# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_21 - 492 ATP-synt_ab PF00006.20 215 1.2e-05 17.0 0.1 1 2 0.044 2.5 -0.4 0.0 17 34 32 49 28 55 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ATP-synt_ab PF00006.20 215 1.2e-05 17.0 0.1 2 2 1.5e-06 8.4e-05 14.2 0.1 7 66 314 380 307 402 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_42 - 92 Zn_Tnp_IS1 PF03811.8 36 4.5e-24 75.8 4.5 1 1 3.2e-25 8.9e-24 74.9 4.5 1 36 1 36 1 36 0.99 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_9 - 92 Zn_Tnp_IS1 PF03811.8 36 1.2e-23 74.5 3.6 1 1 7.9e-25 2.2e-23 73.6 3.6 1 36 1 36 1 36 0.99 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 1 4 5.6e-10 3.2e-08 26.1 0.1 5 37 24 56 20 66 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 2 4 1e-07 5.8e-06 18.7 0.0 101 137 94 128 73 128 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 3 4 0.041 2.3 0.6 0.5 51 102 203 255 163 276 0.46 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 ABC_tran PF00005.22 137 1.9e-31 101.3 8.0 4 4 3.2e-19 1.8e-17 56.0 0.1 2 136 313 436 312 437 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 HTH_22 PF13309.1 64 6e-07 21.3 0.1 1 1 4e-08 2.2e-06 19.5 0.0 19 64 4 44 1 44 0.88 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 DUF815 PF05673.8 250 1.4e-05 16.2 0.2 1 2 0.00013 0.0071 7.3 0.0 58 77 35 54 27 63 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF815 PF05673.8 250 1.4e-05 16.2 0.2 2 2 0.00031 0.017 6.0 0.0 55 76 324 345 315 351 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_5 - 424 Cdd1 PF11731.3 93 0.00011 14.2 0.0 1 1 5.6e-06 0.00031 12.8 0.0 10 50 177 217 143 228 0.86 # 3965 # 5236 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_49 - 268 rve_3 PF13683.1 67 1.3e-17 55.2 0.0 1 1 9.2e-19 2.6e-17 54.3 0.0 5 67 196 259 192 259 0.97 # 44610 # 45413 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_19 - 468 rve_3 PF13683.1 67 7.6e-05 14.3 0.0 1 1 6.6e-06 0.00018 13.1 0.0 16 56 252 295 237 295 0.88 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_37 - 325 Sigma54_activat PF00158.21 168 1.4e-64 208.7 0.0 1 1 3.6e-66 2e-64 208.2 0.0 2 163 9 170 8 175 0.98 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_50 - 95 HTH_38 PF13936.1 44 0.00026 12.6 0.7 1 2 1.1e-05 0.00062 11.5 0.0 17 42 19 44 3 45 0.77 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 HTH_38 PF13936.1 44 0.00026 12.6 0.7 2 2 0.087 4.9 -1.0 0.2 10 19 62 71 59 81 0.71 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_39 - 338 TIGR01830 TIGR01830 239 6.5e-48 155.2 0.0 1 1 1.5e-49 8.5e-48 154.9 0.0 1 237 60 298 60 299 0.92 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_21 - 492 MobB PF03205.9 140 2.8e-05 16.0 0.4 1 2 0.0015 0.086 4.7 0.0 2 20 32 50 31 61 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 MobB PF03205.9 140 2.8e-05 16.0 0.4 2 2 7.6e-05 0.0042 8.9 0.1 3 23 325 345 323 353 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_24 - 258 FmrO PF07091.6 251 2.3e-85 277.6 0.0 1 1 4.7e-87 2.6e-85 277.4 0.0 1 251 12 251 12 251 0.99 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_17 - 181 UvrD-helicase PF00580.16 315 8e-05 14.1 3.8 1 1 1.7e-06 9.3e-05 13.9 3.8 127 229 52 155 10 161 0.72 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 1 3 0.002 0.11 1.7 0.0 13 36 26 49 22 50 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 2 3 0.0047 0.26 0.5 7.1 629 703 191 268 173 301 0.38 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF3584 PF12128.3 1201 0.004 6.5 13.2 3 3 8.7e-05 0.0049 6.2 0.3 19 37 324 342 318 343 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 HTH_8 PF02954.14 42 5.6e-10 30.8 0.4 1 1 2e-11 1.1e-09 29.8 0.4 6 41 286 321 282 322 0.92 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_50 - 95 TetR_N PF00440.18 47 7.3e-06 17.7 0.3 1 1 6.5e-07 1.8e-05 16.5 0.0 4 35 13 41 12 42 0.93 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_17 - 181 TetR_N PF00440.18 47 0.00046 12.0 0.1 1 1 3.8e-05 0.0011 10.8 0.1 15 36 2 23 1 23 0.94 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_21 - 492 AAA_19 PF13245.1 76 9.3e-05 14.3 0.1 1 1 7.3e-06 0.00041 12.2 0.0 10 48 323 360 317 370 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_3 - 402 CbiA PF01656.18 195 8.5e-19 59.8 0.0 1 1 2.8e-20 1.6e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_21 - 492 PRK PF00485.13 194 0.00016 13.3 0.2 1 2 0.0023 0.13 3.8 0.0 2 21 33 52 32 85 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PRK PF00485.13 194 0.00016 13.3 0.2 2 2 0.00027 0.015 6.9 0.0 2 33 325 364 325 409 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 Sigma70_r4_2 PF08281.7 54 6.6e-05 14.5 1.8 1 2 4.5e-06 0.00012 13.6 0.1 22 48 18 44 11 47 0.83 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 Sigma70_r4_2 PF08281.7 54 6.6e-05 14.5 1.8 2 2 0.073 2.1 0.1 0.2 2 15 63 76 62 82 0.78 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_4 - 325 Sigma70_r4_2 PF08281.7 54 0.00023 12.7 0.1 1 1 2.7e-05 0.00077 11.1 0.1 23 50 157 184 152 185 0.88 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_1 - 281 Rep_3 PF01051.16 222 6.2e-49 158.6 0.0 1 1 2.7e-50 7.5e-49 158.3 0.0 3 213 57 270 55 275 0.95 # 2 # 844 # 1 # ID=1_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.440 1_16 - 256 Rep_3 PF01051.16 222 1e-40 131.7 1.7 1 1 3.7e-42 1e-40 131.7 1.7 57 222 6 172 1 172 0.95 # 14623 # 15390 # 1 # ID=1_16;partial=00;start_type=TTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.345 1_49 - 268 rve PF00665.21 120 1.5e-32 104.4 0.0 1 1 1.6e-33 2.3e-32 103.8 0.0 3 119 106 220 104 221 0.98 # 44610 # 45413 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_15 - 235 rve PF00665.21 120 1.8e-13 42.8 0.1 1 2 0.059 0.83 1.9 0.0 78 102 27 49 6 54 0.84 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_15 - 235 rve PF00665.21 120 1.8e-13 42.8 0.1 2 2 2.4e-13 3.4e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_19 - 468 rve PF00665.21 120 4.7e-10 31.7 0.0 1 1 6e-11 8.4e-10 30.9 0.0 3 119 141 265 139 266 0.82 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_25 - 279 rve PF00665.21 120 0.00037 12.7 0.0 1 1 5e-05 0.0007 11.8 0.0 4 96 86 186 84 199 0.76 # 24454 # 25290 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_26 - 514 zf-ribbon_3 PF13248.1 26 0.032 5.7 9.1 1 2 9.1e-05 0.0051 8.2 0.9 18 24 95 101 93 108 0.74 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 zf-ribbon_3 PF13248.1 26 0.032 5.7 9.1 2 2 0.0085 0.48 1.9 0.1 18 23 449 454 446 457 0.83 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_50 - 95 Terminase_5 PF06056.7 58 1.1e-05 17.0 0.0 1 1 3.4e-07 1.9e-05 16.3 0.0 12 39 21 48 12 63 0.87 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 1 3 3.8e-05 0.0021 10.4 0.0 24 38 35 49 25 57 0.91 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 2 3 0.0033 0.18 4.1 1.4 141 177 187 244 105 280 0.58 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_23 PF13476.1 202 2.8e-08 26.4 8.6 3 3 1.9e-06 0.00011 14.7 0.4 22 39 325 342 288 343 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_24 PF13479.1 213 2.1e-05 16.2 3.2 1 2 0.00068 0.038 5.6 0.0 8 38 35 64 30 111 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_24 PF13479.1 213 2.1e-05 16.2 3.2 2 2 2.2e-05 0.0012 10.5 0.1 4 23 323 342 321 356 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_48 - 296 TIGR00416 TIGR00416 454 3.3e-10 31.0 0.0 1 1 7.7e-12 4.3e-10 30.6 0.0 372 436 200 264 176 279 0.88 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_21 - 492 Zeta_toxin PF06414.7 201 2.9e-05 15.3 1.5 1 2 0.00024 0.014 6.6 0.0 21 40 35 54 30 63 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Zeta_toxin PF06414.7 201 2.9e-05 15.3 1.5 2 2 0.00017 0.0098 7.0 0.0 20 40 326 346 309 353 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_24 - 258 TehB PF03848.9 192 0.00043 11.5 2.3 1 1 3.7e-06 0.00021 12.6 0.2 32 112 108 190 66 207 0.86 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 AAA_30 PF13604.1 196 1.8e-05 16.5 1.7 1 2 0.0022 0.12 4.0 0.0 18 39 31 51 25 61 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_30 PF13604.1 196 1.8e-05 16.5 1.7 2 2 2.4e-05 0.0013 10.4 0.0 21 133 325 467 321 469 0.59 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_4 - 325 CPSase_L_D3 PF02787.14 123 2.8e-05 16.0 0.7 1 2 0.018 1 1.3 0.0 75 116 16 55 6 57 0.82 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_4 - 325 CPSase_L_D3 PF02787.14 123 2.8e-05 16.0 0.7 2 2 7.2e-06 0.0004 12.3 0.2 48 97 133 185 124 190 0.84 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 1 4 0.00018 0.01 7.1 0.0 29 43 35 49 25 65 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 2 4 0.00018 0.0099 7.2 0.0 116 203 79 160 70 173 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 3 4 0.00011 0.0062 7.8 0.1 27 44 325 342 311 344 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 SMC_N PF02463.14 220 1.2e-10 33.0 6.8 4 4 7.9e-06 0.00044 11.6 0.2 117 211 382 478 359 485 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 HTH_Tnp_1 PF01527.15 76 1.5e-19 61.9 0.2 1 1 1e-20 1.9e-19 61.5 0.2 4 76 3 74 1 74 0.94 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 235 HTH_Tnp_1 PF01527.15 76 0.00014 14.0 0.3 1 1 1.6e-05 0.0003 12.9 0.3 4 51 6 58 4 63 0.79 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_46 - 64 HTH_Tnp_1 PF01527.15 76 0.00022 13.3 0.0 1 1 1.7e-05 0.00032 12.8 0.0 4 25 2 22 1 25 0.89 # 42178 # 42369 # -1 # ID=1_46;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.510 1_15 - 235 DDE_3 PF13358.1 146 0.00039 12.3 0.0 1 1 2.1e-05 0.0012 10.7 0.0 32 90 82 141 59 146 0.87 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_3 - 402 MipZ PF09140.6 261 1.1e-06 20.0 0.0 1 2 0.0027 0.15 3.1 0.0 3 50 111 163 109 193 0.73 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_3 - 402 MipZ PF09140.6 261 1.1e-06 20.0 0.0 2 2 8.7e-07 4.9e-05 14.6 0.0 87 136 233 282 220 296 0.87 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_47 - 308 DDE_Tnp_1 PF01609.16 213 4.5e-25 80.5 0.7 1 1 4.3e-26 6e-25 80.1 0.7 4 205 115 286 112 293 0.88 # 42579 # 43502 # -1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_25 - 279 DDE_Tnp_1 PF01609.16 213 1.1e-24 79.2 0.1 1 1 1.1e-25 1.5e-24 78.7 0.1 6 205 90 257 87 264 0.91 # 24454 # 25290 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_12 - 226 DDE_Tnp_1 PF01609.16 213 1.2e-16 53.0 0.1 1 1 1.2e-17 1.6e-16 52.5 0.1 4 101 115 212 112 221 0.91 # 10248 # 10925 # 1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.509 1_22 - 392 DDE_Tnp_1 PF01609.16 213 5.9e-16 50.7 0.2 1 1 6e-17 8.4e-16 50.2 0.2 63 211 142 315 91 317 0.78 # 21455 # 22630 # -1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.469 1_25 - 279 DDE_Tnp_1_2 PF13586.1 88 4.1e-05 15.9 1.0 1 1 1.6e-06 8.8e-05 14.8 0.0 1 32 163 194 163 211 0.89 # 24454 # 25290 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_4 - 325 Trp_repressor PF01371.14 88 0.00047 12.2 1.9 1 1 3.9e-05 0.0022 10.1 0.1 15 69 127 180 119 187 0.81 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 1 4 3.9e-07 2.2e-05 16.6 0.6 3 21 34 52 33 85 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 2 4 0.00027 0.015 7.2 0.0 237 303 100 160 91 160 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 3 4 4.9e-07 2.8e-05 16.2 0.0 3 43 326 361 325 384 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_21 PF13304.1 303 1.1e-18 60.3 5.1 4 4 6.8e-08 3.8e-06 19.1 0.0 233 301 405 467 386 469 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 Sigma70_r4 PF04545.11 50 8.9e-05 13.9 0.7 1 2 2.2e-05 0.0012 10.2 0.2 13 33 15 35 11 37 0.83 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 Sigma70_r4 PF04545.11 50 8.9e-05 13.9 0.7 2 2 0.035 2 -0.0 0.0 6 14 75 83 75 89 0.83 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_37 - 325 AAA PF00004.24 132 8.7e-06 18.1 0.0 1 1 6.8e-07 1.9e-05 17.0 0.0 1 125 32 167 32 171 0.73 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 AAA PF00004.24 132 2.3e-05 16.7 0.1 1 2 0.011 0.32 3.3 0.0 3 22 35 54 33 124 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA PF00004.24 132 2.3e-05 16.7 0.1 2 2 6.4e-05 0.0018 10.6 0.0 3 23 327 347 325 437 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_4 - 325 HTH_37 PF13744.1 80 4.2e-05 15.4 2.7 1 2 0.011 0.63 2.1 0.0 27 56 9 38 6 43 0.82 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_4 - 325 HTH_37 PF13744.1 80 4.2e-05 15.4 2.7 2 2 3e-05 0.0017 10.3 0.2 27 53 156 182 134 185 0.87 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_49 - 268 rve_2 PF13333.1 52 3e-17 54.6 0.2 1 1 9e-19 5e-17 53.9 0.2 1 50 211 265 211 266 0.93 # 44610 # 45413 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_50 - 95 MerR_1 PF13411.1 69 5.1e-06 18.4 0.0 1 1 2e-07 1.1e-05 17.2 0.0 1 22 23 44 23 51 0.94 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 cobW PF02492.14 178 0.00015 13.3 1.3 1 2 0.0051 0.29 2.6 0.0 3 19 33 49 31 59 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 cobW PF02492.14 178 0.00015 13.3 1.3 2 2 6.1e-05 0.0034 8.9 0.3 3 28 325 349 323 352 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_16 PF13191.1 185 5.4e-06 18.6 0.1 1 2 0.00079 0.022 6.8 0.0 29 44 35 50 22 151 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_16 PF13191.1 185 5.4e-06 18.6 0.1 2 2 0.00014 0.004 9.2 0.0 27 49 325 347 320 410 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA_16 PF13191.1 185 0.00015 13.9 0.1 1 1 1.4e-05 0.0004 12.5 0.0 18 64 21 69 10 126 0.78 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_21 - 492 AAA_22 PF13401.1 131 9.8e-09 27.6 0.8 1 2 0.0025 0.14 4.4 0.0 9 25 35 51 30 144 0.78 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_22 PF13401.1 131 9.8e-09 27.6 0.8 2 2 2e-08 1.1e-06 20.9 0.0 7 125 325 464 322 471 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_29 PF13555.1 62 2.4e-08 25.5 0.5 1 2 9.5e-06 0.00053 11.6 0.0 25 40 32 47 20 52 0.78 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_29 PF13555.1 62 2.4e-08 25.5 0.5 2 2 1.1e-05 0.00061 11.4 0.1 14 40 314 339 310 343 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_29 - 292 HTH_1 PF00126.22 60 1.3e-23 74.7 2.1 1 1 4.8e-25 2.7e-23 73.7 2.1 1 60 8 67 8 67 0.97 # 28903 # 29778 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.602 1_19 - 468 LZ_Tnp_IS481 PF13011.1 85 7.5e-07 21.6 0.1 1 1 7.7e-08 2.2e-06 20.1 0.1 13 61 15 63 4 78 0.89 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_50 - 95 LZ_Tnp_IS481 PF13011.1 85 1.4e-05 17.5 0.1 1 1 6.6e-07 1.9e-05 17.1 0.1 17 50 14 47 2 87 0.84 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_39 - 338 adh_short_C2 PF13561.1 241 2.9e-30 97.8 0.0 1 1 6e-32 3.4e-30 97.6 0.0 5 239 66 298 63 300 0.96 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_50 - 95 HTH_Tnp_IS630 PF01710.11 120 3.3e-07 22.1 0.1 1 1 6.8e-09 3.8e-07 21.9 0.1 13 82 17 90 6 94 0.75 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 AAA_28 PF13521.1 163 2.2e-05 16.6 4.3 1 2 0.023 1.3 1.0 0.0 2 20 33 51 32 66 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_28 PF13521.1 163 2.2e-05 16.6 4.3 2 2 5.6e-07 3.2e-05 16.0 0.1 1 34 324 359 324 391 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_39 - 338 adh_short PF00106.20 167 1.2e-34 111.7 0.1 1 1 2.7e-36 1.5e-34 111.4 0.1 3 166 60 225 58 226 0.97 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_19 - 468 HTH_32 PF13565.1 77 1.3e-07 24.5 0.1 1 2 0.06 1.7 1.7 0.1 44 77 24 48 12 48 0.74 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 468 HTH_32 PF13565.1 77 1.3e-07 24.5 0.1 2 2 4.5e-09 1.3e-07 24.5 0.1 3 77 45 117 43 117 0.74 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_15 - 235 HTH_32 PF13565.1 77 7.2e-07 22.1 0.2 1 1 1.1e-07 3.2e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_26 - 514 A2L_zn_ribbon PF08792.5 33 0.0037 8.9 4.7 1 2 0.00018 0.01 7.5 0.6 5 29 76 101 74 102 0.90 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 A2L_zn_ribbon PF08792.5 33 0.0037 8.9 4.7 2 2 0.0078 0.44 2.3 0.3 20 28 446 454 444 457 0.62 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_50 - 95 HTH_3 PF01381.17 55 2e-06 19.7 0.0 1 2 1.8e-07 1e-05 17.5 0.0 4 33 15 46 13 51 0.86 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 HTH_3 PF01381.17 55 2e-06 19.7 0.0 2 2 0.073 4.1 -0.5 0.0 39 52 80 93 79 94 0.80 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_39 - 338 Epimerase PF01370.16 236 1e-06 20.4 0.0 1 1 2.5e-08 1.4e-06 19.9 0.0 1 157 60 224 60 238 0.80 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_19 - 468 HTH_23 PF13384.1 50 6.8e-12 36.9 0.9 1 1 2.5e-12 2.3e-11 35.2 0.9 2 48 11 58 10 60 0.94 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_50 - 95 HTH_23 PF13384.1 50 5.2e-09 27.7 3.6 1 2 8.1e-10 7.5e-09 27.2 0.2 10 40 14 45 9 59 0.83 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 HTH_23 PF13384.1 50 5.2e-09 27.7 3.6 2 2 0.077 0.72 1.8 0.5 7 24 62 86 56 91 0.53 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_15 - 235 HTH_23 PF13384.1 50 4.4e-06 18.4 0.5 1 2 0.095 0.88 1.6 0.0 7 27 11 35 7 36 0.69 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_15 - 235 HTH_23 PF13384.1 50 4.4e-06 18.4 0.5 2 2 1.1e-05 0.0001 14.0 0.1 28 42 41 55 40 62 0.87 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 HTH_23 PF13384.1 50 1.3e-05 17.0 0.0 1 1 2.2e-06 2e-05 16.3 0.0 7 40 53 86 51 90 0.93 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_9 - 92 HTH_23 PF13384.1 50 2.1e-05 16.2 0.0 1 1 3.8e-06 3.6e-05 15.5 0.0 7 39 53 85 51 89 0.93 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_4 - 325 HTH_23 PF13384.1 50 0.00011 14.0 0.2 1 1 0.00015 0.0014 10.5 0.0 9 40 152 183 151 188 0.88 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_50 - 95 HTH_7 PF02796.10 45 2.5e-05 16.3 0.0 1 1 9.2e-07 5.1e-05 15.2 0.0 13 44 14 45 8 46 0.89 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_26 - 514 Ribosomal_S27e PF01667.12 55 4.8e-05 15.0 0.8 1 1 8.6e-07 4.8e-05 15.0 0.8 5 33 72 100 69 105 0.90 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_50 - 95 HTH_19 PF12844.2 64 7.3e-06 18.1 0.1 1 1 2.6e-07 1.5e-05 17.2 0.0 9 34 19 44 16 62 0.89 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_39 - 338 DUF1776 PF08643.5 299 7e-05 14.1 0.0 1 1 1.9e-06 0.00011 13.5 0.0 107 195 152 234 146 239 0.84 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_9 - 92 zinc_ribbon_4 PF13717.1 36 8.9e-06 17.5 2.8 1 1 1.1e-06 2e-05 16.4 2.8 3 35 6 39 5 40 0.86 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 zinc_ribbon_4 PF13717.1 36 3.2e-05 15.7 4.1 1 1 4.7e-06 8.7e-05 14.3 4.1 3 35 6 39 5 40 0.86 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_26 - 514 zinc_ribbon_4 PF13717.1 36 0.0032 9.3 4.0 1 2 0.0013 0.024 6.5 0.1 1 12 73 84 73 87 0.82 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 zinc_ribbon_4 PF13717.1 36 0.0032 9.3 4.0 2 2 0.019 0.35 2.8 0.0 5 14 96 105 95 113 0.81 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_37 - 325 Mg_chelatase PF01078.16 207 5.3e-09 27.6 0.0 1 2 0.00013 0.007 7.6 0.0 25 45 32 52 27 60 0.89 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_37 - 325 Mg_chelatase PF01078.16 207 5.3e-09 27.6 0.0 2 2 1e-07 5.7e-06 17.7 0.0 92 157 86 149 79 158 0.89 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_19 - 468 HTH_29 PF13551.1 112 4.6e-16 51.1 1.2 1 1 4.1e-17 1.2e-15 49.8 1.2 1 112 16 121 16 121 0.89 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_17 - 181 HTH_29 PF13551.1 112 0.00032 13.0 0.0 1 1 2.9e-05 0.00082 11.7 0.0 12 47 4 39 1 91 0.86 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_43 - 214 TIGR03413 TIGR03413 248 8.1e-07 20.4 0.0 1 1 1.8e-08 9.8e-07 20.1 0.0 41 146 56 173 16 183 0.73 # 39512 # 40153 # 1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.410 1_21 - 492 ABC_tran_2 PF12848.2 85 3.5e-14 44.6 16.1 1 1 2e-14 1.1e-12 39.8 16.1 1 85 167 283 167 283 0.93 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_15 - 235 DDE_Tnp_IS66 PF03050.9 271 1.5e-12 39.3 0.6 1 1 3.7e-14 2.1e-12 38.9 0.4 5 131 10 143 6 158 0.86 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_17 - 181 IF2_N PF04760.10 54 6.9e-05 14.6 1.1 1 1 4.3e-06 0.00024 12.9 0.0 1 40 1 38 1 48 0.75 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_25 - 279 DDE_Tnp_1_7 PF13843.1 351 0.00019 12.6 0.0 1 1 4.2e-06 0.00024 12.3 0.0 148 262 111 219 85 258 0.77 # 24454 # 25290 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_24 - 258 Methyltransf_31 PF13847.1 152 0.00018 13.2 0.2 1 2 0.093 5.2 -1.3 0.0 95 98 39 42 7 89 0.58 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_24 - 258 Methyltransf_31 PF13847.1 152 0.00018 13.2 0.2 2 2 8.4e-06 0.00047 11.9 0.0 5 83 108 182 104 231 0.78 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 1 3 0.02 1.1 0.9 0.0 25 40 35 50 24 85 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 2 3 0.0083 0.46 2.1 0.7 53 104 181 237 166 267 0.65 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Arch_ATPase PF01637.13 234 5.8e-05 14.9 3.0 3 3 3.2e-05 0.0018 10.0 0.0 24 68 326 374 323 473 0.69 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA_5 PF07728.9 139 1.3e-09 30.0 0.0 1 1 3.8e-11 2.2e-09 29.3 0.0 1 123 31 150 31 169 0.81 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_48 - 296 TIGR00763 TIGR00763 795 2.9e-16 50.8 0.0 1 1 5.6e-18 3.1e-16 50.6 0.0 627 792 124 290 54 292 0.82 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_3 - 402 TIGR01968 TIGR01968 261 0.00048 11.3 0.0 1 2 0.0091 0.51 1.3 0.0 4 28 111 135 108 169 0.76 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_3 - 402 TIGR01968 TIGR01968 261 0.00048 11.3 0.0 2 2 0.00016 0.0087 7.1 0.0 102 138 235 271 226 288 0.87 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_21 - 492 AAA_18 PF13238.1 129 0.00055 12.4 8.3 1 2 0.0015 0.086 5.3 0.0 1 21 33 53 33 89 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_18 PF13238.1 129 0.00055 12.4 8.3 2 2 3.5e-05 0.0019 10.6 0.6 1 23 325 354 325 475 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR00611 TIGR00611 365 0.00036 11.4 2.8 1 3 0.0032 0.18 2.6 0.0 27 41 34 48 20 55 0.82 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR00611 TIGR00611 365 0.00036 11.4 2.8 2 3 0.01 0.58 0.9 0.2 81 124 230 273 204 274 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR00611 TIGR00611 365 0.00036 11.4 2.8 3 3 0.0004 0.022 5.6 0.0 27 43 326 342 318 348 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_5 - 424 IMS_HHH PF11798.3 32 1.4e-08 26.6 0.1 1 1 6.4e-10 3.6e-08 25.3 0.1 2 32 170 200 169 200 0.91 # 3965 # 5236 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_24 - 258 Methyltransf_12 PF08242.7 99 3.1e-06 19.8 0.0 1 1 1.2e-07 6.5e-06 18.7 0.0 1 82 111 188 111 199 0.85 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_9 - 92 HTH_Tnp_IS1 PF12759.2 46 6e-32 101.0 0.2 1 1 3.4e-33 9.6e-32 100.4 0.2 1 45 43 87 43 88 0.99 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 HTH_Tnp_IS1 PF12759.2 46 1.1e-31 100.1 0.2 1 1 6.4e-33 1.8e-31 99.5 0.2 1 46 43 88 43 88 0.99 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_21 - 492 DUF258 PF03193.11 161 4.4e-09 27.8 0.1 1 2 2e-07 1.1e-05 16.7 0.0 39 95 34 126 15 136 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF258 PF03193.11 161 4.4e-09 27.8 0.1 2 2 6.4e-05 0.0036 8.6 0.0 38 67 325 352 302 391 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 1 4 0.0013 0.072 4.9 0.0 25 48 32 55 20 62 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 2 4 0.063 3.5 -0.6 1.7 115 174 205 266 179 295 0.51 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 3 4 0.00099 0.055 5.3 0.3 25 46 324 345 321 357 0.88 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 DUF87 PF01935.12 229 0.0077 8.1 11.6 4 4 0.0088 0.49 2.2 0.1 40 196 415 472 368 486 0.56 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_19 - 468 HTH_28 PF13518.1 52 1.5e-12 39.5 2.6 1 1 2.6e-13 2.5e-12 38.8 1.6 2 48 16 63 15 70 0.93 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_50 - 95 HTH_28 PF13518.1 52 1.1e-08 27.1 0.2 1 1 2.3e-09 2.1e-08 26.2 0.2 1 35 10 45 10 47 0.90 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_9 - 92 HTH_28 PF13518.1 52 2.4e-05 16.5 0.0 1 1 3.7e-06 3.4e-05 15.9 0.0 4 36 55 87 53 91 0.90 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_15 - 235 HTH_28 PF13518.1 52 3.2e-05 16.0 1.2 1 1 1.5e-05 0.00014 14.0 1.2 22 36 40 54 13 55 0.76 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 HTH_28 PF13518.1 52 4.9e-05 15.4 0.0 1 1 8.1e-06 7.5e-05 14.8 0.0 4 35 55 86 53 90 0.90 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_17 - 181 HTH_28 PF13518.1 52 5.1e-05 15.4 0.0 1 1 9.2e-06 8.6e-05 14.7 0.0 14 46 5 38 1 44 0.85 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_4 - 325 HTH_24 PF13412.1 48 6.4e-05 14.5 0.1 1 1 2.3e-06 6.4e-05 14.5 0.1 15 39 158 182 151 184 0.84 # 2909 # 3883 # 1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.447 1_19 - 468 HTH_24 PF13412.1 48 0.00015 13.3 0.2 1 1 3.3e-05 0.00092 10.7 0.1 15 43 25 53 17 55 0.82 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_37 - 325 Sigma54_activ_2 PF14532.1 138 3.4e-25 80.8 0.0 1 1 2.2e-26 1.2e-24 79.0 0.0 1 138 9 179 9 179 0.90 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_50 - 95 HTH_10 PF04967.7 53 1.3e-06 20.1 0.1 1 2 9.7e-07 5.4e-05 14.9 0.0 21 47 20 46 19 48 0.92 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_50 - 95 HTH_10 PF04967.7 53 1.3e-06 20.1 0.1 2 2 0.0052 0.29 2.9 0.0 2 14 75 87 75 89 0.90 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 MMR_HSR1 PF01926.18 116 1e-06 20.8 4.1 1 2 2.2e-05 0.0012 10.9 0.1 1 27 32 92 32 178 0.52 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 MMR_HSR1 PF01926.18 116 1e-06 20.8 4.1 2 2 4.9e-05 0.0027 9.8 0.7 1 99 324 473 324 488 0.56 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_48 - 296 Lon_C PF05362.8 205 7.6e-18 56.6 0.0 1 1 2e-19 1.1e-17 56.1 0.0 44 200 133 290 97 294 0.87 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_21 - 492 Miro PF08477.8 119 2.1e-09 30.0 1.0 1 2 5.7e-06 0.00032 13.3 0.0 1 21 32 52 32 82 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Miro PF08477.8 119 2.1e-09 30.0 1.0 2 2 3.4e-06 0.00019 14.0 0.0 1 25 324 348 324 392 0.72 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 HTH_31 PF13560.1 64 1.5e-05 17.3 0.2 1 1 4.8e-07 2.7e-05 16.5 0.2 12 53 20 61 11 63 0.90 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_48 - 296 ChlI PF13541.1 121 4.8e-07 21.4 0.1 1 1 2e-08 1.1e-06 20.3 0.0 62 120 202 260 168 261 0.89 # 43615 # 44502 # 1 # ID=1_48;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.462 1_21 - 492 NACHT PF05729.7 166 7.9e-07 20.9 0.1 1 2 0.00046 0.026 6.3 0.0 3 20 33 50 31 63 0.86 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 NACHT PF05729.7 166 7.9e-07 20.9 0.1 2 2 7.1e-06 0.0004 12.2 0.0 3 24 325 346 323 394 0.84 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 UPF0079 PF02367.12 123 0.00023 12.9 0.1 1 2 0.0017 0.098 4.4 0.0 18 36 33 51 26 60 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 UPF0079 PF02367.12 123 0.00023 12.9 0.1 2 2 0.00063 0.035 5.8 0.0 14 39 321 346 312 357 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_17 PF13207.1 121 5e-07 22.7 3.7 1 2 0.0023 0.13 5.2 0.4 1 20 32 51 32 195 0.85 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_17 PF13207.1 121 5e-07 22.7 3.7 2 2 3e-07 1.7e-05 17.8 0.1 1 52 324 379 324 486 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_26 - 514 DZR PF12773.2 50 0.0033 9.4 4.8 1 2 0.0017 0.093 4.8 3.4 1 20 77 101 64 109 0.61 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 DZR PF12773.2 50 0.0033 9.4 4.8 2 2 0.0053 0.3 3.1 0.0 13 23 448 458 441 487 0.75 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_21 - 492 TIGR02211 TIGR02211 221 1.1e-30 98.6 2.1 1 4 3.1e-07 1.8e-05 16.1 0.0 18 53 17 52 4 67 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR02211 TIGR02211 221 1.1e-30 98.6 2.1 2 4 2e-14 1.1e-12 39.7 0.0 124 220 85 175 68 176 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR02211 TIGR02211 221 1.1e-30 98.6 2.1 3 4 1.1e-05 0.00061 11.1 0.0 19 52 310 343 305 358 0.90 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 TIGR02211 TIGR02211 221 1.1e-30 98.6 2.1 4 4 5.5e-11 3.1e-09 28.4 0.0 124 219 390 483 373 485 0.82 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 1 3 0.0073 0.41 2.1 0.0 37 54 34 51 30 72 0.81 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 2 3 1.4e-05 0.00079 10.9 0.0 29 54 318 343 294 423 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_25 PF13481.1 194 1.1e-05 17.0 0.0 3 3 0.06 3.4 -0.9 0.0 168 188 443 463 425 466 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 1 3 6e-05 0.0034 8.5 0.0 26 54 34 58 5 119 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 2 3 6.4e-06 0.00036 11.7 0.0 26 90 326 383 300 417 0.60 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_15 PF13175.1 415 2.1e-10 32.2 1.2 3 3 3.8e-05 0.0022 9.1 0.1 352 414 415 467 393 476 0.75 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_50 - 95 HTH_Tnp_ISL3 PF13542.1 52 2.2e-07 22.1 0.0 1 1 1.2e-08 3.4e-07 21.5 0.0 10 50 4 45 3 47 0.95 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_19 - 468 HTH_Tnp_ISL3 PF13542.1 52 1.9e-05 15.9 0.7 1 2 1.8e-05 0.0005 11.4 0.3 19 51 18 51 13 52 0.93 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_19 - 468 HTH_Tnp_ISL3 PF13542.1 52 1.9e-05 15.9 0.7 2 2 0.016 0.45 1.9 0.0 40 51 109 120 106 121 0.83 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_50 - 95 MerR PF00376.18 38 2.3e-05 16.0 0.0 1 1 8.6e-07 4.8e-05 15.0 0.0 1 21 24 44 24 45 0.91 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 AAA_33 PF13671.1 143 0.00037 12.5 0.1 1 2 0.0085 0.48 2.4 0.0 4 19 35 50 33 121 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_33 PF13671.1 143 0.00037 12.5 0.1 2 2 0.00025 0.014 7.3 0.0 3 33 326 356 325 398 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_24 - 258 MTS PF05175.9 170 2.1e-06 19.3 0.0 1 1 7.2e-08 4e-06 18.4 0.0 33 103 108 177 99 195 0.88 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_21 - 492 RNA_helicase PF00910.17 107 0.00037 12.8 0.2 1 2 0.0033 0.18 4.1 0.0 3 22 35 54 33 65 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 RNA_helicase PF00910.17 107 0.00037 12.8 0.2 2 2 0.00092 0.051 5.9 0.0 2 22 326 346 325 380 0.79 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_37 - 325 AAA_2 PF07724.9 171 2.9e-06 19.4 0.0 1 1 1.2e-07 6.9e-06 18.1 0.0 6 131 32 152 30 181 0.85 # 34094 # 35068 # 1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.533 1_24 - 258 Methyltransf_23 PF13489.1 161 4.6e-06 18.5 0.0 1 1 1.2e-07 6.5e-06 18.0 0.0 9 93 93 187 85 237 0.73 # 23355 # 24128 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.304 1_39 - 338 Eno-Rase_NADH_b PF12242.3 78 3.8e-06 18.8 0.1 1 1 1.3e-07 7.3e-06 17.9 0.1 33 66 52 83 45 93 0.80 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_21 - 492 NTPase_1 PF03266.10 168 4.7e-05 15.2 2.1 1 2 0.044 2.4 -0.1 0.0 1 19 32 50 32 62 0.83 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 NTPase_1 PF03266.10 168 4.7e-05 15.2 2.1 2 2 1.7e-05 0.00096 11.0 1.0 1 26 324 349 324 490 0.62 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_10 - 98 DDE_Tnp_IS1 PF03400.8 131 1.3e-48 156.5 0.2 1 1 2.6e-50 1.4e-48 156.4 0.2 35 131 1 97 1 97 0.99 # 8116 # 8409 # 1 # ID=1_10;partial=00;start_type=GTG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.541 1_9 - 92 zinc_ribbon_5 PF13719.1 37 4e-06 18.5 2.8 1 1 5.3e-07 1e-05 17.2 2.8 3 36 6 40 5 41 0.83 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 zinc_ribbon_5 PF13719.1 37 6.4e-06 17.9 2.9 1 1 9.7e-07 1.8e-05 16.4 2.9 3 36 6 40 5 41 0.83 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_26 - 514 zinc_ribbon_5 PF13719.1 37 0.0025 9.6 3.9 1 2 0.0012 0.022 6.5 0.1 1 12 73 84 73 87 0.82 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 zinc_ribbon_5 PF13719.1 37 0.0025 9.6 3.9 2 2 0.015 0.29 3.0 0.0 5 14 96 105 95 113 0.81 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_15 - 235 DDE_Tnp_IS240 PF13610.1 140 1.2e-53 172.9 0.1 1 1 6e-55 1.7e-53 172.5 0.1 4 139 75 212 73 213 0.99 # 13868 # 14572 # -1 # ID=1_15;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_49 - 268 DDE_Tnp_IS240 PF13610.1 140 2.8e-10 32.4 0.2 1 1 1.6e-11 4.3e-10 31.8 0.2 2 139 110 251 109 252 0.88 # 44610 # 45413 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_50 - 95 HTH_26 PF13443.1 63 8.3e-05 14.9 0.0 1 1 2.8e-06 0.00016 14.0 0.0 6 32 18 44 16 50 0.90 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 1 3 8e-05 0.0045 8.6 0.0 3 31 32 60 30 100 0.90 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 2 3 0.00051 0.028 6.0 0.1 3 23 324 344 322 352 0.89 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 PduV-EutP PF10662.4 143 1.4e-06 19.9 1.2 3 3 0.0082 0.46 2.1 0.0 40 72 431 463 420 484 0.69 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 KAP_NTPase PF07693.9 325 0.00012 13.2 1.8 1 2 0.00056 0.031 5.3 0.0 23 47 33 57 26 143 0.77 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 KAP_NTPase PF07693.9 325 0.00012 13.2 1.8 2 2 0.00018 0.01 6.9 0.0 23 42 325 344 319 398 0.87 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_17 - 181 HTH_17 PF12728.2 51 9.1e-07 21.2 0.0 1 1 6.2e-08 1.7e-06 20.3 0.0 2 27 4 29 4 37 0.92 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_50 - 95 HTH_17 PF12728.2 51 2e-06 20.1 0.1 1 1 1.6e-07 4.6e-06 19.0 0.0 2 23 23 44 22 53 0.93 # 45461 # 45745 # -1 # ID=1_50;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.526 1_26 - 514 Zn-ribbon_8 PF09723.5 42 0.00015 13.8 7.4 1 2 0.00023 0.013 7.6 5.0 7 35 76 102 75 106 0.81 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_26 - 514 Zn-ribbon_8 PF09723.5 42 0.00015 13.8 7.4 2 2 0.00078 0.044 5.9 0.0 8 24 450 466 437 470 0.75 # 25527 # 27068 # -1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.555 1_9 - 92 Zn_Tnp_IS1595 PF12760.2 46 5.8e-05 15.0 2.1 1 1 3.8e-06 0.00011 14.2 2.1 21 46 8 38 4 38 0.79 # 7712 # 7987 # 1 # ID=1_9;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_42 - 92 Zn_Tnp_IS1595 PF12760.2 46 9.7e-05 14.3 2.3 1 1 6.8e-06 0.00019 13.4 2.3 21 46 8 38 5 38 0.74 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_17 - 181 HTH_11 PF08279.7 55 0.00013 13.7 0.0 1 1 6.2e-06 0.00035 12.4 0.0 15 37 3 25 1 26 0.91 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_47 - 308 DDE_Tnp_1_5 PF13737.1 112 2.4e-48 155.1 0.1 1 2 2e-48 3.7e-47 151.3 0.0 1 112 19 130 19 130 0.96 # 42579 # 43502 # -1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_47 - 308 DDE_Tnp_1_5 PF13737.1 112 2.4e-48 155.1 0.1 2 2 0.094 1.8 0.9 0.0 42 68 263 291 234 297 0.82 # 42579 # 43502 # -1 # ID=1_47;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.541 1_12 - 226 DDE_Tnp_1_5 PF13737.1 112 5.1e-47 150.8 0.1 1 1 7.3e-48 1.4e-46 149.4 0.0 1 112 19 130 19 130 0.96 # 10248 # 10925 # 1 # ID=1_12;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.509 1_25 - 279 DDE_Tnp_1_5 PF13737.1 112 1.2e-40 130.3 0.0 1 1 3.9e-41 7.2e-40 127.8 0.0 10 112 1 103 1 103 0.95 # 24454 # 25290 # -1 # ID=1_25;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.581 1_17 - 181 UPF0122 PF04297.9 101 1.6e-07 23.4 1.3 1 3 2e-08 1.1e-06 20.7 0.0 33 89 3 64 1 76 0.78 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_17 - 181 UPF0122 PF04297.9 101 1.6e-07 23.4 1.3 2 3 0.088 4.9 -0.6 0.4 55 79 74 99 62 121 0.55 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_17 - 181 UPF0122 PF04297.9 101 1.6e-07 23.4 1.3 3 3 0.03 1.7 0.9 0.3 44 83 94 134 83 156 0.66 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 1_21 - 492 AAA_10 PF12846.2 304 2.4e-05 15.9 4.7 1 2 0.00068 0.038 5.4 0.0 6 22 35 51 33 67 0.80 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 AAA_10 PF12846.2 304 2.4e-05 15.9 4.7 2 2 1.7e-05 0.00095 10.7 0.5 4 118 325 478 322 489 0.76 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_29 - 292 HTH_20 PF12840.2 61 9.7e-05 14.3 0.4 1 2 0.00018 0.01 7.8 0.1 20 57 16 54 4 58 0.79 # 28903 # 29778 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.602 1_29 - 292 HTH_20 PF12840.2 61 9.7e-05 14.3 0.4 2 2 0.0024 0.13 4.2 0.0 20 43 163 190 157 194 0.81 # 28903 # 29778 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.602 1_21 - 492 Dynamin_N PF00350.18 168 0.0059 8.5 17.3 1 2 0.0077 0.43 2.4 11.6 1 86 33 234 33 305 0.68 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_21 - 492 Dynamin_N PF00350.18 168 0.0059 8.5 17.3 2 2 0.00049 0.027 6.3 0.3 1 111 325 437 325 487 0.51 # 19581 # 21056 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.399 1_36 - 223 AAA_13 PF13166.1 712 0.0015 9.1 20.8 1 2 8.6e-07 4.8e-05 14.0 12.3 333 457 6 132 3 140 0.91 # 33255 # 33923 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 1_36 - 223 AAA_13 PF13166.1 712 0.0015 9.1 20.8 2 2 0.012 0.67 0.3 1.2 366 397 169 201 149 222 0.35 # 33255 # 33923 # -1 # ID=1_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.501 1_42 - 92 DUF2387 PF09526.5 71 9.8e-05 14.4 0.2 1 1 2.3e-06 0.00013 14.0 0.2 10 47 7 47 5 72 0.76 # 38234 # 38509 # 1 # ID=1_42;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_3 - 402 AAA_31 PF13614.1 157 5.3e-05 15.3 0.0 1 1 5.5e-06 0.00031 12.8 0.0 108 147 235 273 230 279 0.86 # 1704 # 2909 # 1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.457 1_27 - 280 Pterin_bind PF00809.17 210 1.4e-58 189.7 0.0 1 1 3e-60 1.7e-58 189.5 0.0 1 210 7 216 7 216 0.98 # 27473 # 28312 # -1 # ID=1_27;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.617 1_39 - 338 KR PF08659.5 181 7.1e-14 43.9 0.0 1 1 1.8e-15 9.8e-14 43.5 0.0 3 174 60 236 59 242 0.81 # 35785 # 36798 # -1 # ID=1_39;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.509 1_19 - 468 FaeA PF04703.7 62 0.00012 14.4 0.1 1 1 4.4e-06 0.00024 13.4 0.1 13 56 25 68 11 72 0.82 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_5 - 424 DNA_pol_lambd_f PF10391.4 52 3.2e-05 15.6 0.2 1 1 4.5e-06 0.00025 12.7 0.0 5 29 182 206 178 217 0.87 # 3965 # 5236 # -1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.535 1_49 - 268 HTH_21 PF13276.1 60 2.3e-14 45.3 2.0 1 1 8.1e-16 2.3e-14 45.3 2.0 3 55 27 78 24 86 0.91 # 44610 # 45413 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.550 1_19 - 468 HTH_21 PF13276.1 60 0.00012 14.1 0.0 1 1 4.4e-06 0.00012 14.1 0.0 29 59 99 129 76 130 0.80 # 16996 # 18399 # -1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.518 1_17 - 181 Phage_AlpA PF05930.7 51 0.00023 13.0 0.0 1 1 7.6e-06 0.00043 12.1 0.0 4 28 4 28 1 30 0.90 # 15457 # 15999 # 1 # ID=1_17;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.378 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/99ac7f89-3a17-469d-aaf6-4263bd1d1e73 # Target file: checkm_output/bins/pm1082/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1082/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/99ac7f89-3a17-469d-aaf6-4263bd1d1e73 checkm_output/bins/pm1082/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:34:20 2017 # [ok]