# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 1 3 0.0039 0.78 2.4 0.0 187 220 94 125 59 130 0.79 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 2 3 3.3e-06 0.00066 12.5 0.0 132 231 218 308 202 332 0.82 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 K_oxygenase PF13434.1 341 1.1e-05 18.3 0.0 3 3 0.057 11 -1.4 0.0 132 160 346 369 314 377 0.67 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_58 - 505 HTH_IclR PF09339.5 52 3.5e-07 23.6 0.2 1 2 1.6e-07 8.1e-06 19.3 0.0 17 41 14 38 1 38 0.81 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_58 - 505 HTH_IclR PF09339.5 52 3.5e-07 23.6 0.2 2 2 0.08 3.9 1.1 0.0 6 31 427 454 426 455 0.88 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_32 - 91 HTH_IclR PF09339.5 52 5.7e-06 19.8 0.0 1 1 2.1e-07 1e-05 18.9 0.0 4 43 9 47 8 49 0.92 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 10_1 - 60 HTH_IclR PF09339.5 52 8.3e-05 16.0 1.1 1 1 1.8e-06 8.9e-05 16.0 0.3 12 46 26 60 24 60 0.88 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 3_16 - 98 HTH_IclR PF09339.5 52 0.0016 11.9 0.0 1 1 8.3e-05 0.0041 10.6 0.0 25 49 38 62 28 64 0.95 # 8294 # 8587 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 1_14 - 323 ABC_tran PF00005.22 137 0.0014 12.8 0.0 1 1 1.3e-05 0.0027 11.9 0.0 11 46 61 96 55 117 0.85 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_51 - 186 HTH_22 PF13309.1 64 2.3e-05 18.0 0.0 1 1 1.5e-06 0.00015 15.4 0.0 47 64 166 183 163 183 0.94 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_59 - 515 HTH_22 PF13309.1 64 2.6e-05 17.9 0.2 1 2 3.4e-05 0.0033 11.1 0.0 43 61 136 154 114 156 0.93 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_22 PF13309.1 64 2.6e-05 17.9 0.2 2 2 0.0075 0.75 3.6 0.1 8 34 210 236 203 238 0.84 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_92 - 91 HTH_35 PF13693.1 78 2.8e-16 53.0 0.2 1 1 1.8e-18 3.6e-16 52.7 0.2 7 71 20 83 15 89 0.89 # 82881 # 83153 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 1_57 - 262 DUF815 PF05673.8 250 0.00044 13.1 0.0 1 1 3.6e-06 0.00072 12.4 0.0 23 76 65 122 46 139 0.79 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_43 - 102 HTH_AsnC-type PF13404.1 42 2e-05 17.9 0.0 1 1 3.8e-07 3.8e-05 17.1 0.0 20 42 36 58 30 58 0.91 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_58 - 505 HTH_AsnC-type PF13404.1 42 0.0012 12.3 0.0 1 1 3.2e-05 0.0032 10.9 0.0 18 35 16 33 13 36 0.94 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_31 - 212 N6_Mtase PF02384.11 311 7.3e-07 22.3 0.0 1 1 5.9e-09 1.2e-06 21.7 0.0 3 97 71 166 69 201 0.72 # 22924 # 23559 # 1 # ID=2_31;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.522 1_35 - 185 TolB_N PF04052.8 105 0.002 12.1 0.0 1 2 6.8e-05 0.013 9.4 0.0 22 57 25 60 19 72 0.81 # 27593 # 28147 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 1_35 - 185 TolB_N PF04052.8 105 0.002 12.1 0.0 2 2 0.058 11 0.0 0.0 45 71 135 162 132 164 0.80 # 27593 # 28147 # 1 # ID=1_35;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.472 1_59 - 515 rve_3 PF13683.1 67 3.7e-14 45.9 0.1 1 1 1.1e-15 2.2e-13 43.5 0.0 4 67 437 502 434 502 0.95 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 1 2 3.8e-08 2.5e-06 20.9 0.0 36 81 168 211 136 234 0.79 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 FtsK_SpoIIIE PF01580.13 205 1.7e-07 24.8 0.0 2 2 0.042 2.8 1.2 0.0 176 204 481 509 472 510 0.86 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 FtsK_SpoIIIE PF01580.13 205 6e-07 23.0 0.1 1 1 2.6e-08 1.7e-06 21.5 0.1 33 132 134 241 88 386 0.64 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_21 - 206 FtsK_SpoIIIE PF01580.13 205 0.0014 11.9 0.2 1 1 7.1e-05 0.0047 10.3 0.0 34 53 4 23 1 28 0.83 # 16977 # 17594 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_58 - 505 HTH_40 PF14493.1 91 0.00012 16.2 0.0 1 1 4.2e-06 0.00084 13.5 0.0 10 36 12 38 6 51 0.90 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_58 - 505 HTH_38 PF13936.1 44 3.5e-05 17.2 0.2 1 1 1.2e-06 7.7e-05 16.1 0.2 13 41 7 36 5 38 0.87 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_92 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 1 2 9.7e-05 0.0064 10.0 0.1 9 39 16 47 14 49 0.87 # 82881 # 83153 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 1_92 - 91 HTH_38 PF13936.1 44 0.00011 15.6 0.0 2 2 0.0094 0.62 3.6 0.0 25 35 59 69 53 72 0.92 # 82881 # 83153 # 1 # ID=1_92;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.505 2_33 - 394 HTH_38 PF13936.1 44 0.00077 12.9 0.0 1 1 2.2e-05 0.0014 12.0 0.0 5 33 120 149 116 157 0.83 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_43 - 102 SpoIIID PF12116.3 82 0.0018 12.1 0.3 1 1 3.4e-05 0.0068 10.3 0.3 10 38 23 52 18 83 0.81 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_65 - 565 FAD_oxidored PF12831.2 428 5.8e-06 19.4 3.6 1 1 2.9e-08 5.8e-06 19.4 3.6 2 41 100 138 99 167 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 MobB PF03205.9 140 0.001 12.6 0.0 1 1 1.7e-05 0.0034 10.9 0.0 4 34 176 206 175 214 0.90 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_87 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 1 2 5.8e-06 0.00057 13.1 0.1 2 38 8 44 7 64 0.81 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 UvrD-helicase PF00580.16 315 1.1e-16 54.9 3.9 2 2 6.8e-15 6.7e-13 42.4 0.3 236 305 161 239 46 246 0.72 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_2 - 504 UvrD-helicase PF00580.16 315 0.0012 12.0 0.8 1 2 0.00071 0.07 6.2 0.0 11 41 137 167 132 174 0.86 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 UvrD-helicase PF00580.16 315 0.0012 12.0 0.8 2 2 0.0048 0.47 3.5 0.8 170 265 247 350 180 358 0.50 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_43 - 102 HTH_34 PF13601.1 80 0.00024 15.0 0.1 1 1 9.8e-06 0.00097 13.1 0.1 6 78 25 92 21 93 0.80 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 10_1 - 60 HTH_34 PF13601.1 80 0.00099 13.0 0.0 1 1 1.2e-05 0.0012 12.8 0.0 2 42 18 60 17 60 0.88 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 3_17 - 101 MarR PF01047.17 59 0.0001 15.9 0.0 1 1 2.9e-06 0.00019 15.0 0.0 9 37 33 61 32 63 0.93 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_43 - 102 MarR PF01047.17 59 0.00052 13.6 0.0 1 1 1.2e-05 0.00081 13.0 0.0 15 44 31 60 19 60 0.79 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 10_1 - 60 MarR PF01047.17 59 0.0018 11.9 0.0 1 1 3.6e-05 0.0024 11.5 0.0 15 45 30 60 19 60 0.94 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_43 - 102 HTH_Tnp_4 PF13613.1 53 0.00017 15.0 0.0 1 1 1.3e-06 0.00025 14.4 0.0 18 47 32 61 31 67 0.89 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_85 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 1 2 0.0051 1 0.4 32.3 377 534 86 242 42 246 0.65 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 DUF3584 PF12128.3 1201 0.033 5.3 51.1 2 2 2e-05 0.004 8.3 20.6 613 709 225 327 220 345 0.80 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_65 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 1 2 4.4e-14 8.8e-12 39.3 0.1 1 201 101 303 101 305 0.75 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 Pyr_redox_3 PF13738.1 203 2.5e-17 57.4 0.1 2 2 9e-07 0.00018 15.5 0.0 93 147 320 375 309 430 0.76 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 1 2 5.4e-05 0.011 9.9 0.2 9 38 99 128 96 184 0.89 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_7 PF13241.1 103 6.7e-07 23.4 1.2 2 2 1.4e-05 0.0028 11.8 0.1 8 41 270 306 264 380 0.74 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 DUF853 PF05872.7 504 1.7e-06 20.5 0.0 1 1 1.4e-08 2.7e-06 19.8 0.0 7 60 158 211 153 225 0.93 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_40 - 226 TetR_N PF00440.18 47 7e-20 64.4 0.1 1 2 1.4e-20 1.4e-18 60.2 0.0 2 47 19 64 18 64 0.97 # 29790 # 30467 # -1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 2_40 - 226 TetR_N PF00440.18 47 7e-20 64.4 0.1 2 2 0.025 2.5 1.8 0.1 1 16 179 194 179 196 0.91 # 29790 # 30467 # -1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_58 - 505 TetR_N PF00440.18 47 0.00036 14.1 0.0 1 1 7.8e-06 0.00077 13.0 0.0 15 40 14 39 14 40 0.91 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_87 - 504 AAA_19 PF13245.1 76 3.1e-09 30.4 0.0 1 1 1.3e-10 8.3e-09 29.0 0.0 8 75 18 77 12 78 0.88 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_19 PF13245.1 76 7.4e-07 22.8 0.0 1 1 2.9e-08 1.9e-06 21.4 0.0 11 37 101 126 95 147 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_19 PF13245.1 76 0.0003 14.4 0.1 1 1 1.1e-05 0.00069 13.3 0.1 10 35 61 86 51 112 0.76 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_34 - 262 CbiA PF01656.18 195 2.3e-30 99.3 0.0 1 1 3e-32 3e-30 98.9 0.0 1 170 5 205 5 229 0.77 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_2 - 504 CbiA PF01656.18 195 0.00043 13.6 0.0 1 1 7.8e-06 0.00077 12.8 0.0 3 63 143 231 142 282 0.59 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_57 - 262 KTI12 PF08433.5 270 0.00035 13.7 0.4 1 2 6.4e-05 0.013 8.6 0.0 4 81 102 172 101 174 0.68 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 KTI12 PF08433.5 270 0.00035 13.7 0.4 2 2 0.0037 0.73 2.8 0.1 34 59 232 257 212 261 0.77 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 5_3 - 372 tRNA_Me_trans PF03054.11 356 7.5e-05 15.2 0.0 1 2 1.1e-06 0.00023 13.6 0.0 2 71 52 122 51 144 0.74 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 tRNA_Me_trans PF03054.11 356 7.5e-05 15.2 0.0 2 2 0.042 8.2 -1.4 0.0 193 224 274 305 236 311 0.83 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_58 - 505 Sigma70_r4_2 PF08281.7 54 1.1e-05 18.8 0.1 1 1 3.5e-07 3.4e-05 17.2 0.0 23 48 12 37 9 38 0.91 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_33 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 1 2 0.055 5.4 0.5 0.0 22 38 115 131 103 131 0.76 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_33 - 394 Sigma70_r4_2 PF08281.7 54 0.00012 15.4 0.0 2 2 3.5e-06 0.00035 13.9 0.0 17 48 127 158 122 161 0.91 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 5_6 - 355 Rep_3 PF01051.16 222 2.3e-07 24.5 0.0 1 1 2.8e-09 5.5e-07 23.2 0.0 43 221 127 310 101 311 0.83 # 4150 # 5214 # -1 # ID=5_6;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_61 - 560 rve PF00665.21 120 3.5e-26 85.6 0.0 1 1 1.3e-27 6.5e-26 84.7 0.0 2 120 173 313 172 313 0.95 # 52189 # 53868 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_59 - 515 rve PF00665.21 120 5.1e-20 65.7 0.0 1 1 3.7e-21 1.8e-19 63.9 0.0 2 119 347 462 346 463 0.97 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_58 - 505 rve PF00665.21 120 3.2e-15 50.2 0.2 1 1 1.3e-16 6.3e-15 49.2 0.2 4 119 127 253 125 254 0.95 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 9_1 - 235 rve PF00665.21 120 6.5e-13 42.7 0.1 1 2 0.059 2.9 1.9 0.0 78 102 27 49 6 54 0.84 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 9_1 - 235 rve PF00665.21 120 6.5e-13 42.7 0.1 2 2 2.4e-13 1.2e-11 38.7 0.0 9 119 75 182 70 183 0.89 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_17 - 101 Fe_dep_repress PF01325.14 60 0.00026 14.8 0.1 1 1 3e-06 0.00059 13.7 0.1 23 42 42 61 23 63 0.84 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 262 MCM PF00493.18 331 0.0004 13.1 0.0 1 2 7.5e-06 0.0015 11.2 0.0 56 120 98 162 82 172 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 MCM PF00493.18 331 0.0004 13.1 0.0 2 2 0.034 6.8 -0.8 0.0 161 211 190 237 186 259 0.71 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_82 - 290 TIGR00573 TIGR00573 217 4.4e-16 52.5 0.0 1 1 3.6e-18 7.1e-16 51.9 0.0 10 180 107 275 101 288 0.76 # 69992 # 70861 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_87 - 504 AAA_30 PF13604.1 196 9.7e-08 25.7 0.1 1 2 1.8e-06 0.00018 15.0 0.0 19 80 20 81 11 109 0.77 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_30 PF13604.1 196 9.7e-08 25.7 0.1 2 2 0.00035 0.034 7.5 0.0 115 133 211 229 174 278 0.75 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_30 PF13604.1 196 0.00093 12.7 0.2 1 1 2.8e-05 0.0027 11.1 0.1 16 49 97 131 87 162 0.73 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_65 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 1 2 0.0023 0.46 4.9 1.2 2 31 100 126 99 131 0.87 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 F420_oxidored PF03807.12 96 0.014 9.7 4.1 2 2 0.0075 1.5 3.3 0.1 1 34 271 300 271 323 0.87 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_59 - 515 HTH_Tnp_1 PF01527.15 76 4e-20 65.5 5.0 1 3 2.1e-06 0.0002 15.2 0.0 7 48 2 44 1 52 0.91 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_Tnp_1 PF01527.15 76 4e-20 65.5 5.0 2 3 6.8e-12 6.8e-10 32.7 0.2 3 71 56 126 54 131 0.80 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_Tnp_1 PF01527.15 76 4e-20 65.5 5.0 3 3 1.5e-07 1.5e-05 18.8 0.4 12 75 124 203 120 203 0.76 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 9_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00049 13.9 0.3 1 1 1.1e-05 0.0011 12.9 0.3 4 51 6 58 4 63 0.79 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 5_3 - 372 TIGR02432 TIGR02432 189 8e-05 16.2 0.1 1 2 1.1e-05 0.0021 11.5 0.0 1 58 52 109 52 119 0.85 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 TIGR02432 TIGR02432 189 8e-05 16.2 0.1 2 2 0.0084 1.7 2.1 0.0 140 165 235 260 207 262 0.76 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_14 - 622 TraG-D_C PF12696.2 128 5.6e-15 49.2 0.0 1 1 1e-16 1e-14 48.4 0.0 1 124 471 595 471 599 0.83 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 TraG-D_C PF12696.2 128 9.6e-07 22.6 0.0 1 1 2.1e-08 2.1e-06 21.5 0.0 17 75 362 416 344 422 0.84 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 9_1 - 235 DDE_3 PF13358.1 146 0.0014 12.3 0.0 1 1 2.1e-05 0.0041 10.7 0.0 32 90 82 141 59 146 0.87 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_57 - 262 Bac_DnaA PF00308.13 219 2.5e-10 34.2 0.0 1 1 2.1e-12 4.1e-10 33.5 0.0 36 136 101 199 80 221 0.87 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_34 - 262 MipZ PF09140.6 261 3.6e-10 33.2 0.0 1 2 6.6e-10 1.3e-07 24.8 0.0 2 52 4 55 3 81 0.83 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 262 MipZ PF09140.6 261 3.6e-10 33.2 0.0 2 2 0.00031 0.062 6.2 0.0 89 122 117 150 89 166 0.74 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 7_1 - 319 DDE_Tnp_1 PF01609.16 213 2.6e-24 79.8 0.1 1 1 1e-25 6.9e-24 78.4 0.0 6 169 128 310 123 318 0.92 # 188 # 1144 # 1 # ID=7_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 13_1 - 82 DDE_Tnp_1 PF01609.16 213 9.1e-09 29.0 0.0 1 1 1.4e-10 9.2e-09 29.0 0.0 150 211 6 82 1 82 0.80 # 2 # 247 # -1 # ID=13_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 4_9 - 98 DDE_Tnp_1 PF01609.16 213 6.4e-07 22.9 0.0 1 1 1.3e-08 8.6e-07 22.5 0.0 170 213 1 44 1 44 0.98 # 10195 # 10488 # -1 # ID=4_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.371 2_3 - 439 DivIC PF04977.10 80 0.00048 13.5 5.4 1 2 0.00039 0.078 6.4 0.9 26 55 63 92 48 100 0.74 # 1196 # 2512 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 2_3 - 439 DivIC PF04977.10 80 0.00048 13.5 5.4 2 2 6.6e-05 0.013 8.9 0.3 21 48 103 130 94 132 0.89 # 1196 # 2512 # -1 # ID=2_3;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.525 3_17 - 101 Sigma70_r4 PF04545.11 50 0.00025 14.2 0.0 1 1 2.2e-06 0.00043 13.5 0.0 15 42 36 63 35 67 0.88 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_57 - 262 AAA PF00004.24 132 2.1e-07 25.1 0.0 1 1 3.5e-09 3.5e-07 24.4 0.0 1 111 102 202 102 230 0.70 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA PF00004.24 132 0.00067 13.7 0.1 1 1 1.5e-05 0.0015 12.6 0.1 2 33 65 96 64 149 0.83 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_33 - 394 KorB PF08535.5 93 1.7e-31 102.2 0.2 1 1 3e-33 5.9e-31 100.4 0.0 1 92 134 222 134 223 0.97 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 3_17 - 101 HTH_37 PF13744.1 80 2e-11 37.4 0.3 1 1 2.4e-13 2.3e-11 37.3 0.3 8 79 11 88 4 89 0.88 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_43 - 102 HTH_37 PF13744.1 80 0.00067 13.4 0.0 1 1 1e-05 0.00099 12.8 0.0 20 50 22 52 13 60 0.85 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_9 - 221 LexA_DNA_bind PF01726.11 65 0.00088 12.7 0.0 1 1 8.2e-06 0.0016 11.9 0.0 39 62 124 147 118 149 0.87 # 5160 # 5822 # -1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.481 2_32 - 91 Rrf2 PF02082.15 83 0.0011 13.0 0.4 1 1 1.1e-05 0.0022 12.0 0.4 1 52 1 49 1 74 0.86 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_32 - 91 HTH_43 PF09904.4 90 8.2e-12 38.7 0.0 1 1 4.7e-14 9.2e-12 38.6 0.0 2 77 2 81 1 89 0.87 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_18 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 1 2 1.1e-07 1e-05 18.8 4.7 3 37 636 669 634 671 0.90 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_18 - 731 zf-C4_Topoisom PF01396.14 39 1.6e-14 47.0 16.8 2 2 3.1e-12 3e-10 33.4 4.2 3 38 684 725 683 726 0.89 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 6_2 - 400 zf-C4_Topoisom PF01396.14 39 0.024 8.1 9.2 1 3 0.0004 0.04 7.4 0.3 22 36 53 66 43 69 0.86 # 318 # 1517 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563 6_2 - 400 zf-C4_Topoisom PF01396.14 39 0.024 8.1 9.2 2 3 0.0082 0.81 3.2 0.5 2 10 73 81 72 82 0.83 # 318 # 1517 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563 6_2 - 400 zf-C4_Topoisom PF01396.14 39 0.024 8.1 9.2 3 3 0.044 4.3 0.9 0.2 3 15 362 374 361 379 0.86 # 318 # 1517 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563 2_32 - 91 HTH_27 PF13463.1 68 0.00099 13.3 0.0 1 1 6.4e-06 0.0013 13.0 0.0 8 44 13 48 9 76 0.78 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_41 - 400 TIGR01394 TIGR01394 594 0.003 9.3 0.0 1 1 2.2e-05 0.0043 8.8 0.0 408 486 267 343 261 354 0.84 # 30546 # 31745 # 1 # ID=2_41;partial=00;start_type=GTG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.628 1_24 - 295 N6_N4_Mtase PF01555.13 231 7.9e-09 29.2 0.1 1 2 1.7e-06 0.00034 14.0 0.0 180 223 28 72 4 76 0.84 # 21390 # 22274 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_24 - 295 N6_N4_Mtase PF01555.13 231 7.9e-09 29.2 0.1 2 2 3.5e-06 0.0007 13.0 0.1 2 172 90 267 89 283 0.72 # 21390 # 22274 # 1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.510 2_20 - 93 Ribosomal_L2_C PF03947.13 130 0.00099 12.8 0.0 1 1 6.3e-06 0.0012 12.5 0.0 74 111 44 80 24 82 0.86 # 16466 # 16744 # -1 # ID=2_20;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.441 1_59 - 515 rve_2 PF13333.1 52 9.7e-16 51.5 0.6 1 1 2.2e-17 4.3e-15 49.5 0.0 1 49 453 507 453 509 0.91 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_43 - 102 P22_Cro PF14549.1 60 0.0012 12.4 0.1 1 1 1.2e-05 0.0024 11.5 0.1 12 28 36 52 29 57 0.86 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_69 - 145 MerR_1 PF13411.1 69 1.8e-19 63.2 0.0 1 1 6e-21 3e-19 62.5 0.0 2 67 9 75 8 77 0.96 # 58175 # 58609 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_64 - 121 MerR_1 PF13411.1 69 1.1e-13 44.7 0.0 1 1 3.5e-15 1.7e-13 44.0 0.0 1 68 4 72 4 73 0.97 # 54880 # 55242 # -1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_58 - 505 MerR_1 PF13411.1 69 0.00021 15.0 0.0 1 1 1.1e-05 0.00054 13.6 0.0 2 30 17 45 16 51 0.90 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_59 - 515 MerR_1 PF13411.1 69 0.00031 14.4 1.0 1 1 7.7e-05 0.0038 10.9 0.0 3 56 138 195 137 207 0.85 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_2 - 504 AAA_16 PF13191.1 185 2.4e-05 18.3 0.3 1 1 3.7e-06 0.00015 15.7 0.3 20 63 135 178 127 347 0.60 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_60 - 287 AAA_16 PF13191.1 185 2.7e-05 18.1 0.0 1 2 3.9e-05 0.0015 12.3 0.0 8 52 45 94 43 146 0.70 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_60 - 287 AAA_16 PF13191.1 185 2.7e-05 18.1 0.0 2 2 0.019 0.77 3.6 0.0 139 183 134 184 114 186 0.72 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_14 - 323 AAA_16 PF13191.1 185 4.7e-05 17.3 0.8 1 1 3.6e-06 0.00014 15.7 0.0 7 48 47 85 42 102 0.79 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_21 - 206 AAA_16 PF13191.1 185 8.3e-05 16.5 0.1 1 1 3.2e-06 0.00013 15.9 0.1 27 68 11 54 3 168 0.79 # 16977 # 17594 # -1 # ID=2_21;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.516 1_57 - 262 AAA_16 PF13191.1 185 0.00028 14.7 0.1 1 1 1.7e-05 0.00068 13.5 0.1 23 51 98 126 84 166 0.79 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_60 - 287 AAA_22 PF13401.1 131 7.5e-17 55.6 0.0 1 1 4e-18 1.3e-16 54.8 0.0 7 126 64 190 59 194 0.94 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_57 - 262 AAA_22 PF13401.1 131 5.5e-06 20.5 0.1 1 2 1.7e-05 0.00055 14.0 0.2 2 28 97 123 96 159 0.74 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 AAA_22 PF13401.1 131 5.5e-06 20.5 0.1 2 2 0.012 0.41 4.7 0.0 87 117 151 196 132 204 0.62 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 1 2 0.00016 0.0053 10.8 0.0 8 68 23 92 17 122 0.63 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_22 PF13401.1 131 6.4e-05 17.0 0.0 2 2 0.03 0.98 3.4 0.0 82 124 189 225 164 229 0.77 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_14 - 323 AAA_22 PF13401.1 131 0.00024 15.1 0.0 1 1 1.6e-05 0.00051 14.1 0.0 5 54 62 103 56 164 0.76 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_14 - 622 AAA_22 PF13401.1 131 0.00025 15.1 0.0 1 1 2.5e-05 0.00082 13.4 0.0 3 68 171 231 166 287 0.83 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 AAA_22 PF13401.1 131 0.0007 13.6 0.1 1 2 0.0012 0.039 8.0 0.0 5 27 140 162 135 199 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 AAA_22 PF13401.1 131 0.0007 13.6 0.1 2 2 0.047 1.5 2.8 0.1 88 99 339 354 265 410 0.77 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_64 - 121 DUF977 PF06163.6 127 0.00059 13.5 0.1 1 1 5.9e-06 0.0012 12.5 0.0 27 70 4 47 2 65 0.90 # 54880 # 55242 # -1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_57 - 262 TIGR00362 TIGR00362 437 8.9e-13 41.5 0.0 1 1 7.2e-15 1.4e-12 40.9 0.0 138 240 100 200 77 220 0.90 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 TIGR01074 TIGR01074 668 2.5e-10 32.7 0.8 1 3 0.0039 0.76 1.4 0.0 8 33 12 38 7 57 0.74 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 TIGR01074 TIGR01074 668 2.5e-10 32.7 0.8 2 3 4.1e-07 8.1e-05 14.5 0.0 205 254 192 238 179 271 0.87 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 TIGR01074 TIGR01074 668 2.5e-10 32.7 0.8 3 3 7.5e-07 0.00015 13.6 0.1 534 614 396 472 347 493 0.80 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_43 - 102 NUMOD1 PF07453.8 37 0.00047 13.9 0.0 1 1 9.6e-06 0.00095 12.9 0.0 20 35 37 52 30 54 0.91 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_51 - 186 NUMOD1 PF07453.8 37 0.0026 11.5 0.0 1 1 5.1e-05 0.0051 10.6 0.0 20 37 165 182 164 182 0.90 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_32 - 91 HTH_9 PF08221.6 62 0.00054 13.7 0.0 1 1 4.4e-06 0.00088 13.0 0.0 19 51 14 46 11 47 0.90 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_57 - 262 AAA_29 PF13555.1 62 2.7e-05 17.5 0.0 1 1 5.6e-07 5.6e-05 16.5 0.0 5 47 80 125 78 136 0.83 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_29 PF13555.1 62 0.0024 11.3 1.0 1 1 5.4e-05 0.0053 10.2 0.3 21 38 59 76 54 79 0.86 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_65 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 1 2 1.4e-06 0.00028 15.2 1.5 1 31 99 129 99 131 0.96 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 Pyr_redox PF00070.22 80 7.1e-20 65.1 6.0 2 2 6.2e-18 1.2e-15 51.6 0.2 1 74 271 345 271 354 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_43 - 102 HTH_1 PF00126.22 60 2.8e-24 78.6 0.7 1 1 3.8e-26 3.7e-24 78.2 0.7 4 60 24 80 21 80 0.96 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 2_32 - 91 HTH_1 PF00126.22 60 7.1e-05 16.4 0.0 1 1 1.1e-06 0.00011 15.8 0.0 22 51 31 61 30 76 0.79 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_58 - 505 HTH_Tnp_Tc3_1 PF11427.3 50 0.0012 12.3 0.1 1 1 1.6e-05 0.0033 11.0 0.1 20 42 15 37 11 41 0.91 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_57 - 262 AAA_28 PF13521.1 163 1.8e-05 18.6 1.1 1 1 4.6e-07 9.1e-05 16.3 0.8 1 24 101 124 101 239 0.90 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_65 - 565 HI0933_like PF03486.9 409 4.4e-08 25.8 3.7 1 2 2.4e-06 0.00024 13.5 2.5 2 33 99 130 98 138 0.91 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 HI0933_like PF03486.9 409 4.4e-08 25.8 3.7 2 2 1.4e-05 0.0014 10.9 0.0 82 164 284 366 276 385 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_1 - 98 HI0933_like PF03486.9 409 0.00053 12.4 0.0 1 1 6.6e-06 0.00066 12.0 0.0 354 393 40 79 34 83 0.91 # 2 # 295 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.510 9_1 - 235 HTH_32 PF13565.1 77 2.6e-06 22.1 0.2 1 1 5.6e-08 1.1e-05 20.0 0.0 26 76 5 50 2 51 0.83 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_87 - 504 TIGR00609 TIGR00609 1175 8.4e-12 37.5 1.1 1 4 0.0098 1.9 -0.2 0.0 13 27 23 37 13 47 0.82 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 TIGR00609 TIGR00609 1175 8.4e-12 37.5 1.1 2 4 1.4e-10 2.8e-08 25.8 0.0 368 454 190 270 179 282 0.80 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 TIGR00609 TIGR00609 1175 8.4e-12 37.5 1.1 3 4 0.011 2.1 -0.3 0.0 728 746 412 430 401 437 0.88 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 TIGR00609 TIGR00609 1175 8.4e-12 37.5 1.1 4 4 7.4e-05 0.015 6.8 0.1 789 818 446 475 417 502 0.70 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_46 - 498 A2L_zn_ribbon PF08792.5 33 0.016 8.6 3.6 1 2 0.004 0.8 3.2 0.5 5 29 75 100 73 101 0.85 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_46 - 498 A2L_zn_ribbon PF08792.5 33 0.016 8.6 3.6 2 2 0.00068 0.13 5.7 0.1 2 13 439 450 439 453 0.85 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 3_17 - 101 HTH_3 PF01381.17 55 9e-08 25.8 0.1 1 1 6.6e-10 1.3e-07 25.3 0.1 1 44 33 76 33 84 0.86 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 7_1 - 319 DDE_Tnp_1_4 PF13701.1 449 7.1e-15 47.9 0.4 1 1 1.3e-15 8.3e-14 44.4 0.4 137 265 122 251 3 286 0.82 # 188 # 1144 # 1 # ID=7_1;partial=01;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.331 4_9 - 98 DDE_Tnp_1_4 PF13701.1 449 3.9e-09 29.0 0.3 1 1 6.6e-11 4.4e-09 28.8 0.3 339 418 1 80 1 90 0.95 # 10195 # 10488 # -1 # ID=4_9;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.371 13_1 - 82 DDE_Tnp_1_4 PF13701.1 449 6.1e-05 15.1 0.0 1 1 9.3e-07 6.1e-05 15.1 0.0 338 370 40 72 14 82 0.79 # 2 # 247 # -1 # ID=13_1;partial=11;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.362 1_59 - 515 HTH_23 PF13384.1 50 9.1e-10 31.9 1.7 1 2 0.0057 0.13 6.0 0.1 2 30 2 31 1 45 0.90 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_23 PF13384.1 50 9.1e-10 31.9 1.7 2 2 2.1e-08 4.6e-07 23.3 0.1 5 41 123 159 119 166 0.76 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_58 - 505 HTH_23 PF13384.1 50 7.5e-07 22.6 0.5 1 1 1.1e-07 2.4e-06 21.0 0.5 14 39 12 37 2 39 0.87 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_61 - 560 HTH_23 PF13384.1 50 8e-07 22.5 0.9 1 1 1.4e-07 3.1e-06 20.6 0.9 3 45 23 71 21 76 0.87 # 52189 # 53868 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 9_1 - 235 HTH_23 PF13384.1 50 1.2e-05 18.8 0.7 1 1 1.7e-05 0.00037 14.0 0.1 28 42 41 55 40 62 0.87 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 2_48 - 246 HTH_23 PF13384.1 50 2.4e-05 17.8 0.4 1 1 1.1e-06 2.4e-05 17.8 0.4 2 37 171 206 170 216 0.90 # 36616 # 37353 # -1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 2_33 - 394 HTH_23 PF13384.1 50 0.00025 14.6 0.2 1 1 7.8e-05 0.0017 11.9 0.0 4 35 122 154 119 161 0.81 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_43 - 102 HTH_23 PF13384.1 50 0.00074 13.1 0.0 1 1 6.8e-05 0.0015 12.1 0.0 15 40 31 56 25 65 0.79 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_51 - 186 HTH_23 PF13384.1 50 0.00079 13.0 1.2 1 1 6.4e-05 0.0014 12.2 0.0 10 39 154 183 149 184 0.80 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_40 - 226 HTH_23 PF13384.1 50 0.0018 11.9 0.2 1 1 0.00043 0.0096 9.5 0.0 10 35 22 51 14 64 0.75 # 29790 # 30467 # -1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_51 - 186 HTH_7 PF02796.10 45 8.6e-14 45.1 0.1 1 1 2.7e-15 1.8e-13 44.1 0.1 1 44 141 184 141 185 0.98 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 2_48 - 246 HTH_7 PF02796.10 45 1.6e-07 25.0 0.1 1 1 5.7e-09 3.7e-07 23.8 0.1 8 44 173 209 168 210 0.87 # 36616 # 37353 # -1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_58 - 505 HTH_7 PF02796.10 45 9.6e-06 19.3 0.1 1 1 3.4e-07 2.3e-05 18.1 0.1 20 43 14 37 12 39 0.92 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_46 - 498 Ribosomal_S27e PF01667.12 55 0.001 12.5 1.1 1 1 1.4e-05 0.0028 11.1 1.1 5 33 71 99 68 104 0.90 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 3_17 - 101 HTH_19 PF12844.2 64 7.2e-08 26.3 0.0 1 1 5.2e-10 1e-07 25.8 0.0 4 52 33 81 31 86 0.95 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_46 - 498 zinc_ribbon_4 PF13717.1 36 0.045 7.4 5.2 1 2 0.00049 0.097 6.3 0.1 2 14 73 85 73 87 0.84 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_46 - 498 zinc_ribbon_4 PF13717.1 36 0.045 7.4 5.2 2 2 0.0064 1.3 2.8 0.0 5 14 95 104 94 111 0.81 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_57 - 262 Mg_chelatase PF01078.16 207 0.001 12.1 0.0 1 1 1.1e-05 0.0021 11.1 0.0 23 43 100 120 96 153 0.86 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_59 - 515 HTH_29 PF13551.1 112 5.3e-07 23.7 8.9 1 2 0.002 0.13 6.3 1.0 6 90 13 98 7 119 0.68 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_29 PF13551.1 112 5.3e-07 23.7 8.9 2 2 5.6e-08 3.7e-06 21.0 0.1 3 97 126 218 124 221 0.77 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_61 - 560 HTH_29 PF13551.1 112 6.8e-06 20.1 0.3 1 1 1e-07 6.8e-06 20.1 0.3 13 77 39 109 27 132 0.79 # 52189 # 53868 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_58 - 505 HTH_29 PF13551.1 112 0.00065 13.7 0.0 1 1 2.8e-05 0.0018 12.3 0.0 9 34 13 37 9 66 0.92 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 565 Glyco_trans_4_4 PF13579.1 160 0.00039 14.5 1.7 1 1 4.2e-06 0.00084 13.4 0.1 2 26 276 306 276 340 0.70 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 1 3 0.0081 1.6 2.3 0.1 1 41 101 135 101 162 0.81 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 2 3 0.034 6.6 0.3 0.0 134 155 218 241 202 242 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_9 PF13454.1 156 5.6e-05 16.8 2.8 3 3 6.6e-06 0.0013 12.4 0.1 112 155 321 366 311 367 0.85 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 1 3 3.5e-10 6.8e-08 25.5 3.3 2 187 100 279 99 302 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 2 3 0.038 7.5 -0.9 0.0 3 31 273 301 271 315 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 GIDA PF01134.17 392 5.1e-08 26.0 6.6 3 3 0.018 3.6 0.1 0.1 349 385 393 429 387 433 0.77 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_82 - 290 DNA_pol_A_exo1 PF01612.15 176 0.00038 13.8 0.2 1 1 1.3e-05 0.0027 11.1 0.2 9 96 93 202 85 272 0.75 # 69992 # 70861 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_65 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 1 2 3.5e-07 6.9e-05 16.7 1.2 1 35 102 135 102 155 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 NAD_binding_8 PF13450.1 68 6.9e-05 16.7 1.2 2 2 0.041 8.1 0.5 0.2 1 25 274 298 274 303 0.81 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 9_1 - 235 DDE_Tnp_IS66 PF03050.9 271 4.6e-12 39.5 0.3 1 1 3e-14 5.9e-12 39.2 0.3 5 132 10 144 6 174 0.87 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_14 - 323 Arch_ATPase PF01637.13 234 8.3e-05 16.2 0.0 1 1 7e-07 0.00014 15.5 0.0 4 44 45 85 43 94 0.91 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 PhoH PF02562.11 205 2.5e-08 27.2 0.1 1 1 5.9e-10 5.8e-08 26.0 0.1 3 61 83 142 81 179 0.77 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 PhoH PF02562.11 205 5.1e-06 19.7 0.2 1 2 0.0026 0.26 4.3 0.0 22 45 22 45 4 61 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 PhoH PF02562.11 205 5.1e-06 19.7 0.2 2 2 1.5e-05 0.0015 11.7 0.0 122 168 196 240 193 255 0.83 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_14 - 323 AAA_5 PF07728.9 139 2e-18 60.4 0.0 1 1 3.2e-20 3.1e-18 59.7 0.0 2 125 64 188 63 197 0.94 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_5 PF07728.9 139 0.00038 14.1 0.2 1 1 8.6e-06 0.00085 12.9 0.2 1 19 101 119 101 243 0.78 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 ResIII PF04851.10 184 2.1e-06 21.5 0.0 1 1 8.3e-08 5.5e-06 20.2 0.0 23 75 17 69 7 107 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_14 - 622 ResIII PF04851.10 184 0.00021 15.0 0.0 1 1 6.4e-06 0.00042 14.0 0.0 23 57 170 206 129 214 0.74 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 ResIII PF04851.10 184 0.001 12.8 0.1 1 2 0.00035 0.023 8.3 0.0 20 52 135 168 99 220 0.79 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 ResIII PF04851.10 184 0.001 12.8 0.1 2 2 0.031 2 2.0 0.1 137 155 316 350 230 382 0.59 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 5_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 1 2 0.028 2.8 1.6 0.0 2 17 53 68 52 91 0.76 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 PAPS_reduct PF01507.14 174 7e-12 39.4 0.4 2 2 8.8e-13 8.7e-11 35.8 0.1 58 172 154 279 145 281 0.85 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_37 - 818 PAPS_reduct PF01507.14 174 5e-05 17.0 0.0 1 1 2.1e-06 0.0002 15.0 0.0 3 151 69 256 67 261 0.69 # 28854 # 31307 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.522 2_14 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 1 2 8.9e-13 8.8e-11 34.8 0.0 10 54 167 211 161 314 0.70 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 TrwB_AAD_bind PF10412.4 386 3.9e-19 62.3 0.0 2 2 6.9e-10 6.9e-08 25.3 0.0 242 377 469 609 445 616 0.82 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 TrwB_AAD_bind PF10412.4 386 1.2e-08 27.8 0.0 1 2 7.5e-06 0.00074 12.0 0.0 6 72 130 205 126 209 0.85 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 TrwB_AAD_bind PF10412.4 386 1.2e-08 27.8 0.0 2 2 2.7e-06 0.00027 13.5 0.1 230 302 329 401 296 419 0.67 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_34 - 262 TIGR01968 TIGR01968 261 1e-08 28.4 0.1 1 2 5e-07 0.0001 15.3 0.1 2 39 3 41 2 45 0.84 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 262 TIGR01968 TIGR01968 261 1e-08 28.4 0.1 2 2 9e-06 0.0018 11.2 0.0 105 135 120 150 111 218 0.80 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 1_60 - 287 AAA_32 PF13654.1 509 0.00027 13.5 0.1 1 2 6.6e-06 0.0013 11.3 0.0 8 81 34 112 26 124 0.86 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_60 - 287 AAA_32 PF13654.1 509 0.00027 13.5 0.1 2 2 0.02 4.1 -0.3 0.1 472 502 255 285 242 286 0.89 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_46 - 576 zf-CHC2 PF01807.15 98 0.0012 12.3 0.0 1 1 1.2e-05 0.0024 11.3 0.0 35 94 40 101 30 105 0.75 # 35463 # 37190 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_50 - 991 Glycos_transf_1 PF00534.15 172 0.00028 14.2 0.0 1 1 2.8e-06 0.00056 13.2 0.0 31 118 280 373 276 374 0.90 # 39015 # 41987 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.605 1_60 - 287 TniB PF05621.6 302 6.8e-201 659.2 5.6 1 1 3.8e-203 7.6e-201 659.0 5.6 1 285 1 285 1 286 1.00 # 51326 # 52186 # -1 # ID=1_60;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_82 - 290 TIGR01406 TIGR01406 231 2.1e-18 60.3 0.0 1 1 1.5e-20 3e-18 59.8 0.0 3 179 107 279 105 288 0.85 # 69992 # 70861 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_14 - 323 AAA_3 PF07726.6 131 0.00014 15.4 0.0 1 1 2.2e-06 0.00022 14.7 0.0 3 114 65 188 63 212 0.80 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_3 PF07726.6 131 0.001 12.6 0.0 1 1 2.4e-05 0.0024 11.4 0.0 2 72 102 171 101 201 0.70 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_14 - 622 DUF87 PF01935.12 229 1.7e-08 28.4 0.0 1 1 4.3e-10 4.3e-08 27.1 0.0 24 63 173 211 168 269 0.87 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 DUF87 PF01935.12 229 3.1e-08 27.5 0.1 1 1 5.8e-10 5.7e-08 26.7 0.1 23 154 139 275 120 351 0.71 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_59 - 515 HTH_28 PF13518.1 52 6.5e-11 36.0 5.0 1 3 0.00012 0.0034 11.3 0.8 1 39 6 46 6 58 0.91 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_28 PF13518.1 52 6.5e-11 36.0 5.0 2 3 0.042 1.2 3.2 0.2 1 36 64 101 64 102 0.86 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_28 PF13518.1 52 6.5e-11 36.0 5.0 3 3 1.2e-07 3.3e-06 20.9 0.0 2 46 124 167 123 174 0.78 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_61 - 560 HTH_28 PF13518.1 52 1.6e-08 28.3 0.1 1 1 2.4e-09 6.8e-08 26.3 0.1 1 46 26 78 26 87 0.76 # 52189 # 53868 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_58 - 505 HTH_28 PF13518.1 52 1.2e-05 19.1 0.4 1 1 1.4e-06 3.9e-05 17.5 0.4 5 34 6 37 3 38 0.82 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 9_1 - 235 HTH_28 PF13518.1 52 0.00012 16.0 1.2 1 1 1.8e-05 0.0005 14.0 1.2 22 36 40 54 13 55 0.76 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_51 - 186 HTH_28 PF13518.1 52 0.00042 14.2 0.1 1 1 4.5e-05 0.0013 12.7 0.0 16 34 165 183 150 184 0.81 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_95 - 82 HTH_28 PF13518.1 52 0.00044 14.2 1.0 1 1 8.6e-05 0.0024 11.8 0.2 18 49 28 58 15 63 0.85 # 84302 # 84547 # 1 # ID=1_95;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.508 2_48 - 246 HTH_28 PF13518.1 52 0.00062 13.7 0.7 1 1 2.2e-05 0.00062 13.7 0.7 1 33 175 207 175 209 0.95 # 36616 # 37353 # -1 # ID=2_48;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.675 1_57 - 262 DnaB_C PF03796.10 259 0.0003 13.6 0.0 1 1 2.4e-06 0.00048 12.9 0.0 16 55 96 135 85 158 0.90 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 2_40 - 226 HTH_Tnp_1_2 PF13022.1 142 0.0016 12.1 0.0 1 1 1.2e-05 0.0023 11.6 0.0 22 77 24 73 5 79 0.76 # 29790 # 30467 # -1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 1_69 - 145 MerR-DNA-bind PF09278.6 65 4.2e-21 69.1 0.6 1 1 9.7e-23 9.6e-21 67.9 0.5 1 65 51 113 51 113 0.95 # 58175 # 58609 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_64 - 121 MerR-DNA-bind PF09278.6 65 0.0016 12.8 7.4 1 1 2.5e-05 0.0025 12.1 7.4 1 64 47 108 47 109 0.85 # 54880 # 55242 # -1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_58 - 505 HTH_24 PF13412.1 48 6.4e-07 22.6 0.1 1 1 5.2e-08 2.1e-06 21.0 0.1 7 39 2 37 1 39 0.90 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_43 - 102 HTH_24 PF13412.1 48 1.7e-06 21.3 0.0 1 1 6.2e-08 2.5e-06 20.7 0.0 16 44 32 60 22 60 0.86 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 10_1 - 60 HTH_24 PF13412.1 48 2.5e-05 17.5 0.0 1 1 9.9e-07 3.9e-05 16.9 0.0 4 45 17 60 15 60 0.93 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_32 - 91 HTH_24 PF13412.1 48 3.5e-05 17.0 0.1 1 1 1.4e-06 5.4e-05 16.4 0.1 5 44 10 49 7 49 0.93 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 2_33 - 394 HTH_24 PF13412.1 48 3.8e-05 16.9 0.3 1 2 0.0008 0.032 7.6 0.2 1 29 104 131 104 131 0.90 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 2_33 - 394 HTH_24 PF13412.1 48 3.8e-05 16.9 0.3 2 2 0.0012 0.047 7.0 0.0 20 41 139 160 138 161 0.90 # 23933 # 25114 # -1 # ID=2_33;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.501 1_57 - 262 Sigma54_activ_2 PF14532.1 138 0.00059 13.8 0.1 1 1 7.7e-06 0.0015 12.4 0.0 3 44 79 122 77 151 0.81 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 1 3 0.0021 0.41 3.9 0.0 3 26 140 163 138 193 0.85 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 2 3 0.005 0.99 2.7 0.1 75 115 284 325 268 390 0.83 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_2 - 504 Guanylate_kin PF00625.16 183 5.6e-05 16.5 0.1 3 3 0.0005 0.099 5.9 0.0 75 131 402 458 378 465 0.87 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_43 - 102 HTH_30 PF13556.1 59 1.3e-05 18.6 0.1 1 1 2e-07 2e-05 18.0 0.1 10 44 31 65 24 75 0.88 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_58 - 505 HTH_30 PF13556.1 59 0.00033 14.1 0.3 1 1 1e-05 0.001 12.6 0.1 7 34 10 37 8 38 0.90 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_82 - 290 TIGR01298 TIGR01298 200 3.6e-07 23.7 1.1 1 1 5.8e-08 1.1e-05 18.8 1.1 1 196 97 276 97 280 0.83 # 69992 # 70861 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_51 - 186 HTH_10 PF04967.7 53 0.0003 14.2 0.1 1 2 0.061 12 -0.5 0.1 3 30 124 152 123 154 0.66 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_51 - 186 HTH_10 PF04967.7 53 0.0003 14.2 0.1 2 2 1.1e-05 0.0022 11.5 0.0 29 45 167 183 156 184 0.92 # 41990 # 42547 # -1 # ID=1_51;partial=00;start_type=TTG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.611 1_65 - 565 TIGR01292 TIGR01292 300 3.3e-19 62.3 2.9 1 2 3.8e-05 0.0076 8.6 1.1 3 39 100 136 98 142 0.89 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 TIGR01292 TIGR01292 300 3.3e-19 62.3 2.9 2 2 1.1e-18 2.1e-16 53.1 0.0 142 296 270 428 213 430 0.81 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 2_14 - 622 DEAD PF00270.24 169 4.6e-05 16.8 0.0 1 1 8.7e-07 8.6e-05 15.9 0.0 13 52 171 208 159 231 0.85 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 DEAD PF00270.24 169 0.00091 12.6 0.4 1 1 4.7e-05 0.0047 10.3 0.3 13 133 138 314 125 373 0.66 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 3_17 - 101 HTH_31 PF13560.1 64 1.9e-07 25.1 0.0 1 1 2.7e-09 2.7e-07 24.6 0.0 5 55 32 81 29 90 0.90 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 1_58 - 505 HTH_31 PF13560.1 64 0.00087 13.4 0.2 1 1 2.2e-05 0.0022 12.1 0.2 12 43 13 44 4 54 0.82 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_87 - 504 UvrD_C_2 PF13538.1 104 1.5e-10 35.0 0.0 1 1 3.5e-12 6.9e-10 32.9 0.0 46 99 393 463 352 467 0.67 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_58 - 505 HTH_36 PF13730.1 55 2.3e-05 18.4 0.0 1 1 2.9e-07 5.8e-05 17.1 0.0 26 47 16 37 2 38 0.88 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_14 - 323 T2SE PF00437.15 272 6.9e-05 15.7 0.0 1 1 1.6e-06 0.00016 14.5 0.0 105 148 40 81 9 100 0.77 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 2_14 - 622 T2SE PF00437.15 272 0.00036 13.3 0.0 1 1 5.9e-06 0.00058 12.6 0.0 116 162 163 206 124 227 0.78 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_61 - 560 HTH_Tnp_Mu_2 PF09039.6 108 2e-05 18.2 0.0 1 1 2.8e-07 5.5e-05 16.8 0.0 37 101 100 163 83 166 0.91 # 52189 # 53868 # -1 # ID=1_61;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.647 1_57 - 262 NACHT PF05729.7 166 0.0024 11.4 2.1 1 2 5.9e-05 0.012 9.2 0.3 3 23 102 122 100 148 0.84 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_57 - 262 NACHT PF05729.7 166 0.0024 11.4 2.1 2 2 0.012 2.3 1.7 0.1 80 127 156 200 139 221 0.76 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_14 - 323 AAA_17 PF13207.1 121 5.1e-05 18.0 0.0 1 1 1.1e-06 0.00011 16.9 0.0 3 27 65 89 64 166 0.90 # 11531 # 12499 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_57 - 262 AAA_17 PF13207.1 121 0.00022 15.9 0.0 1 1 3.1e-06 0.00031 15.4 0.0 2 38 102 133 101 232 0.74 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 1 3 4.3e-08 8.5e-06 18.6 4.7 2 32 100 130 99 137 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 2 3 0.034 6.8 -0.8 0.1 143 204 311 369 297 388 0.72 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 FAD_binding_2 PF00890.19 417 8.5e-06 18.6 4.7 3 3 0.074 15 -1.9 0.0 376 402 388 408 377 424 0.82 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_57 - 262 AAA_25 PF13481.1 194 0.00021 14.6 0.0 1 1 7.2e-06 0.00035 13.8 0.0 29 57 95 123 76 170 0.86 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 AAA_25 PF13481.1 194 0.00033 13.9 0.0 1 1 1.8e-05 0.00087 12.6 0.0 36 86 142 182 135 225 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_34 - 262 AAA_25 PF13481.1 194 0.00077 12.7 0.0 1 1 2.4e-05 0.0012 12.1 0.0 42 91 12 51 11 134 0.78 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_14 - 622 AAA_25 PF13481.1 194 0.00078 12.7 0.0 1 1 4.9e-05 0.0024 11.1 0.0 20 137 159 265 145 272 0.78 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_2 - 504 Zot PF05707.7 193 0.00089 12.6 0.0 1 1 1.7e-05 0.0034 10.7 0.0 79 133 341 391 304 410 0.80 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 1 3 1.4e-05 0.0028 11.0 0.0 2 49 23 73 22 87 0.67 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 2 3 1.8e-05 0.0036 10.7 0.0 56 105 188 234 146 256 0.78 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 Viral_helicase1 PF01443.13 234 1.8e-10 34.6 0.0 3 3 5.2e-05 0.01 9.2 0.0 176 227 404 462 344 467 0.75 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 RuvB_N PF05496.7 234 0.001 12.0 0.0 1 1 7.1e-06 0.0014 11.5 0.0 48 75 97 124 45 170 0.84 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_87 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 1 2 2.5e-05 0.005 10.6 0.1 11 46 28 62 18 156 0.76 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_87 - 504 AAA_14 PF13173.1 128 3.2e-05 17.7 1.3 2 2 0.0011 0.22 5.3 0.0 51 99 176 227 127 241 0.73 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 2_32 - 91 Mga PF05043.8 87 0.0005 14.2 0.1 1 1 3.1e-06 0.00062 13.9 0.1 17 55 9 47 2 62 0.89 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_49 - 335 Transposase_20 PF02371.11 87 2e-24 79.4 0.2 1 1 4.6e-26 4.6e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 37932 # 38936 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 1_70 - 335 Transposase_20 PF02371.11 87 2.2e-24 79.3 0.2 1 1 4.6e-26 4.6e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 58688 # 59692 # 1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_69 - 145 MerR PF00376.18 38 1.6e-13 43.9 0.2 1 1 4.5e-15 3e-13 43.1 0.2 1 38 9 46 9 46 0.99 # 58175 # 58609 # 1 # ID=1_69;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.595 1_64 - 121 MerR PF00376.18 38 2.5e-06 20.9 0.0 1 1 5.9e-08 3.9e-06 20.3 0.0 1 38 5 42 5 42 0.95 # 54880 # 55242 # -1 # ID=1_64;partial=00;start_type=ATG;rbs_motif=AGGAGG;rbs_spacer=5-10bp;gc_cont=0.697 1_58 - 505 MerR PF00376.18 38 0.00024 14.5 0.1 1 1 8.7e-06 0.00058 13.3 0.1 1 28 17 43 17 48 0.85 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_57 - 262 AAA_33 PF13671.1 143 0.00072 13.3 0.2 1 1 1.8e-05 0.0018 12.1 0.2 2 36 102 142 102 255 0.67 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_16 - 176 AAA_33 PF13671.1 143 0.0011 12.7 0.0 1 1 1.7e-05 0.0017 12.1 0.0 26 102 33 104 23 109 0.75 # 13482 # 14009 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 2_14 - 622 ArgK PF03308.11 267 0.00021 13.9 0.0 1 1 1.8e-06 0.00037 13.2 0.0 12 68 158 209 153 214 0.88 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 3_16 - 98 PaaX PF07848.7 70 0.0002 15.2 0.0 1 1 1.4e-06 0.00028 14.8 0.0 19 70 28 79 10 79 0.88 # 8294 # 8587 # 1 # ID=3_16;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.486 2_14 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 1 2 5.2e-07 0.0001 14.8 0.0 37 115 168 249 125 365 0.73 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 2_14 - 622 T4SS-DNA_transf PF02534.9 469 4.8e-05 15.9 0.0 2 2 0.097 19 -2.6 0.0 328 389 494 555 474 572 0.74 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_65 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 1 2 0.00051 0.1 6.0 0.8 15 50 92 127 89 130 0.90 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 AlaDh_PNT_C PF01262.16 168 4.7e-05 16.9 3.1 2 2 2.1e-05 0.0042 10.5 0.1 16 58 265 307 257 339 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_33 - 542 DNA_methylase PF00145.12 335 1.2e-28 94.0 0.0 1 1 6.3e-30 6.2e-28 91.7 0.0 3 333 126 441 124 443 0.77 # 25402 # 27027 # 1 # ID=1_33;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.514 2_23 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 1 2 4.1e-11 4.1e-09 29.8 0.0 71 160 228 320 199 324 0.83 # 18306 # 19733 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 2_23 - 476 DNA_methylase PF00145.12 335 1.2e-10 34.9 0.0 2 2 0.0061 0.61 2.9 0.0 290 330 407 448 341 452 0.73 # 18306 # 19733 # -1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.530 1_65 - 565 3HCDH_N PF02737.13 180 0.0063 10.0 6.4 1 2 0.0047 0.94 2.9 2.4 1 30 99 128 99 134 0.93 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 3HCDH_N PF02737.13 180 0.0063 10.0 6.4 2 2 9e-05 0.018 8.6 0.1 2 39 272 309 271 348 0.73 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 5_3 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 1 2 5.2e-05 0.01 9.2 0.0 1 59 52 110 52 129 0.78 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 ATP_bind_3 PF01171.15 182 0.00029 14.2 0.0 2 2 0.005 1 2.7 0.0 134 161 232 260 207 262 0.72 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 2_46 - 498 zinc_ribbon_5 PF13719.1 37 0.0042 10.6 2.7 1 2 0.00031 0.062 6.8 0.0 2 14 73 85 72 87 0.83 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_46 - 498 zinc_ribbon_5 PF13719.1 37 0.0042 10.6 2.7 2 2 0.0048 0.96 3.0 0.0 5 14 95 104 94 113 0.81 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 5_3 - 372 TIGR00420 TIGR00420 351 0.002 10.5 0.0 1 2 0.00011 0.021 7.2 0.0 2 64 52 110 51 128 0.77 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 5_3 - 372 TIGR00420 TIGR00420 351 0.002 10.5 0.0 2 2 0.0073 1.4 1.1 0.0 192 223 274 305 245 313 0.89 # 1546 # 2661 # 1 # ID=5_3;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.520 1_65 - 565 Glyco_transf_4 PF13439.1 177 1.2e-05 19.0 0.1 1 1 1.3e-07 2.6e-05 17.8 0.1 13 40 276 303 272 356 0.82 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 9_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.5e-52 171.2 0.0 1 1 1.1e-54 2.1e-52 170.7 0.0 4 139 75 212 73 213 0.99 # 53 # 757 # -1 # ID=9_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 3_19 - 183 HTH_26 PF13443.1 63 0.00018 15.6 0.1 1 2 0.0022 0.44 4.7 0.0 9 48 53 91 45 92 0.86 # 9434 # 9982 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 3_19 - 183 HTH_26 PF13443.1 63 0.00018 15.6 0.1 2 2 0.00018 0.036 8.2 0.0 39 56 163 180 155 182 0.92 # 9434 # 9982 # 1 # ID=3_19;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.530 1_59 - 515 HTH_17 PF12728.2 51 8.7e-07 23.0 3.7 1 3 4.5e-05 0.0045 11.2 0.0 4 21 138 155 137 173 0.84 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_17 PF12728.2 51 8.7e-07 23.0 3.7 2 3 0.0015 0.15 6.3 0.2 12 39 301 327 300 329 0.91 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_17 PF12728.2 51 8.7e-07 23.0 3.7 3 3 0.028 2.7 2.2 0.0 22 40 406 426 399 427 0.78 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_58 - 505 HTH_17 PF12728.2 51 0.00086 13.5 0.0 1 1 3.7e-05 0.0036 11.5 0.0 3 25 17 39 17 53 0.90 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_18 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 1 2 0.0093 0.92 3.5 0.1 23 40 631 647 624 648 0.85 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_18 - 731 Zn-ribbon_8 PF09723.5 42 0.013 9.3 6.9 2 2 0.0012 0.12 6.3 3.4 20 38 676 693 657 696 0.81 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_46 - 498 Zn-ribbon_8 PF09723.5 42 0.074 7.0 9.5 1 2 0.001 0.1 6.5 5.2 7 35 75 101 75 105 0.89 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 2_46 - 498 Zn-ribbon_8 PF09723.5 42 0.074 7.0 9.5 2 2 0.033 3.2 1.7 0.1 25 37 439 450 430 459 0.71 # 34691 # 36184 # -1 # ID=2_46;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.608 1_46 - 576 Prim_Zn_Ribbon PF08273.7 40 6.6e-14 45.6 4.2 1 1 5.8e-16 1.1e-13 44.9 4.2 1 40 36 74 36 74 0.95 # 35463 # 37190 # 1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 6_2 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.013 9.2 6.7 1 2 0.0026 0.51 4.1 1.2 19 32 73 85 57 97 0.74 # 318 # 1517 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563 6_2 - 400 Zn_Tnp_IS1595 PF12760.2 46 0.013 9.2 6.7 2 2 0.0005 0.1 6.4 0.4 8 32 350 374 346 379 0.84 # 318 # 1517 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.563 2_32 - 91 HTH_11 PF08279.7 55 0.0007 13.1 0.0 1 1 9.5e-06 0.00094 12.7 0.0 1 46 9 54 9 70 0.77 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_58 - 505 HTH_11 PF08279.7 55 0.00095 12.7 0.2 1 1 2.6e-05 0.0026 11.3 0.1 16 37 16 37 11 38 0.89 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 10_1 - 60 MarR_2 PF12802.2 62 9.2e-06 19.2 0.1 1 1 2.2e-07 1.5e-05 18.5 0.1 12 49 23 60 4 60 0.84 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 3_17 - 101 MarR_2 PF12802.2 62 1.4e-05 18.6 0.0 1 1 4.3e-07 2.9e-05 17.6 0.0 11 40 33 60 28 61 0.93 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_43 - 102 MarR_2 PF12802.2 62 0.00016 15.2 0.1 1 1 3.3e-06 0.00021 14.8 0.1 22 47 34 59 22 80 0.86 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 10_1 - 60 HTH_5 PF01022.15 47 3.7e-10 33.3 0.2 1 1 5.5e-12 3.7e-10 33.3 0.2 1 43 15 60 15 60 0.93 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_32 - 91 HTH_5 PF01022.15 47 5.5e-06 19.9 0.0 1 1 1.2e-07 8e-06 19.4 0.0 6 41 12 48 8 49 0.91 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 3_17 - 101 HTH_5 PF01022.15 47 0.00087 12.9 0.0 1 1 2.9e-05 0.0019 11.7 0.0 15 34 41 60 33 60 0.84 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 10_1 - 60 TrmB PF01978.14 68 0.00015 15.4 0.0 1 1 3e-06 0.0002 14.9 0.0 12 50 20 60 17 60 0.92 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 1_58 - 505 TrmB PF01978.14 68 0.00041 14.0 0.0 1 1 2.4e-05 0.0016 12.1 0.1 22 45 15 38 13 38 0.92 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_32 - 91 TrmB PF01978.14 68 0.0018 11.9 0.0 1 1 4.2e-05 0.0027 11.3 0.0 19 48 19 48 11 52 0.85 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_58 - 505 LacI PF00356.16 46 0.0004 13.9 0.0 1 1 4.1e-06 0.00081 12.9 0.0 1 23 17 39 17 44 0.91 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 1_65 - 565 Pyr_redox_2 PF07992.9 201 1.6e-43 142.8 0.0 1 1 3.2e-45 6.4e-43 140.8 0.0 2 199 100 410 99 412 0.96 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 1 2 0.00039 0.078 6.4 0.4 28 51 105 128 99 156 0.83 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DFP PF04127.10 185 0.0015 12.0 2.4 2 2 0.0014 0.27 4.7 0.1 32 53 281 302 276 336 0.77 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 3_17 - 101 HTH_Crp_2 PF13545.1 76 2.5e-05 17.9 0.0 1 1 2.1e-07 4.1e-05 17.2 0.0 24 48 37 61 23 63 0.81 # 8614 # 8916 # -1 # ID=3_17;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.528 2_32 - 91 HTH_Mga PF08280.6 59 1.7e-06 21.6 0.0 1 1 1e-08 2e-06 21.4 0.0 2 54 5 57 4 62 0.93 # 23612 # 23884 # -1 # ID=2_32;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.465 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 1 3 1.4e-08 2.7e-06 20.3 0.7 1 38 99 134 99 190 0.84 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 2 3 0.032 6.3 -0.6 0.1 3 31 273 301 271 307 0.75 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_65 - 565 DAO PF01266.19 358 8.4e-09 28.6 11.7 3 3 9.4e-07 0.00019 14.3 0.5 152 208 314 372 307 433 0.74 # 55260 # 56954 # -1 # ID=1_65;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 1 5 0.019 3.7 1.5 8.8 39 98 89 152 77 158 0.72 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 2 5 0.00084 0.17 5.9 3.1 50 100 146 196 143 199 0.89 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 3 5 2.6e-06 0.00051 13.9 12.2 19 100 216 294 201 297 0.85 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 4 5 0.00031 0.061 7.3 2.1 62 105 284 327 282 330 0.90 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 Seryl_tRNA_N PF02403.17 108 0.051 7.5 46.3 5 5 0.0059 1.2 3.1 1.6 82 105 304 327 296 345 0.51 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_82 - 290 RNase_T PF00929.19 164 7.8e-23 75.4 0.0 1 1 5.8e-25 1.1e-22 74.9 0.0 1 163 107 264 107 265 0.94 # 69992 # 70861 # 1 # ID=1_82;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.536 1_2 - 504 AAA_10 PF12846.2 304 1.9e-59 195.4 0.2 1 1 3e-61 3e-59 194.7 0.2 1 297 139 418 139 426 0.93 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 2_14 - 622 AAA_10 PF12846.2 304 2.1e-18 60.6 0.2 1 1 5.7e-20 5.6e-18 59.2 0.2 2 299 173 549 172 553 0.71 # 7846 # 9711 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 10_1 - 60 HTH_20 PF12840.2 61 2.6e-15 49.9 0.4 1 1 6e-17 3e-15 49.7 0.4 3 52 9 60 4 60 0.94 # 1 # 180 # -1 # ID=10_1;partial=10;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.561 2_43 - 102 HTH_20 PF12840.2 61 2.5e-06 21.1 0.1 1 1 9.4e-08 4.6e-06 20.3 0.1 16 59 25 69 21 71 0.87 # 32012 # 32317 # -1 # ID=2_43;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.585 1_58 - 505 HTH_20 PF12840.2 61 0.00039 14.1 0.2 1 1 2.2e-05 0.0011 12.7 0.0 13 45 1 36 1 38 0.94 # 48085 # 49599 # -1 # ID=1_58;partial=00;start_type=GTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.542 2_40 - 226 HTH_20 PF12840.2 61 0.00048 13.8 0.1 1 1 7.2e-05 0.0035 11.0 0.0 21 46 30 55 18 63 0.85 # 29790 # 30467 # -1 # ID=2_40;partial=00;start_type=ATG;rbs_motif=GGxGG;rbs_spacer=5-10bp;gc_cont=0.627 2_26 - 169 DnaJ_CXXCXGXG PF00684.14 66 3.5e-05 17.7 0.3 1 1 3.3e-07 6.6e-05 16.8 0.3 1 32 6 38 3 49 0.70 # 20563 # 21069 # -1 # ID=2_26;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.540 1_87 - 504 UvrD_C PF13361.1 351 1.8e-10 34.6 0.0 1 1 1.7e-12 3.4e-10 33.7 0.0 238 347 359 468 334 472 0.76 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_85 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 1 2 0.0019 0.38 2.9 28.3 283 457 85 259 71 272 0.58 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 1_85 - 347 AAA_13 PF13166.1 712 0.013 7.7 36.6 2 2 2.3e-05 0.0046 9.2 23.2 287 474 160 339 154 345 0.78 # 72713 # 73753 # 1 # ID=1_85;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.509 2_34 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 1 2 3e-07 6e-05 16.0 0.0 7 40 9 43 2 79 0.84 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_34 - 262 ArsA_ATPase PF02374.10 305 1.1e-05 18.4 0.0 2 2 0.029 5.7 -0.3 0.0 124 136 124 136 106 143 0.79 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_10 - 126 DYW_deaminase PF14432.1 116 0.0011 12.8 0.1 1 1 8.9e-06 0.0018 12.2 0.1 77 111 31 65 18 69 0.82 # 5822 # 6199 # -1 # ID=2_10;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.500 2_34 - 262 AAA_31 PF13614.1 157 2.6e-10 34.3 0.0 1 1 2.6e-12 5.2e-10 33.3 0.0 1 149 3 157 3 165 0.79 # 25118 # 25903 # -1 # ID=2_34;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.534 2_36 - 272 Pterin_bind PF00809.17 210 5.6e-60 196.1 0.0 1 1 6.8e-62 6.7e-60 195.9 0.0 1 209 10 216 10 217 0.98 # 26695 # 27510 # 1 # ID=2_36;partial=00;start_type=ATG;rbs_motif=AGxAG;rbs_spacer=5-10bp;gc_cont=0.608 1_55 - 280 Pterin_bind PF00809.17 210 5e-58 189.7 0.0 1 1 6.1e-60 6e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 45311 # 46150 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_57 - 262 IstB_IS21 PF01695.12 178 6.1e-69 224.8 0.1 1 1 8.2e-71 8.1e-69 224.4 0.1 2 177 55 230 54 231 0.98 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_2 - 504 IstB_IS21 PF01695.12 178 0.0012 12.2 0.0 1 1 3.4e-05 0.0033 10.7 0.0 45 88 137 180 94 187 0.82 # 363 # 1874 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_87 - 504 AAA_11 PF13086.1 236 5.7e-07 23.2 0.1 1 1 3.8e-08 3.7e-06 20.5 0.1 23 228 25 228 8 229 0.66 # 74040 # 75551 # 1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=3-4bp;gc_cont=0.509 1_57 - 262 AAA_11 PF13086.1 236 0.00089 12.7 0.3 1 1 1.7e-05 0.0017 11.8 0.3 6 44 89 142 82 260 0.72 # 47313 # 48098 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.503 1_16 - 176 SSB PF00436.20 104 2.4e-41 133.7 0.3 1 1 1.5e-43 3.1e-41 133.4 0.3 1 104 5 109 5 109 0.99 # 13482 # 14009 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.549 1_59 - 515 HTH_21 PF13276.1 60 1.9e-15 50.6 5.4 1 2 0.069 14 -0.2 0.2 8 33 37 63 31 73 0.76 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_59 - 515 HTH_21 PF13276.1 60 1.9e-15 50.6 5.4 2 2 9.5e-18 1.9e-15 50.6 5.4 6 60 271 324 266 325 0.88 # 49731 # 51275 # 1 # ID=1_59;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 2_18 - 731 Zn_ribbon_recom PF13408.1 58 9.3e-06 19.8 8.2 1 2 0.00033 0.065 7.5 0.7 8 40 637 668 636 680 0.71 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_18 - 731 Zn_ribbon_recom PF13408.1 58 9.3e-06 19.8 8.2 2 2 1.1e-06 0.00021 15.4 1.4 8 41 685 719 685 728 0.80 # 13680 # 15872 # 1 # ID=2_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/f88c9321-20be-4c0a-8bbd-2334b448a1cd # Target file: checkm_output/bins/pm1222/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1222/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/f88c9321-20be-4c0a-8bbd-2334b448a1cd checkm_output/bins/pm1222/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:37:56 2017 # [ok]