# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_37 - 332 ATP-synt_ab PF00006.20 215 0.00042 12.4 0.0 1 1 8.8e-06 0.00067 11.7 0.0 16 62 159 205 151 247 0.86 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 KaiC PF06745.8 227 0.00013 13.6 0.0 1 1 3e-06 0.00023 12.8 0.0 16 53 155 190 148 240 0.77 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 92 Zn_Tnp_IS1 PF03811.8 36 6.2e-24 75.8 4.5 1 1 1.6e-25 1.2e-23 74.9 4.5 1 36 1 36 1 36 0.99 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_19 - 397 K_oxygenase PF13434.1 341 1.7e-05 16.3 0.0 1 2 2.1e-06 0.00016 13.1 0.0 130 231 52 144 32 156 0.80 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_19 - 397 K_oxygenase PF13434.1 341 1.7e-05 16.3 0.0 2 2 0.014 1.1 0.6 0.0 139 160 180 201 150 212 0.63 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_37 - 332 ABC_tran PF00005.22 137 1.2e-06 21.4 0.0 1 1 5e-08 1.9e-06 20.8 0.0 6 45 153 192 150 257 0.87 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_44 - 867 ABC_tran PF00005.22 137 0.00052 12.9 0.0 1 1 4.6e-05 0.0018 11.2 0.0 14 38 494 518 481 550 0.83 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_58 - 190 HTH_22 PF13309.1 64 3.9e-06 19.2 0.1 1 1 1.5e-07 1.1e-05 17.7 0.1 45 62 168 185 166 187 0.92 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 2_12 - 422 HHH_5 PF14520.1 60 2.1e-07 23.6 0.6 1 1 7.4e-08 5.7e-06 19.0 0.6 8 55 181 278 177 282 0.65 # 5232 # 6497 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_22 - 71 DUF2116 PF09889.4 59 0.0013 11.1 5.7 1 1 0.00073 0.056 5.9 5.7 6 35 14 54 12 60 0.75 # 16978 # 17190 # 1 # ID=1_22;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.592 1_37 - 332 Sigma54_activat PF00158.21 168 6.6e-06 18.2 0.0 1 1 3.1e-07 1.2e-05 17.4 0.0 14 54 150 190 138 213 0.82 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 Sigma54_activat PF00158.21 168 0.00013 14.0 0.4 1 1 9.5e-06 0.00036 12.5 0.4 8 130 480 600 473 606 0.79 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 FtsK_SpoIIIE PF01580.13 205 6.6e-07 21.5 0.0 1 1 5.1e-08 1.3e-06 20.5 0.0 38 64 158 184 139 191 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_44 - 867 FtsK_SpoIIIE PF01580.13 205 9e-06 17.8 0.0 1 1 8.1e-07 2.1e-05 16.6 0.0 21 62 462 515 445 522 0.82 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_9 - 510 FtsK_SpoIIIE PF01580.13 205 0.0005 12.1 0.0 1 1 3.4e-05 0.00087 11.3 0.0 39 59 124 147 95 153 0.78 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_18 - 202 HTH_38 PF13936.1 44 3.8e-08 25.4 1.0 1 1 3.5e-09 1.3e-07 23.6 0.0 15 44 168 197 160 197 0.93 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_58 - 190 HTH_38 PF13936.1 44 8.6e-06 17.8 0.0 1 1 7.3e-07 2.8e-05 16.2 0.0 4 39 148 184 145 185 0.93 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 SpoIIID PF12116.3 82 4.6e-05 15.9 0.1 1 2 0.038 2.9 0.5 0.0 33 55 8 30 4 37 0.84 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 SpoIIID PF12116.3 82 4.6e-05 15.9 0.1 2 2 5.8e-06 0.00045 12.7 0.0 11 42 157 188 149 189 0.82 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_16 - 175 FAD_oxidored PF12831.2 428 6.2e-08 24.6 3.9 1 1 1e-09 8.1e-08 24.2 3.9 1 41 100 139 100 159 0.82 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_37 - 332 MobB PF03205.9 140 6.8e-06 18.4 1.9 1 1 1.5e-07 1.2e-05 17.6 0.3 2 39 160 196 159 201 0.83 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_19 - 397 Pyr_redox_3 PF13738.1 203 3.9e-14 45.7 0.0 1 2 6.8e-09 2.6e-07 23.4 0.0 115 201 54 139 12 141 0.81 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_19 - 397 Pyr_redox_3 PF13738.1 203 3.9e-14 45.7 0.0 2 2 6.3e-08 2.4e-06 20.2 0.0 89 147 152 207 144 269 0.81 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_16 - 175 Pyr_redox_3 PF13738.1 203 1.3e-05 17.9 0.1 1 1 4e-07 1.5e-05 17.6 0.1 164 199 95 130 37 133 0.82 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_58 - 190 NanE PF04131.9 192 0.00016 13.2 0.0 1 2 0.00013 0.0098 7.4 0.0 47 79 9 41 1 69 0.76 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 NanE PF04131.9 192 0.00016 13.2 0.0 2 2 0.0018 0.14 3.6 0.0 58 141 83 161 75 177 0.70 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_16 - 175 NAD_binding_7 PF13241.1 103 0.00018 14.3 0.3 1 1 3.9e-06 0.0003 13.6 0.3 9 38 100 129 96 159 0.90 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_37 - 332 Myosin_head PF00063.16 689 0.00012 12.7 0.0 1 1 2.2e-06 0.00017 12.2 0.0 84 110 157 183 147 209 0.90 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_58 - 190 TetR_N PF00440.18 47 0.00019 13.6 0.0 1 1 4.9e-06 0.00038 12.7 0.0 17 36 166 185 164 185 0.94 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_37 - 332 AAA_19 PF13245.1 76 0.00049 12.4 0.1 1 1 2.8e-05 0.0011 11.3 0.1 5 48 153 191 149 224 0.78 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 AAA_19 PF13245.1 76 0.0018 10.6 3.7 1 2 0.00056 0.022 7.2 0.2 2 75 485 551 484 552 0.75 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 AAA_19 PF13245.1 76 0.0018 10.6 3.7 2 2 0.027 1.1 1.7 0.0 17 32 706 721 705 731 0.82 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_6 - 239 CbiA PF01656.18 195 2.1e-06 19.8 0.7 1 2 0.00041 0.032 6.1 0.1 1 19 3 21 3 24 0.89 # 1947 # 2663 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_6 - 239 CbiA PF01656.18 195 2.1e-06 19.8 0.7 2 2 6.6e-06 0.0005 12.0 0.0 110 165 89 142 33 168 0.77 # 1947 # 2663 # -1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.416 1_18 - 202 Sigma70_r4_2 PF08281.7 54 1e-06 20.8 0.0 1 1 4e-08 3.1e-06 19.2 0.0 17 44 165 191 165 199 0.86 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_62 - 235 Rep_3 PF01051.16 222 5.1e-44 143.0 0.4 1 1 7.6e-46 5.8e-44 142.8 0.4 2 213 3 222 2 228 0.93 # 47455 # 48159 # -1 # ID=1_62;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.444 1_24 - 235 rve PF00665.21 120 1.3e-13 43.6 0.1 1 2 0.015 1.1 1.9 0.0 78 102 27 49 6 54 0.84 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_24 - 235 rve PF00665.21 120 1.3e-13 43.6 0.1 2 2 3.2e-14 2.4e-12 39.6 0.0 9 119 75 182 70 183 0.89 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_37 - 332 AAA_23 PF13476.1 202 0.00034 13.5 0.0 1 1 2.2e-05 0.00055 12.8 0.0 19 39 158 178 105 184 0.91 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_44 - 867 AAA_23 PF13476.1 202 0.0037 10.1 0.0 1 1 0.00014 0.0037 10.1 0.0 22 39 494 511 464 521 0.84 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_43 - 238 AAA_23 PF13476.1 202 0.052 6.4 14.2 1 1 0.00025 0.0065 9.3 1.9 97 196 67 185 58 216 0.60 # 31469 # 32182 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_37 - 332 Zeta_toxin PF06414.7 201 1.2e-06 20.3 0.0 1 1 2.7e-08 2.1e-06 19.5 0.0 12 51 154 193 145 204 0.86 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 AAA_30 PF13604.1 196 1.6e-53 173.7 7.6 1 1 1.5e-54 5.9e-53 171.9 6.4 1 192 477 660 477 663 0.97 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 AAA_30 PF13604.1 196 0.00012 14.3 0.1 1 2 4.7e-05 0.0018 10.4 0.1 11 51 151 190 145 197 0.80 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_30 PF13604.1 196 0.00012 14.3 0.1 2 2 0.024 0.91 1.6 0.0 121 178 204 258 191 272 0.77 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_24 - 235 HTH_Tnp_1 PF01527.15 76 0.00019 13.9 0.3 1 1 5.4e-06 0.00041 12.9 0.3 4 51 6 58 4 63 0.79 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_18 - 202 GerE PF00196.14 58 2.3e-05 16.3 0.0 1 1 5.1e-07 3.9e-05 15.5 0.0 11 35 166 190 165 201 0.88 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 510 TraG-D_C PF12696.2 128 1e-21 69.7 0.0 1 1 2.2e-23 1.7e-21 69.0 0.0 1 127 350 471 350 472 0.80 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_24 - 235 DDE_3 PF13358.1 146 0.00033 13.0 0.0 1 1 1.3e-05 0.001 11.4 0.0 32 90 82 141 59 146 0.87 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_58 - 190 Sigma70_r4 PF04545.11 50 0.00014 13.7 0.0 1 2 0.028 2.2 0.3 0.0 31 40 148 157 144 160 0.85 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 Sigma70_r4 PF04545.11 50 0.00014 13.7 0.0 2 2 1.5e-05 0.0012 10.8 0.0 18 37 163 182 148 188 0.88 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_16 - 175 Thi4 PF01946.12 230 4.6e-05 15.1 0.3 1 1 9.1e-07 7e-05 14.5 0.3 19 70 100 150 95 159 0.88 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_10 - 1079 AAA PF00004.24 132 2.6e-06 20.2 0.9 1 1 1.3e-07 9.9e-06 18.3 0.1 4 111 500 600 497 612 0.73 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 Parvo_NS1 PF01057.12 272 0.00066 11.1 0.0 1 1 1.4e-05 0.0011 10.4 0.0 104 138 148 182 140 188 0.90 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 Herpes_Helicase PF02689.9 819 1.7e-05 15.3 0.0 1 2 0.0014 0.11 2.7 0.0 173 208 539 574 515 584 0.81 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 Herpes_Helicase PF02689.9 819 1.7e-05 15.3 0.0 2 2 9.3e-06 0.00071 9.9 0.0 739 782 850 894 831 914 0.80 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_58 - 190 MRP-L20 PF12824.2 164 2.5e-06 20.1 0.0 1 1 4.5e-08 3.4e-06 19.6 0.0 70 123 133 184 116 189 0.78 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_10 - 1079 Torsin PF06309.6 127 1.6e-05 17.3 0.0 1 1 6.1e-07 4.7e-05 15.8 0.0 19 85 460 526 452 537 0.83 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_12 - 152 MerR_1 PF13411.1 69 2.7e-20 64.5 0.0 1 1 1.9e-21 4.8e-20 63.7 0.0 2 67 9 75 8 77 0.96 # 9267 # 9722 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 1_20 - 122 MerR_1 PF13411.1 69 3.9e-13 41.6 0.0 1 1 2.2e-14 5.7e-13 41.1 0.0 1 68 4 72 4 73 0.97 # 16314 # 16679 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 1_58 - 190 MerR_1 PF13411.1 69 0.00011 14.5 0.4 1 2 0.022 0.55 2.7 0.0 45 66 78 99 76 102 0.82 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 MerR_1 PF13411.1 69 0.00011 14.5 0.4 2 2 0.00019 0.005 9.2 0.1 1 23 166 188 166 189 0.94 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_37 - 332 cobW PF02492.14 178 1.7e-06 20.1 0.0 1 1 4.1e-08 3.1e-06 19.2 0.0 3 45 161 202 159 257 0.77 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_16 PF13191.1 185 5.2e-07 22.3 0.0 1 1 1.7e-08 1.3e-06 21.0 0.0 24 61 158 195 149 274 0.82 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_22 PF13401.1 131 2.1e-07 23.7 0.0 1 1 1.8e-08 4.7e-07 22.6 0.0 3 54 157 202 153 241 0.74 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_44 - 867 AAA_22 PF13401.1 131 8.1e-05 15.3 0.0 1 1 7.5e-05 0.0019 10.9 0.0 5 28 492 515 489 549 0.85 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_10 - 1079 AAA_22 PF13401.1 131 0.00049 12.8 0.2 1 1 0.00022 0.0057 9.3 0.2 4 125 494 598 490 603 0.81 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 AAA_29 PF13555.1 62 0.00077 11.6 0.0 1 1 2.3e-05 0.0018 10.4 0.0 19 43 157 178 145 188 0.75 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_19 - 397 Pyr_redox PF00070.22 80 4.8e-16 51.5 0.1 1 1 3.7e-17 1.4e-15 50.0 0.1 1 72 107 177 107 186 0.91 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_16 - 175 Pyr_redox PF00070.22 80 1e-05 18.5 1.5 1 1 5.1e-07 2e-05 17.6 1.5 2 31 101 130 100 132 0.95 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 175 HI0933_like PF03486.9 409 5e-06 17.7 2.8 1 1 1.7e-07 6.6e-06 17.3 2.8 2 33 100 131 99 139 0.91 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_19 - 397 HI0933_like PF03486.9 409 3.9e-05 14.7 0.0 1 1 2e-06 7.7e-05 13.8 0.0 83 164 121 198 116 214 0.85 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_43 - 238 Mnd1 PF03962.10 188 0.0013 11.0 9.6 1 2 0.00013 0.01 8.0 0.5 105 139 34 64 20 86 0.71 # 31469 # 32182 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_43 - 238 Mnd1 PF03962.10 188 0.0013 11.0 9.6 2 2 0.00029 0.022 6.9 3.0 66 126 155 217 107 222 0.84 # 31469 # 32182 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_58 - 190 HTH_32 PF13565.1 77 8.4e-07 22.3 0.5 1 2 0.081 3.1 1.3 0.0 24 51 36 68 15 81 0.66 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 HTH_32 PF13565.1 77 8.4e-07 22.3 0.5 2 2 2.1e-07 8.1e-06 19.2 0.2 7 76 127 185 121 186 0.71 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_24 - 235 HTH_32 PF13565.1 77 1e-06 22.1 0.2 1 1 1.1e-07 4.3e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_18 - 202 HTH_23 PF13384.1 50 9.3e-08 24.2 0.2 1 1 4.8e-09 9.3e-08 24.2 0.2 10 42 166 198 160 201 0.92 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_24 - 235 HTH_23 PF13384.1 50 4.7e-06 18.8 0.7 1 2 0.063 1.2 1.6 0.0 7 27 11 35 7 36 0.69 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_24 - 235 HTH_23 PF13384.1 50 4.7e-06 18.8 0.7 2 2 7.4e-06 0.00014 14.0 0.1 28 42 41 55 40 62 0.87 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_58 - 190 HTH_23 PF13384.1 50 9.9e-06 17.7 0.0 1 1 1.6e-06 3.1e-05 16.1 0.0 12 37 160 185 151 188 0.84 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_25 - 92 HTH_23 PF13384.1 50 1.7e-05 17.0 0.0 1 1 1.4e-06 2.8e-05 16.3 0.0 7 40 53 86 51 90 0.93 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_58 - 190 HTH_7 PF02796.10 45 8.4e-18 56.6 0.1 1 1 1.1e-18 4.2e-17 54.4 0.1 1 44 144 188 144 189 0.98 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_18 - 202 HTH_7 PF02796.10 45 1.2e-05 17.7 0.0 1 1 8.7e-07 3.4e-05 16.3 0.0 13 38 165 190 156 190 0.93 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_25 - 92 zinc_ribbon_4 PF13717.1 36 4.4e-05 15.7 4.1 1 1 1.6e-06 0.00012 14.3 4.1 3 35 6 39 5 40 0.86 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_18 - 202 HTH_29 PF13551.1 112 3.2e-05 16.6 0.5 1 2 0.014 0.55 3.0 0.0 51 88 43 87 25 101 0.62 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_18 - 202 HTH_29 PF13551.1 112 3.2e-05 16.6 0.5 2 2 3.8e-05 0.0015 11.3 0.2 4 36 166 197 165 200 0.89 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_58 - 190 HTH_29 PF13551.1 112 0.00039 13.1 3.1 1 2 0.0022 0.084 5.6 0.3 37 71 129 162 122 166 0.75 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 HTH_29 PF13551.1 112 0.00039 13.1 3.1 2 2 0.00028 0.011 8.5 0.0 6 32 159 185 154 188 0.80 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_30 - 267 TIGR03413 TIGR03413 248 3.3e-06 18.8 0.0 1 1 6.7e-08 5.2e-06 18.2 0.0 30 164 93 240 71 242 0.66 # 21575 # 22375 # -1 # ID=1_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.558 1_16 - 175 GIDA PF01134.17 392 1.2e-07 23.4 3.8 1 1 2.3e-09 1.8e-07 22.8 3.8 1 52 100 153 100 160 0.88 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 175 NAD_binding_8 PF13450.1 68 4.2e-06 19.3 1.0 1 1 1.1e-07 8.2e-06 18.4 1.0 1 35 103 136 103 157 0.90 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_24 - 235 DDE_Tnp_IS66 PF03050.9 271 8.2e-13 40.6 0.3 1 1 1.4e-14 1.1e-12 40.3 0.3 5 132 10 144 6 174 0.87 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_37 - 332 Arch_ATPase PF01637.13 234 6.7e-06 18.4 0.0 1 1 1.6e-07 1.2e-05 17.6 0.0 15 68 155 205 149 226 0.87 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 PhoH PF02562.11 205 2.5e-09 29.2 4.8 1 2 9.6e-07 3.7e-05 15.5 0.4 5 39 478 514 475 536 0.80 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 PhoH PF02562.11 205 2.5e-09 29.2 4.8 2 2 3e-06 0.00012 13.9 0.1 120 162 562 605 553 635 0.82 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 PhoH PF02562.11 205 0.00024 12.9 0.0 1 1 1.1e-05 0.00043 12.1 0.0 14 45 153 184 143 210 0.79 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_13 - 264 SprT-like PF10263.4 157 3e-37 120.2 0.0 1 1 5.3e-39 4.1e-37 119.8 0.0 1 150 12 236 12 262 0.92 # 6648 # 7439 # 1 # ID=2_13;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_37 - 332 ResIII PF04851.10 184 4.8e-06 19.0 0.0 1 1 9.8e-08 7.5e-06 18.4 0.0 22 61 148 196 104 202 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_16 - 175 Trp_halogenase PF04820.9 454 0.00066 10.8 2.9 1 1 1.1e-05 0.00085 10.5 2.9 1 48 100 144 100 152 0.76 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_9 - 510 TrwB_AAD_bind PF10412.4 386 8.1e-119 389.1 0.0 1 1 3.7e-120 9.5e-119 388.9 0.0 1 385 112 490 112 491 0.95 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_44 - 867 TrwB_AAD_bind PF10412.4 386 7.1e-07 20.6 1.6 1 2 1.5e-06 3.8e-05 14.9 0.0 16 51 492 527 484 536 0.92 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_44 - 867 TrwB_AAD_bind PF10412.4 386 7.1e-07 20.6 1.6 2 2 0.0042 0.11 3.5 0.0 102 168 741 806 720 812 0.79 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_37 - 332 TrwB_AAD_bind PF10412.4 386 1.1e-05 16.8 0.1 1 1 6.4e-07 1.6e-05 16.1 0.1 14 49 157 191 150 202 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_18 PF13238.1 129 3.6e-06 19.9 0.0 1 1 2e-07 7.5e-06 18.8 0.0 1 29 161 194 161 213 0.77 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 510 AAA_18 PF13238.1 129 9.9e-05 15.2 0.0 1 1 5.2e-06 0.0002 14.2 0.0 3 21 131 149 130 238 0.78 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 2_12 - 422 IMS_HHH PF11798.3 32 3.6e-07 22.6 0.0 1 1 1.4e-08 1e-06 21.2 0.0 4 32 171 199 168 199 0.85 # 5232 # 6497 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_37 - 332 GvpD PF07088.6 484 2e-06 18.9 0.0 1 1 3.9e-08 3e-06 18.3 0.0 10 89 158 241 150 262 0.76 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 92 HTH_Tnp_IS1 PF12759.2 46 1.6e-31 100.1 0.2 1 1 3.2e-33 2.4e-31 99.5 0.2 1 46 43 88 43 88 0.99 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_37 - 332 DUF258 PF03193.11 161 8.5e-05 14.3 0.0 1 1 2e-06 0.00016 13.5 0.0 29 61 151 184 129 224 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 510 DUF87 PF01935.12 229 8.5e-08 24.8 0.0 1 1 3.4e-09 1.3e-07 24.2 0.0 10 68 116 170 109 262 0.85 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 332 DUF87 PF01935.12 229 2e-06 20.3 0.0 1 1 9.7e-08 3.7e-06 19.4 0.0 9 61 144 195 138 196 0.78 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_18 - 202 HTH_28 PF13518.1 52 2e-08 26.7 0.4 1 1 2.4e-09 4.7e-08 25.5 0.4 4 38 165 199 165 201 0.92 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_58 - 190 HTH_28 PF13518.1 52 4.3e-05 16.1 0.0 1 1 9.7e-06 0.00019 14.0 0.0 13 32 166 185 159 188 0.87 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_24 - 235 HTH_28 PF13518.1 52 4.5e-05 16.0 1.2 1 1 1e-05 0.0002 14.0 1.2 22 36 40 54 13 55 0.76 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_25 - 92 HTH_28 PF13518.1 52 6.8e-05 15.4 0.0 1 1 5.4e-06 0.0001 14.8 0.0 4 35 55 86 53 90 0.90 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_12 - 152 MerR-DNA-bind PF09278.6 65 2.6e-21 68.4 1.4 1 1 1.2e-22 4.7e-21 67.6 1.1 1 65 51 113 51 113 0.95 # 9267 # 9722 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 1_20 - 122 MerR-DNA-bind PF09278.6 65 0.00015 14.8 6.6 1 1 6.7e-06 0.00026 14.0 6.6 1 64 47 108 47 109 0.80 # 16314 # 16679 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 1_58 - 190 HTH_24 PF13412.1 48 1.7e-05 16.7 0.0 1 2 0.074 2.8 0.0 0.0 30 46 74 90 69 91 0.88 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_58 - 190 HTH_24 PF13412.1 48 1.7e-05 16.7 0.0 2 2 3.9e-06 0.00015 13.7 0.0 9 38 157 186 157 188 0.92 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_18 - 202 HTH_24 PF13412.1 48 1.9e-05 16.6 0.0 1 1 1e-06 4e-05 15.6 0.0 16 40 172 196 168 196 0.89 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_37 - 332 Sigma54_activ_2 PF14532.1 138 1.8e-06 20.6 0.0 1 1 5e-08 3.9e-06 19.5 0.0 14 65 151 202 145 212 0.92 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_18 - 202 HTH_10 PF04967.7 53 0.00033 12.8 0.0 1 1 1.3e-05 0.001 11.3 0.0 27 46 177 196 173 199 0.86 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_19 - 397 TIGR01292 TIGR01292 300 8.8e-17 53.0 0.0 1 1 3.7e-18 1.4e-16 52.3 0.0 143 296 107 260 48 262 0.82 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_16 - 175 TIGR01292 TIGR01292 300 4.8e-05 14.5 1.2 1 1 1.9e-06 7.3e-05 13.9 1.2 2 39 100 137 99 143 0.91 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_37 - 332 MMR_HSR1 PF01926.18 116 0.00034 13.2 0.0 1 1 7.1e-06 0.00055 12.5 0.0 2 41 161 205 160 310 0.84 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 DEAD PF00270.24 169 2.3e-06 19.7 0.0 1 1 5.7e-08 4.4e-06 18.8 0.0 13 70 157 211 144 242 0.78 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_18 - 202 HTH_31 PF13560.1 64 0.0018 11.0 4.3 1 2 0.023 1.8 1.5 0.1 15 38 23 56 16 77 0.73 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_18 - 202 HTH_31 PF13560.1 64 0.0018 11.0 4.3 2 2 4.9e-05 0.0038 10.0 0.5 11 39 170 198 142 201 0.90 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_37 - 332 DUF2075 PF09848.4 352 7e-05 14.4 0.0 1 1 1.3e-06 0.0001 13.9 0.0 1 32 158 187 158 216 0.76 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_10 - 1079 UvrD_C_2 PF13538.1 104 1.9e-16 52.7 0.1 1 1 1e-17 8e-16 50.7 0.1 2 102 797 896 796 898 0.76 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 T2SE PF00437.15 272 2.4e-52 170.0 0.1 1 1 7.4e-54 2.8e-52 169.7 0.1 3 271 10 311 8 312 0.94 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 510 T2SE PF00437.15 272 0.00067 11.1 0.1 1 1 3.1e-05 0.0012 10.3 0.1 130 149 128 147 103 160 0.84 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 332 NACHT PF05729.7 166 6.8e-05 15.1 0.0 1 1 1.9e-06 0.00015 14.0 0.0 1 27 159 185 159 188 0.90 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 UPF0079 PF02367.12 123 4.7e-06 18.8 0.0 1 1 1.2e-07 9.4e-06 17.8 0.0 9 45 152 188 145 193 0.85 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_17 PF13207.1 121 0.00031 14.1 0.1 1 1 2.8e-05 0.00073 12.9 0.1 2 40 161 195 160 229 0.75 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 510 AAA_17 PF13207.1 121 0.00041 13.7 0.1 1 1 6.7e-05 0.0017 11.7 0.0 4 42 131 191 129 260 0.58 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_44 - 867 AAA_17 PF13207.1 121 0.00043 13.7 3.9 1 1 0.00023 0.0058 10.0 0.0 3 21 495 513 494 565 0.80 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_37 - 332 AAA_7 PF12775.2 272 7.6e-05 14.4 0.0 1 1 2.3e-06 0.00018 13.2 0.0 25 64 150 189 139 209 0.86 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 TIGR03346 TIGR03346 853 0.00011 12.8 0.0 1 1 2e-06 0.00015 12.3 0.0 598 641 161 204 149 238 0.89 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_16 - 175 FAD_binding_2 PF00890.19 417 1e-07 23.6 5.4 1 1 2e-09 1.5e-07 23.1 5.4 2 32 101 131 100 138 0.91 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_10 - 1079 Viral_helicase1 PF01443.13 234 5.3e-15 48.1 5.4 1 2 2.3e-08 1.7e-06 20.2 0.0 3 104 499 605 497 654 0.74 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 Viral_helicase1 PF01443.13 234 5.3e-15 48.1 5.4 2 2 3e-11 2.3e-09 29.6 0.5 157 234 818 899 774 899 0.74 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_37 - 332 Pox_A32 PF04665.7 241 7.7e-05 14.6 0.0 1 1 1.7e-06 0.00013 13.8 0.0 12 46 157 191 150 210 0.85 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_9 - 510 AAA_14 PF13173.1 128 9.5e-06 18.1 0.0 1 2 4.3e-06 0.00017 14.1 0.0 6 89 130 213 125 234 0.76 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_9 - 510 AAA_14 PF13173.1 128 9.5e-06 18.1 0.0 2 2 0.043 1.7 1.1 0.0 53 81 340 372 300 391 0.57 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 332 AAA_14 PF13173.1 128 0.00021 13.7 0.1 1 2 0.0044 0.17 4.3 0.0 64 96 135 165 98 166 0.69 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_14 PF13173.1 128 0.00021 13.7 0.1 2 2 6.3e-05 0.0024 10.3 0.0 2 35 158 191 157 213 0.80 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_18 - 202 HTH_Tnp_ISL3 PF13542.1 52 3.2e-05 15.7 0.2 1 1 1e-06 7.7e-05 14.4 0.2 29 51 175 197 166 198 0.85 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_12 - 152 MerR PF00376.18 38 7.6e-15 46.8 0.1 1 1 4e-16 1.5e-14 45.9 0.1 1 38 9 46 9 46 0.99 # 9267 # 9722 # -1 # ID=1_12;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.607 1_20 - 122 MerR PF00376.18 38 2.8e-07 22.6 0.1 1 1 1.1e-08 4.3e-07 22.0 0.1 2 38 6 42 5 42 0.89 # 16314 # 16679 # 1 # ID=1_20;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.672 1_37 - 332 AAA_33 PF13671.1 143 0.00028 13.3 0.0 1 1 5.9e-06 0.00045 12.6 0.0 2 26 161 188 160 256 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_18 - 202 CENP-B_N PF04218.8 53 0.00012 14.0 0.0 1 1 3.9e-06 0.0003 12.8 0.0 21 45 172 196 165 199 0.87 # 14455 # 15060 # 1 # ID=1_18;partial=00;start_type=TTG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.561 1_9 - 510 T4SS-DNA_transf PF02534.9 469 4.2e-12 37.8 0.0 1 1 7.9e-14 6.1e-12 37.3 0.0 263 426 313 472 297 500 0.74 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 332 RNA_helicase PF00910.17 107 1.5e-05 17.7 0.1 1 2 3.5e-06 0.00027 13.7 0.0 1 25 161 185 161 242 0.75 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 RNA_helicase PF00910.17 107 1.5e-05 17.7 0.1 2 2 0.027 2.1 1.2 0.1 69 100 290 322 281 328 0.78 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_37 - 332 AAA_2 PF07724.9 171 4.4e-06 19.2 0.0 1 1 1e-07 7.9e-06 18.4 0.0 3 54 158 204 156 216 0.89 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_16 - 175 AlaDh_PNT_C PF01262.16 168 3.2e-05 16.1 0.3 1 1 7.2e-07 5.5e-05 15.3 0.3 16 50 94 128 80 131 0.87 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_56 - 478 DNA_methylase PF00145.12 335 1.7e-79 259.8 0.0 1 1 4.4e-81 3.4e-79 258.8 0.0 1 331 96 457 96 460 0.86 # 39213 # 40646 # 1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=3-4bp;gc_cont=0.483 1_26 - 126 DDE_Tnp_IS1 PF03400.8 131 2.6e-76 246.5 1.5 1 1 7.4e-78 2.9e-76 246.4 1.5 7 131 1 125 1 125 1.00 # 19075 # 19452 # 1 # ID=1_26;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.540 1_55 - 89 DDE_Tnp_IS1 PF03400.8 131 7.1e-47 151.3 0.5 1 1 2e-48 7.8e-47 151.2 0.5 44 131 1 88 1 88 0.99 # 38842 # 39108 # -1 # ID=1_55;partial=00;start_type=TTG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.517 1_43 - 238 3HCDH_N PF02737.13 180 0.0012 11.1 2.0 1 2 0.00032 0.025 6.8 0.1 68 118 33 83 18 86 0.84 # 31469 # 32182 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_43 - 238 3HCDH_N PF02737.13 180 0.0012 11.1 2.0 2 2 0.0025 0.19 3.8 0.3 42 80 144 180 114 210 0.69 # 31469 # 32182 # -1 # ID=1_43;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.511 1_25 - 92 zinc_ribbon_5 PF13719.1 37 8.7e-06 17.9 2.9 1 1 3.2e-07 2.5e-05 16.4 2.9 3 36 6 40 5 41 0.83 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_19 - 397 Glyco_transf_4 PF13439.1 177 7.6e-05 15.0 0.1 1 1 1.7e-06 0.00013 14.2 0.1 13 39 112 138 109 172 0.84 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_24 - 235 DDE_Tnp_IS240 PF13610.1 140 1.3e-52 170.0 0.0 1 1 2.4e-54 1.8e-52 169.5 0.0 4 139 75 212 73 213 0.99 # 17989 # 18693 # -1 # ID=1_24;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.530 1_58 - 190 HTH_17 PF12728.2 51 0.00018 14.3 0.1 1 1 4.8e-06 0.00037 13.3 0.1 2 22 166 186 165 188 0.93 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_25 - 92 Zn_Tnp_IS1595 PF12760.2 46 0.00013 14.3 2.3 1 1 3.4e-06 0.00026 13.4 2.3 21 46 8 38 5 38 0.74 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_58 - 190 HTH_11 PF08279.7 55 1.2e-06 20.7 0.1 1 1 4.7e-08 3.6e-06 19.2 0.0 6 35 157 185 154 187 0.84 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_10 - 1079 PIF1 PF05970.9 364 1.5e-06 19.8 0.1 1 2 1.3e-07 1e-05 17.1 0.0 2 65 478 537 477 588 0.85 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 PIF1 PF05970.9 364 1.5e-06 19.8 0.1 2 2 0.087 6.7 -2.0 0.0 334 363 795 823 782 824 0.84 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_58 - 190 TrmB PF01978.14 68 3.2e-05 16.2 0.0 1 1 8.4e-07 6.4e-05 15.2 0.0 6 42 149 185 146 188 0.92 # 42134 # 42703 # 1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.472 1_10 - 1079 Helicase_RecD PF05127.9 177 1.5e-05 17.2 4.8 1 2 0.00059 0.045 5.9 0.1 122 146 498 522 481 539 0.76 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_10 - 1079 Helicase_RecD PF05127.9 177 1.5e-05 17.2 4.8 2 2 8.1e-06 0.00062 12.0 0.1 75 114 548 585 529 653 0.69 # 5560 # 8796 # 1 # ID=1_10;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.525 1_19 - 397 Pyr_redox_2 PF07992.9 201 2.6e-27 88.5 0.0 1 1 2e-28 7.8e-27 87.0 0.0 62 199 15 242 3 244 0.93 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_16 - 175 Pyr_redox_2 PF07992.9 201 2.2e-14 46.3 0.7 1 1 9.6e-16 3.7e-14 45.6 0.7 1 56 100 157 100 171 0.92 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_16 - 175 DAO PF01266.19 358 1.4e-07 23.2 1.6 1 1 6.6e-09 2.5e-07 22.4 1.6 2 38 101 135 100 161 0.84 # 10942 # 11466 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.651 1_19 - 397 DAO PF01266.19 358 4.2e-07 21.6 1.7 1 1 1.5e-08 5.8e-07 21.2 1.0 151 239 149 235 119 301 0.75 # 15106 # 16296 # 1 # ID=1_19;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.648 1_44 - 867 AAA_10 PF12846.2 304 1.8e-35 115.3 0.1 1 1 2.4e-36 6.1e-35 113.6 0.0 2 292 492 772 491 780 0.84 # 32200 # 34800 # -1 # ID=1_44;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.498 1_9 - 510 AAA_10 PF12846.2 304 4.2e-07 22.2 0.1 1 2 2.1e-05 0.00053 12.0 0.1 3 41 128 166 126 177 0.92 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_9 - 510 AAA_10 PF12846.2 304 4.2e-07 22.2 0.1 2 2 0.00034 0.0087 8.0 0.0 214 286 339 414 307 431 0.75 # 4031 # 5560 # 1 # ID=1_9;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.438 1_37 - 332 AAA_10 PF12846.2 304 0.0002 13.3 0.0 1 1 1.2e-05 0.00032 12.7 0.0 3 29 160 185 158 233 0.81 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 1_25 - 92 DUF2387 PF09526.5 71 0.00014 14.4 0.2 1 1 2.3e-06 0.00017 14.0 0.2 10 47 7 47 5 72 0.76 # 18755 # 19030 # 1 # ID=1_25;partial=00;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.536 1_37 - 332 IstB_IS21 PF01695.12 178 2.1e-05 16.5 0.0 1 1 4.5e-07 3.4e-05 15.8 0.0 44 73 155 184 127 201 0.82 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 2_12 - 422 DNA_pol_lambd_f PF10391.4 52 1.7e-06 20.1 0.1 1 2 3e-07 2.3e-05 16.5 0.0 6 35 182 211 180 216 0.84 # 5232 # 6497 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 2_12 - 422 DNA_pol_lambd_f PF10391.4 52 1.7e-06 20.1 0.1 2 2 0.048 3.7 -0.2 0.0 6 20 265 279 256 283 0.80 # 5232 # 6497 # 1 # ID=2_12;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.535 1_37 - 332 GTP_EFTU PF00009.22 188 0.00017 13.6 0.2 1 1 3.5e-06 0.00027 12.9 0.2 2 32 157 187 156 205 0.83 # 26169 # 27164 # -1 # ID=1_37;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.499 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/8ce78288-0ac3-4241-b261-981d28931331 # Target file: checkm_output/bins/pm1056/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1056/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/8ce78288-0ac3-4241-b261-981d28931331 checkm_output/bins/pm1056/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:33:40 2017 # [ok]