0.0 1 2 1.2e-15 1.1e-13 44.0 0.0 1 114 21 124 21 137 0.89 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 N6_N4_Mtase PF01555.13 231 6e-37 120.1 0.0 2 2 5.4e-25 5.1e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 2_13 - 145 MerR_1 PF13411.1 69 3.8e-20 64.3 0.0 1 1 1.9e-21 5.9e-20 63.7 0.0 2 67 9 75 8 77 0.96 # 9590 # 10024 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 121 MerR_1 PF13411.1 69 5.2e-14 44.7 0.0 1 1 2.6e-15 8.4e-14 44.0 0.0 1 68 4 72 4 73 0.97 # 2051 # 2413 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 1_32 - 389 MerR_1 PF13411.1 69 0.00034 13.2 0.0 1 1 3.2e-05 0.001 11.7 0.0 2 44 41 88 40 105 0.75 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_5 - 564 DNA_pol3_beta PF00712.14 120 0.00039 13.2 0.6 1 2 2.2e-05 0.0021 10.8 0.1 11 115 241 346 235 351 0.79 # 4007 # 5698 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 3_5 - 564 DNA_pol3_beta PF00712.14 120 0.00039 13.2 0.6 2 2 0.076 7.3 -0.6 0.1 27 52 517 544 507 556 0.66 # 4007 # 5698 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 3_1 - 341 cobW PF02492.14 178 0.00077 11.8 0.0 1 1 1.4e-05 0.0013 11.0 0.0 4 30 5 31 3 53 0.72 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_5 - 564 AAA_16 PF13191.1 185 7.4e-05 15.6 0.0 1 1 3.4e-06 0.00016 14.5 0.0 14 64 46 96 38 113 0.77 # 4007 # 5698 # 1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.405 1_11 - 1588 AAA_16 PF13191.1 185 0.00015 14.7 0.0 1 1 1.3e-05 0.00064 12.6 0.0 10 58 217 259 210 315 0.71 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_11 - 1588 AAA_22 PF13401.1 131 9.3e-06 18.7 0.3 1 1 1.6e-06 7.5e-05 15.7 0.3 3 98 225 300 220 335 0.68 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 3_1 - 341 AAA_22 PF13401.1 131 3.2e-05 16.9 0.0 1 1 4.7e-06 0.00022 14.2 0.0 8 111 5 155 4 167 0.75 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_4 - 121 DUF977 PF06163.6 127 0.00028 13.5 0.1 1 1 5.9e-06 0.00056 12.5 0.0 27 70 4 47 2 65 0.90 # 2051 # 2413 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 1_32 - 389 HTH_AraC PF00165.18 42 0.00085 12.1 0.0 1 1 1.8e-05 0.0017 11.1 0.0 4 26 35 57 33 62 0.81 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 6_2 - 187 NUMOD1 PF07453.8 37 0.00051 12.8 0.0 1 1 1.1e-05 0.001 11.8 0.0 19 37 164 182 164 182 0.94 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 3_2 - 522 AAA_29 PF13555.1 62 9e-08 24.5 0.0 1 1 1.9e-09 1.8e-07 23.5 0.0 2 49 5 50 4 57 0.84 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_16 - 562 Pyr_redox PF00070.22 80 1.6e-19 63.0 4.9 1 2 2.2e-06 0.00021 14.6 1.2 2 31 101 130 100 132 0.95 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 Pyr_redox PF00070.22 80 1.6e-19 63.0 4.9 2 2 3.3e-17 3.2e-15 49.2 0.1 1 70 272 340 272 351 0.90 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 5_7 - 119 HTH_Tnp_Tc3_1 PF11427.3 50 0.00021 13.8 0.0 1 1 3.6e-06 0.00034 13.1 0.0 12 44 9 41 2 43 0.92 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 6_2 - 187 HTH_Tnp_IS630 PF01710.11 120 3.1e-05 16.5 0.0 1 1 1.3e-06 6.1e-05 15.6 0.0 10 42 157 185 151 186 0.86 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_Tnp_IS630 PF01710.11 120 8.9e-05 15.0 0.0 1 1 3.9e-06 0.00019 14.0 0.0 8 44 148 184 145 185 0.90 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_16 - 562 HI0933_like PF03486.9 409 9.7e-09 26.9 5.3 1 2 9.7e-07 9.3e-05 13.8 2.9 2 33 100 131 99 139 0.91 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 HI0933_like PF03486.9 409 9.7e-09 26.9 5.3 2 2 1.7e-06 0.00016 13.0 0.0 83 164 286 363 281 384 0.86 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_18 - 235 HTH_32 PF13565.1 77 1.2e-06 22.1 0.2 1 1 1.1e-07 5.4e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 6_2 - 187 HTH_32 PF13565.1 77 0.00068 13.3 5.4 1 1 5.3e-05 0.0025 11.5 3.5 7 77 124 182 119 182 0.68 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 6_2 - 187 HTH_3 PF01381.17 55 0.0004 13.1 0.4 1 1 1.1e-05 0.0011 11.7 0.4 2 31 152 183 151 184 0.86 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 5_7 - 119 HTH_23 PF13384.1 50 5.9e-08 25.1 0.1 1 1 8.3e-09 1.1e-07 24.2 0.1 9 39 9 39 8 40 0.92 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_7 - 236 HTH_23 PF13384.1 50 1.4e-07 23.9 0.9 1 1 2.7e-08 3.7e-07 22.5 0.9 3 45 23 71 21 77 0.87 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_18 - 235 HTH_23 PF13384.1 50 5.8e-06 18.8 0.7 1 1 1.3e-05 0.00018 14.0 0.1 28 42 41 55 40 62 0.87 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 653 HTH_23 PF13384.1 50 9.9e-06 18.0 0.0 1 1 4e-06 5.4e-05 15.7 0.0 13 40 149 176 143 180 0.91 # 4500 # 6458 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.585 6_2 - 187 HTH_23 PF13384.1 50 2.2e-05 16.9 1.3 1 1 2e-06 2.8e-05 16.6 0.1 10 39 151 183 148 184 0.82 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_23 PF13384.1 50 4.2e-05 16.0 0.3 1 1 3.1e-06 4.2e-05 16.0 0.3 5 39 146 180 142 184 0.87 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_10 - 226 HTH_23 PF13384.1 50 0.00085 11.9 0.2 1 1 0.00034 0.0046 9.5 0.0 10 35 22 51 14 64 0.75 # 6288 # 6965 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 6_2 - 187 HTH_7 PF02796.10 45 1.1e-16 53.3 0.3 1 1 7.1e-18 2.3e-16 52.3 0.3 1 44 141 184 141 185 0.98 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 4_2 - 186 HTH_7 PF02796.10 45 2.2e-13 42.7 1.1 1 1 1.5e-14 4.9e-13 41.6 0.1 1 44 141 181 141 182 0.97 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_7 - 119 HTH_7 PF02796.10 45 1.5e-06 20.9 0.2 1 1 9.2e-08 2.9e-06 20.0 0.2 7 42 3 38 1 40 0.91 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_11 - 1588 NB-ARC PF00931.17 287 6.6e-06 17.9 0.4 1 1 3.5e-07 3.3e-05 15.6 0.4 9 50 216 254 209 349 0.71 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 2_7 - 236 HTH_29 PF13551.1 112 4.3e-07 23.0 1.7 1 1 2.2e-08 7e-07 22.3 0.3 13 77 39 109 27 132 0.79 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 5_7 - 119 HTH_29 PF13551.1 112 9.7e-05 15.4 0.0 1 1 5.2e-06 0.00016 14.6 0.0 8 34 14 39 8 51 0.84 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_2 - 186 HTH_29 PF13551.1 112 0.0001 15.3 0.6 1 2 0.074 2.3 1.3 0.2 24 46 114 136 88 153 0.67 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 4_2 - 186 HTH_29 PF13551.1 112 0.0001 15.3 0.6 2 2 3.1e-05 0.00097 12.2 0.0 4 35 151 181 148 184 0.90 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 2_16 - 562 GIDA PF01134.17 392 2e-06 19.7 2.9 1 4 2.1e-08 2e-06 19.7 2.9 1 52 100 153 100 166 0.88 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 GIDA PF01134.17 392 2e-06 19.7 2.9 2 4 0.074 7.1 -1.9 0.0 3 32 274 303 272 335 0.85 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 GIDA PF01134.17 392 2e-06 19.7 2.9 3 4 0.067 6.4 -1.7 0.0 128 167 339 363 311 382 0.57 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 GIDA PF01134.17 392 2e-06 19.7 2.9 4 4 0.03 2.9 -0.6 0.0 350 385 391 426 382 430 0.76 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_18 - 188 Met_10 PF02475.11 200 0.00049 12.5 0.0 1 1 7e-06 0.00067 12.1 0.0 99 189 48 132 38 145 0.78 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_16 - 562 NAD_binding_8 PF13450.1 68 6.5e-05 15.8 1.2 1 2 6.9e-07 6.5e-05 15.8 1.2 1 35 103 136 103 155 0.91 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 NAD_binding_8 PF13450.1 68 6.5e-05 15.8 1.2 2 2 0.091 8.6 -0.6 0.1 1 25 275 299 275 304 0.78 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_18 - 235 DDE_Tnp_IS66 PF03050.9 271 2.2e-12 39.5 0.3 1 1 3e-14 2.8e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_18 - 188 Methyltransf_31 PF13847.1 152 5.9e-07 22.0 0.0 1 1 7.6e-09 7.2e-07 21.7 0.0 5 119 52 162 48 183 0.83 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_11 - 1588 Arch_ATPase PF01637.13 234 4e-06 19.5 3.0 1 1 4.8e-08 4.6e-06 19.3 0.3 3 83 211 306 210 354 0.66 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_32 - 389 TIGR01968 TIGR01968 261 4.2e-08 25.3 0.1 1 2 2.6e-06 0.00025 13.0 0.0 3 37 108 142 106 145 0.93 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 TIGR01968 TIGR01968 261 4.2e-08 25.3 0.1 2 2 1.5e-05 0.0015 10.4 0.0 104 145 227 268 215 340 0.81 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_11 - 1588 AAA_18 PF13238.1 129 0.00015 14.9 0.1 1 1 1.4e-05 0.0013 11.9 0.1 1 106 229 353 229 368 0.76 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 3_2 - 522 TIGR00611 TIGR00611 365 6e-09 27.9 2.7 1 3 2.2e-10 2.1e-08 26.2 0.0 3 56 4 57 2 79 0.92 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 TIGR00611 TIGR00611 365 6e-09 27.9 2.7 2 3 0.04 3.8 -1.0 0.1 322 345 297 319 270 330 0.72 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 TIGR00611 TIGR00611 365 6e-09 27.9 2.7 3 3 0.02 1.9 -0.0 0.2 150 191 453 493 402 508 0.46 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_28 - 228 Methyltransf_15 PF09445.5 164 0.00076 11.9 0.0 1 2 0.045 4.3 -0.3 0.0 53 79 4 29 2 32 0.90 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 1_28 - 228 Methyltransf_15 PF09445.5 164 0.00076 11.9 0.0 2 2 4.2e-05 0.004 9.5 0.0 3 31 166 194 164 209 0.86 # 26353 # 27036 # -1 # ID=1_28;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.563 6_2 - 187 HTH_psq PF05225.11 45 0.00012 14.5 0.0 1 1 2.5e-06 0.00024 13.5 0.0 21 39 166 184 165 186 0.91 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_18 - 188 Methyltransf_12 PF08242.7 99 1.1e-05 18.8 0.0 1 1 2e-07 1.9e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_18 - 188 Methyltrans_SAM PF10672.4 286 0.00087 11.0 0.0 1 1 1.3e-05 0.0012 10.5 0.0 196 261 113 173 100 180 0.78 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_11 - 1588 DUF258 PF03193.11 161 4.7e-05 15.5 0.0 1 1 1.3e-06 0.00012 14.1 0.0 14 62 204 253 191 264 0.81 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 2_7 - 236 HTH_28 PF13518.1 52 5.1e-09 28.9 1.0 1 1 4.6e-10 8.7e-09 28.2 0.1 1 46 26 78 26 87 0.76 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 6_2 - 187 HTH_28 PF13518.1 52 4.6e-05 16.3 0.1 1 1 2.4e-06 4.6e-05 16.3 0.1 9 34 158 183 147 184 0.84 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_18 - 235 HTH_28 PF13518.1 52 5.5e-05 16.0 1.2 1 1 1.3e-05 0.00024 14.0 1.2 22 36 40 54 13 55 0.76 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 4_2 - 186 HTH_28 PF13518.1 52 0.00013 14.8 0.0 1 1 2.1e-05 0.0004 13.2 0.0 8 33 154 179 148 184 0.82 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_7 - 119 HTH_28 PF13518.1 52 0.0004 13.3 0.1 1 1 4.6e-05 0.00087 12.2 0.1 14 34 19 39 8 40 0.74 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_10 - 226 HTH_Tnp_1_2 PF13022.1 142 0.00075 12.1 0.0 1 1 1.2e-05 0.0011 11.6 0.0 22 77 24 73 5 79 0.76 # 6288 # 6965 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 2_13 - 145 MerR-DNA-bind PF09278.6 65 3.4e-21 68.3 0.9 1 1 1.6e-22 7.8e-21 67.2 0.9 1 65 51 113 51 113 0.95 # 9590 # 10024 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 2_4 - 121 MerR-DNA-bind PF09278.6 65 0.00075 12.8 7.4 1 1 2.5e-05 0.0012 12.1 7.4 1 64 47 108 47 109 0.85 # 2051 # 2413 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 5_7 - 119 HTH_24 PF13412.1 48 0.00081 11.7 0.0 1 1 1.8e-05 0.0017 10.6 0.0 21 39 21 39 20 40 0.94 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 1_18 - 188 TIGR03533 TIGR03533 284 2.1e-05 16.5 0.0 1 1 3.5e-07 3.3e-05 15.8 0.0 116 210 45 133 37 141 0.87 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_18 - 188 TIGR03534 TIGR03534 253 3e-08 25.9 0.0 1 1 3.7e-10 3.5e-08 25.7 0.0 81 175 45 131 11 148 0.85 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 6_2 - 187 HTH_10 PF04967.7 53 1.1e-05 17.8 0.2 1 2 0.055 5.2 -0.3 0.1 3 18 124 139 123 154 0.71 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 6_2 - 187 HTH_10 PF04967.7 53 1.1e-05 17.8 0.2 2 2 8.6e-07 8.2e-05 15.0 0.0 27 45 165 183 162 185 0.93 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 2_16 - 562 TIGR01292 TIGR01292 300 1.7e-19 62.2 3.6 1 2 1.5e-05 0.0014 9.9 1.3 2 39 100 137 99 143 0.90 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 TIGR01292 TIGR01292 300 1.7e-19 62.2 3.6 2 2 1.9e-18 1.8e-16 52.3 0.0 142 296 271 425 212 427 0.80 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 1_11 - 1588 Miro PF08477.8 119 0.00016 15.0 0.1 1 1 5.6e-06 0.00053 13.3 0.1 2 44 229 270 227 302 0.73 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_32 - 389 HTH_31 PF13560.1 64 0.00012 15.1 0.4 1 1 3.8e-06 0.00036 13.6 0.2 12 45 37 69 31 73 0.87 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 3_1 - 341 UvrD_C_2 PF13538.1 104 7.3e-05 15.8 0.0 1 1 1.5e-06 0.00014 14.8 0.0 37 103 247 329 224 330 0.65 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_18 - 188 TIGR00755 TIGR00755 256 2.4e-09 29.3 0.0 1 1 3.4e-11 3.2e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 5_7 - 119 HTH_36 PF13730.1 55 0.00031 13.8 0.0 1 1 5.7e-06 0.00054 12.9 0.0 28 47 20 39 3 40 0.88 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_7 - 236 HTH_Tnp_Mu_2 PF09039.6 108 2.3e-06 20.2 0.0 1 1 5.8e-08 5.5e-06 19.0 0.0 37 101 100 163 72 166 0.91 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 2_16 - 562 FAD_binding_2 PF00890.19 417 4.8e-06 18.4 5.5 1 3 5e-08 4.8e-06 18.4 5.5 2 32 101 131 100 138 0.91 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 FAD_binding_2 PF00890.19 417 4.8e-06 18.4 5.5 2 3 0.026 2.5 -0.4 0.6 146 204 315 366 300 385 0.69 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 FAD_binding_2 PF00890.19 417 4.8e-06 18.4 5.5 3 3 0.011 1.1 0.8 0.1 374 402 375 405 371 418 0.87 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 3_1 - 341 Viral_helicase1 PF01443.13 234 6.2e-12 38.3 0.1 1 2 1.9e-07 1.8e-05 17.1 0.0 2 30 5 38 4 59 0.76 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_1 - 341 Viral_helicase1 PF01443.13 234 6.2e-12 38.3 0.1 2 2 7.2e-08 6.8e-06 18.5 0.1 63 233 133 330 122 331 0.67 # 366 # 1388 # -1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 3_2 - 522 AAA_15 PF13175.1 415 3.2e-17 55.4 0.1 1 2 1.7e-09 1.6e-07 23.5 0.0 2 45 5 47 4 63 0.90 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 AAA_15 PF13175.1 415 3.2e-17 55.4 0.1 2 2 1.7e-11 1.6e-09 30.1 0.1 332 414 235 318 183 319 0.74 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 1_11 - 1588 AAA_14 PF13173.1 128 0.00027 13.7 0.2 1 1 2.9e-06 0.00027 13.7 0.2 2 101 226 333 225 340 0.72 # 8475 # 13238 # -1 # ID=1_11;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.349 1_32 - 389 VirC1 PF07015.6 231 6.3e-05 14.9 0.1 1 2 0.00028 0.027 6.3 0.0 4 42 109 147 107 154 0.91 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 VirC1 PF07015.6 231 6.3e-05 14.9 0.1 2 2 0.0003 0.029 6.2 0.1 84 139 235 290 222 312 0.77 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 6_4 - 335 Transposase_20 PF02371.11 87 9.8e-25 79.4 0.2 1 1 4.6e-26 2.2e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 4145 # 5149 # 1 # ID=6_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 2_12 - 335 Transposase_20 PF02371.11 87 1e-24 79.3 0.2 1 1 4.6e-26 2.2e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 8486 # 9490 # -1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 5_7 - 119 HTH_Tnp_ISL3 PF13542.1 52 0.00012 14.1 0.0 1 1 3.1e-06 0.00029 12.9 0.0 31 49 21 39 20 40 0.90 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_13 - 145 MerR PF00376.18 38 9.6e-15 46.8 0.1 1 1 7.3e-16 1.7e-14 46.0 0.1 1 38 9 46 9 46 0.99 # 9590 # 10024 # -1 # ID=2_13;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.600 1_32 - 389 MerR PF00376.18 38 3.6e-07 22.6 0.0 1 1 3.5e-08 8.3e-07 21.4 0.0 1 28 41 68 41 74 0.95 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 2_4 - 121 MerR PF00376.18 38 1.2e-06 20.9 0.0 1 1 7.9e-08 1.9e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 2051 # 2413 # 1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.697 5_7 - 119 MerR PF00376.18 38 0.00085 11.8 3.0 1 2 0.00054 0.013 8.0 0.1 4 21 22 39 19 49 0.84 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 5_7 - 119 MerR PF00376.18 38 0.00085 11.8 3.0 2 2 0.011 0.26 3.8 0.7 14 22 90 98 89 110 0.69 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 6_2 - 187 CENP-B_N PF04218.8 53 2.8e-06 19.6 0.0 1 1 5.4e-08 5.1e-06 18.7 0.0 17 43 156 182 152 186 0.92 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 1_18 - 188 MTS PF05175.9 170 8.3e-10 31.1 0.0 1 1 1.2e-11 1.1e-09 30.7 0.0 31 141 50 149 41 166 0.84 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 2_17 - 169 HTH_15 PF12324.3 77 4.3e-32 102.5 0.0 1 1 9e-34 8.5e-32 101.6 0.0 4 77 2 75 1 75 0.98 # 12509 # 13015 # 1 # ID=2_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.574 2_16 - 562 AlaDh_PNT_C PF01262.16 168 7.1e-07 21.8 4.6 1 2 1.5e-06 0.00014 14.2 1.3 3 50 81 128 79 131 0.91 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 AlaDh_PNT_C PF01262.16 168 7.1e-07 21.8 4.6 2 2 9.9e-05 0.0094 8.3 0.1 19 63 269 313 260 359 0.86 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 9_1 - 168 DDE_Tnp_IS1 PF03400.8 131 9.7e-80 257.9 0.8 1 1 2.4e-81 1.2e-79 257.7 0.8 1 131 37 167 37 167 0.99 # 16 # 519 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.548 6_5 - 37 DDE_Tnp_IS1 PF03400.8 131 1e-18 60.6 0.3 1 1 2.2e-20 1.1e-18 60.5 0.3 96 131 1 36 1 36 0.98 # 5501 # 5611 # -1 # ID=6_5;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.495 2_16 - 562 3HCDH_N PF02737.13 180 0.0029 10.1 6.7 1 2 0.0025 0.24 3.9 2.5 1 30 100 129 100 133 0.93 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 3HCDH_N PF02737.13 180 0.0029 10.1 6.7 2 2 0.00014 0.013 7.9 0.1 2 36 273 307 272 359 0.71 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 Glyco_transf_4 PF13439.1 177 7.4e-06 18.6 0.5 1 1 1.6e-07 1.5e-05 17.6 0.1 13 39 277 303 274 346 0.84 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_18 - 235 DDE_Tnp_IS240 PF13610.1 140 7.2e-53 171.2 0.0 1 1 1.1e-54 1e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 13052 # 13756 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_2 - 522 TIGR00634 TIGR00634 563 0.00022 12.7 0.2 1 1 4.2e-06 0.0004 11.9 0.0 1 46 3 48 3 69 0.93 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 5_7 - 119 HTH_17 PF12728.2 51 0.00025 14.1 1.4 1 2 3.1e-05 0.0015 11.7 0.0 6 41 22 56 20 65 0.77 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 5_7 - 119 HTH_17 PF12728.2 51 0.00025 14.1 1.4 2 2 0.057 2.7 1.2 0.4 14 34 88 109 82 116 0.81 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_7 - 236 HTH_17 PF12728.2 51 0.00069 12.7 0.0 1 1 3.3e-05 0.0015 11.6 0.0 7 24 48 65 46 89 0.86 # 3425 # 4132 # 1 # ID=2_7;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 7_1 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.0065 9.2 6.7 1 2 0.0026 0.24 4.1 1.2 19 32 73 85 57 97 0.74 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 7_1 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.0065 9.2 6.7 2 2 0.0005 0.048 6.4 0.4 8 32 350 374 346 379 0.84 # 176 # 1375 # -1 # ID=7_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.562 5_7 - 119 HTH_11 PF08279.7 55 1.6e-05 17.3 0.0 1 1 7e-07 3.3e-05 16.4 0.0 18 37 20 39 5 40 0.80 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 6_2 - 187 HTH_11 PF08279.7 55 0.00012 14.6 0.1 1 1 2.5e-05 0.0012 11.4 0.0 20 37 166 183 162 184 0.91 # 536 # 1096 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.578 5_7 - 119 Sigma70_ECF PF07638.6 185 0.00023 13.7 0.0 1 1 3.8e-06 0.00036 13.1 0.0 143 174 9 40 2 52 0.86 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 4_2 - 186 TrmB PF01978.14 68 5.3e-05 15.8 0.0 1 1 1.1e-06 0.00011 14.8 0.0 19 44 155 180 150 181 0.89 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_7 - 119 LacI PF00356.16 46 0.00026 13.5 0.0 1 1 5.9e-06 0.00056 12.4 0.0 2 34 20 52 19 62 0.91 # 4396 # 4752 # 1 # ID=5_7;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.487 2_16 - 562 Pyr_redox_2 PF07992.9 201 7.5e-42 136.3 0.0 1 1 2.8e-43 2.7e-41 134.5 0.0 1 199 100 407 100 409 0.96 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 3_2 - 522 DUF2813 PF11398.3 373 3.1e-05 16.0 1.2 1 2 4.6e-06 0.00044 12.2 0.0 11 49 12 51 3 56 0.79 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 3_2 - 522 DUF2813 PF11398.3 373 3.1e-05 16.0 1.2 2 2 0.0067 0.64 1.8 0.0 287 333 279 326 250 333 0.82 # 1373 # 2938 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.534 2_16 - 562 DAO PF01266.19 358 8.7e-11 34.0 10.4 1 2 4.6e-08 4.4e-06 18.6 1.4 2 35 101 134 100 161 0.85 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 2_16 - 562 DAO PF01266.19 358 8.7e-11 34.0 10.4 2 2 1.1e-08 1.1e-06 20.6 0.9 151 205 314 367 302 479 0.80 # 10809 # 12494 # 1 # ID=2_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.644 4_2 - 186 HTH_20 PF12840.2 61 1.9e-06 20.5 0.2 1 2 0.011 0.35 3.6 0.0 33 52 8 27 4 28 0.91 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 4_2 - 186 HTH_20 PF12840.2 61 1.9e-06 20.5 0.2 2 2 2.7e-05 0.00086 12.0 0.1 3 43 110 177 108 180 0.91 # 3231 # 3788 # 1 # ID=4_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.527 5_5 - 326 HTH_20 PF12840.2 61 7.3e-05 15.4 0.0 1 2 0.0022 0.069 5.9 0.0 24 47 102 125 97 125 0.89 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 5_5 - 326 HTH_20 PF12840.2 61 7.3e-05 15.4 0.0 2 2 0.001 0.033 6.9 0.1 19 58 213 259 185 262 0.77 # 2673 # 3650 # -1 # ID=5_5;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.522 2_10 - 226 HTH_20 PF12840.2 61 0.00023 13.8 0.1 1 1 5.4e-05 0.0017 11.0 0.0 21 46 30 55 18 63 0.85 # 6288 # 6965 # 1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.627 1_18 - 188 RrnaAD PF00398.15 262 3.3e-09 28.9 0.0 1 1 4.4e-11 4.2e-09 28.6 0.0 9 113 29 128 24 148 0.89 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_18 - 188 Methyltransf_18 PF12847.2 112 2.8e-10 33.6 0.0 1 1 6.3e-12 6e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 20067 # 20630 # -1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.585 1_32 - 389 ArsA_ATPase PF02374.10 305 1.7e-06 20.1 0.4 1 2 1.7e-06 0.00016 13.6 0.1 9 36 115 142 109 151 0.89 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 ArsA_ATPase PF02374.10 305 1.7e-06 20.1 0.4 2 2 0.0011 0.11 4.3 0.0 123 136 231 244 221 251 0.84 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 AAA_31 PF13614.1 157 9.3e-10 31.5 0.0 1 2 1.4e-08 1.3e-06 21.3 0.0 2 49 108 155 107 195 0.91 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_32 - 389 AAA_31 PF13614.1 157 9.3e-10 31.5 0.0 2 2 0.00018 0.017 7.9 0.1 110 152 227 268 223 272 0.84 # 30074 # 31240 # -1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.471 1_16 - 176 SSB PF00436.20 104 8.5e-41 130.9 0.3 1 1 1.1e-42 1.1e-40 130.6 0.3 1 101 6 109 6 112 0.95 # 18707 # 19234 # -1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.585 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/d4e98d69-134f-4fa3-adbe-5719fd41948c # Target file: checkm_output/bins/pm1224/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1224/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/d4e98d69-134f-4fa3-adbe-5719fd41948c checkm_output/bins/pm1224/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:37:55 2017 # [ok]