# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_2 - 66 HTH_8 PF02954.14 42 7.3e-12 33.2 0.1 1 1 2.4e-12 9.6e-12 32.8 0.1 6 41 27 62 22 63 0.92 # 1109 # 1306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 1_2 - 66 HTH_23 PF13384.1 50 8.3e-06 13.9 0.0 1 1 2.5e-06 1e-05 13.6 0.0 16 41 37 63 7 64 0.89 # 1109 # 1306 # 1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=3Base/5BMM;rbs_spacer=13-15bp;gc_cont=0.429 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/ad274742-fbc6-4440-9a66-f61570ab0812 # Target file: checkm_output/bins/pm1199/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1199/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/ad274742-fbc6-4440-9a66-f61570ab0812 checkm_output/bins/pm1199/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:37:14 2017 # [ok]