# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_4 - 250 Rep_3 PF01051.16 222 5.8e-63 201.7 3.7 1 1 8.2e-64 6.6e-63 201.5 3.7 2 222 23 239 22 239 0.95 # 1497 # 2246 # -1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.304 1_3 - 141 MerR_1 PF13411.1 69 1.2e-06 17.6 0.2 1 1 4.2e-07 3.3e-06 16.2 0.0 2 30 5 33 4 50 0.88 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 NUMOD1 PF07453.8 37 5.7e-07 18.7 0.0 1 1 1.8e-07 1.4e-06 17.5 0.0 18 36 5 23 4 24 0.95 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_3 PF01381.17 55 3.5e-05 13.0 0.2 1 1 9.4e-06 7.5e-05 12.0 0.2 11 30 5 24 1 25 0.88 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_23 PF13384.1 50 2.4e-06 16.6 0.4 1 1 5.7e-07 4.5e-06 15.7 0.4 19 38 5 24 2 26 0.92 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_28 PF13518.1 52 2.2e-05 13.9 0.1 1 1 5.1e-06 4.1e-05 13.0 0.1 12 33 3 24 1 28 0.91 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_4 - 250 RPA PF10134.4 229 6.8e-09 24.6 0.4 1 1 1.1e-09 9e-09 24.2 0.4 47 212 43 199 26 213 0.81 # 1497 # 2246 # -1 # ID=1_4;partial=00;start_type=TTG;rbs_motif=AATAA;rbs_spacer=7bp;gc_cont=0.304 1_3 - 141 MerR PF00376.18 38 2.3e-06 16.5 0.1 1 1 4.6e-07 3.7e-06 15.9 0.1 1 25 5 29 5 37 0.91 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_17 PF12728.2 51 3.4e-08 23.1 0.0 1 1 9.8e-09 7.8e-08 21.9 0.0 3 30 5 31 4 49 0.89 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_11 PF08279.7 55 8.2e-05 11.7 1.1 1 2 9.7e-05 0.00078 8.5 0.2 16 38 4 26 1 26 0.86 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 1_3 - 141 HTH_11 PF08279.7 55 8.2e-05 11.7 1.1 2 2 0.021 0.17 1.1 0.0 35 49 104 118 103 120 0.91 # 1075 # 1497 # -1 # ID=1_3;partial=00;start_type=ATG;rbs_motif=AATAA;rbs_spacer=13bp;gc_cont=0.348 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/83fba576-2558-40fa-ad6f-abefc5731e8a # Target file: checkm_output/bins/pm1062/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1062/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/83fba576-2558-40fa-ad6f-abefc5731e8a checkm_output/bins/pm1062/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:33:42 2017 # [ok]