# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_7 - 252 FmrO PF07091.6 251 1.7e-83 268.7 0.0 1 1 2.4e-84 1.9e-83 268.5 0.0 1 251 12 246 12 246 0.98 # 4774 # 5529 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_6 - 235 rve PF00665.21 120 2.6e-14 42.7 0.1 1 2 0.015 0.12 1.9 0.0 78 102 27 49 6 54 0.84 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 rve PF00665.21 120 2.6e-14 42.7 0.1 2 2 6.1e-14 4.9e-13 38.7 0.0 9 119 75 182 70 183 0.89 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 HTH_Tnp_1 PF01527.15 76 2e-05 13.9 0.3 1 1 5.4e-06 4.3e-05 12.9 0.3 4 51 6 58 4 63 0.79 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 DDE_3 PF13358.1 146 5.5e-05 12.3 0.0 1 1 2.1e-05 0.00017 10.7 0.0 32 90 82 141 59 146 0.87 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_2 - 159 Cpn60_TCP1 PF00118.19 485 2.4e-27 84.9 0.0 1 1 3.6e-28 2.9e-27 84.6 0.0 388 483 10 102 4 104 0.95 # 156 # 632 # 1 # ID=1_2;partial=00;start_type=GTG;rbs_motif=None;rbs_spacer=None;gc_cont=0.686 1_6 - 235 HTH_32 PF13565.1 77 1e-07 22.1 0.2 1 1 5.6e-08 4.5e-07 20.0 0.0 26 76 5 50 2 51 0.83 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 HTH_23 PF13384.1 50 4.8e-07 18.8 0.7 1 2 0.016 0.13 1.6 0.0 7 27 11 35 7 36 0.69 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 HTH_23 PF13384.1 50 4.8e-07 18.8 0.7 2 2 1.9e-06 1.5e-05 14.0 0.1 28 42 41 55 40 62 0.87 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 DDE_Tnp_IS66 PF03050.9 271 1.9e-13 39.5 0.3 1 1 3e-14 2.4e-13 39.2 0.3 5 132 10 144 6 174 0.87 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_6 - 235 HTH_28 PF13518.1 52 4.6e-06 16.0 1.2 1 1 2.5e-06 2e-05 14.0 1.2 22 36 40 54 13 55 0.76 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 1_7 - 252 Methyltransf_23 PF13489.1 161 2.9e-05 13.2 0.0 1 1 5.3e-06 4.3e-05 12.6 0.0 7 52 89 132 82 198 0.78 # 4774 # 5529 # 1 # ID=1_7;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.566 1_6 - 235 DDE_Tnp_IS240 PF13610.1 140 6.1e-54 171.2 0.0 1 1 1.1e-54 8.4e-54 170.7 0.0 4 139 75 212 73 213 0.99 # 3848 # 4552 # 1 # ID=1_6;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.532 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/a43a1e4f-e3ca-4a2f-b02e-a1a1cc2bbfea # Target file: checkm_output/bins/pm1047/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1047/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/a43a1e4f-e3ca-4a2f-b02e-a1a1cc2bbfea checkm_output/bins/pm1047/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:33:22 2017 # [ok]