# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_8 - 284 RepC PF06504.6 283 8.7e-159 516.5 0.1 1 1 8.8e-160 9.6e-159 516.4 0.1 2 282 2 282 1 283 0.99 # 5902 # 6753 # 1 # ID=1_8;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.661 1_1 - 438 DDE_5 PF13546.1 273 5.5e-06 15.1 0.1 1 1 8.4e-07 9.3e-06 14.4 0.1 179 243 223 286 206 307 0.85 # 1 # 1314 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.641 1_1 - 438 DDE_Tnp_1 PF01609.16 213 1.8e-33 105.6 0.0 1 1 2.4e-34 2.7e-33 105.1 0.0 3 213 153 381 151 381 0.94 # 1 # 1314 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.641 1_1 - 438 DDE_Tnp_1_4 PF13701.1 449 5.1e-80 258.5 0.0 1 1 7.1e-81 7.9e-80 257.9 0.0 7 428 19 427 15 437 0.91 # 1 # 1314 # -1 # ID=1_1;partial=10;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.641 1_7 - 280 AAA_25 PF13481.1 194 8.5e-38 119.4 0.0 1 1 1.1e-38 1.2e-37 118.9 0.0 14 192 12 183 5 185 0.88 # 5076 # 5915 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.669 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/75575479-4893-4bd2-80d5-c5ebaf951b08 # Target file: checkm_output/bins/pm1137/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1137/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/75575479-4893-4bd2-80d5-c5ebaf951b08 checkm_output/bins/pm1137/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:35:30 2017 # [ok]