# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_49 - 234 Cons_hypoth95 PF03602.10 183 7.5e-06 19.4 0.0 1 2 0.00015 0.031 7.6 0.0 113 169 19 77 12 86 0.71 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_49 - 234 Cons_hypoth95 PF03602.10 183 7.5e-06 19.4 0.0 2 2 3.1e-05 0.0065 9.8 0.0 20 60 149 188 142 225 0.73 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 2_9 - 388 KaiC PF06745.8 227 0.0017 11.4 0.0 1 1 1.5e-05 0.003 10.6 0.0 14 59 147 191 137 201 0.76 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 6_2 - 304 HTH_IclR PF09339.5 52 3.9e-05 17.2 0.3 1 3 3.4e-06 0.0007 13.1 0.1 17 45 15 43 5 52 0.81 # 451 # 1362 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 6_2 - 304 HTH_IclR PF09339.5 52 3.9e-05 17.2 0.3 2 3 0.047 9.8 -0.1 0.0 10 25 47 62 46 65 0.85 # 451 # 1362 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 6_2 - 304 HTH_IclR PF09339.5 52 3.9e-05 17.2 0.3 3 3 0.051 11 -0.2 0.0 12 30 172 190 170 194 0.80 # 451 # 1362 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_86 - 323 ABC_tran PF00005.22 137 2.7e-05 18.4 0.1 1 1 4.6e-07 4.8e-05 17.6 0.1 2 80 31 110 30 155 0.69 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 ABC_tran PF00005.22 137 0.00029 15.1 0.0 1 1 5.3e-06 0.00055 14.2 0.0 16 33 157 174 149 217 0.83 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_52 - 324 DDR PF08841.5 332 7.1e-05 15.6 1.6 1 2 1.9e-06 0.00039 13.2 0.1 120 161 151 193 121 204 0.78 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_52 - 324 DDR PF08841.5 332 7.1e-05 15.6 1.6 2 2 0.0064 1.3 1.6 0.1 221 287 222 285 204 294 0.63 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_71 - 447 DUF134 PF02001.11 106 0.00032 14.5 0.1 1 1 3.9e-06 0.00081 13.2 0.1 37 83 3 52 1 63 0.81 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_55 - 424 Cdd1 PF11731.3 93 0.00081 13.3 0.0 1 1 1.1e-05 0.0023 11.8 0.0 10 47 177 214 143 227 0.86 # 44440 # 45711 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.545 1_38 - 278 N6_Mtase PF02384.11 311 6.9e-12 38.9 0.0 1 1 5.5e-14 1.1e-11 38.2 0.0 25 117 139 237 130 259 0.85 # 32064 # 32897 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.564 1_70 - 511 rve_3 PF13683.1 67 8.3e-11 35.3 0.0 1 1 6.6e-12 4.6e-10 32.9 0.0 6 67 436 499 431 499 0.93 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_71 - 447 rve_3 PF13683.1 67 1.7e-10 34.3 0.3 1 2 0.016 1.1 2.9 0.1 16 51 17 52 5 53 0.84 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_71 - 447 rve_3 PF13683.1 67 1.7e-10 34.3 0.3 2 2 3.2e-10 2.2e-08 27.5 0.0 5 56 238 292 234 292 0.94 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_87 - 799 rve_3 PF13683.1 67 0.0021 11.5 1.4 1 1 8.4e-05 0.0058 10.1 1.4 12 57 527 575 523 579 0.83 # 72644 # 75040 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 2_9 - 388 FtsK_SpoIIIE PF01580.13 205 0.00021 14.8 0.0 1 1 3.8e-06 0.0004 13.8 0.0 41 59 155 173 129 184 0.85 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_21 - 880 FtsK_SpoIIIE PF01580.13 205 0.00026 14.4 0.0 1 1 5.4e-06 0.00056 13.3 0.0 39 63 480 506 466 508 0.85 # 18804 # 21443 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.562 1_83 - 258 TIGR01830 TIGR01830 239 2.8e-48 158.3 1.2 1 1 1.6e-50 3.3e-48 158.1 1.2 2 239 11 253 10 253 0.91 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 MobB PF03205.9 140 0.001 12.7 0.0 1 1 2.1e-05 0.0022 11.7 0.0 4 25 156 177 154 190 0.85 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_86 - 323 MobB PF03205.9 140 0.0016 12.1 0.2 1 1 4e-05 0.0042 10.7 0.1 2 28 42 68 41 85 0.82 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 3_29 - 83 HTH_8 PF02954.14 42 2.1e-05 18.0 0.1 1 1 3.6e-07 3.7e-05 17.2 0.1 18 36 14 32 13 33 0.92 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 1_101 - 87 HTH_8 PF02954.14 42 0.00024 14.6 0.4 1 1 9.5e-06 0.00099 12.6 0.1 1 16 47 62 47 63 0.92 # 86130 # 86390 # -1 # ID=1_101;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.533 4_3 - 94 HTH_39 PF14090.1 70 0.00054 13.4 0.0 1 1 4.1e-06 0.00086 12.7 0.0 5 36 7 38 5 52 0.89 # 964 # 1245 # -1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.578 1_90 - 207 TetR_N PF00440.18 47 2.9e-12 40.0 0.1 1 1 8.3e-14 5.8e-12 39.1 0.1 3 46 20 63 18 64 0.94 # 76172 # 76792 # 1 # ID=1_90;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.502 1_78 - 194 TetR_N PF00440.18 47 4.4e-12 39.5 0.0 1 1 1.1e-13 7.8e-12 38.7 0.0 1 46 9 54 9 55 0.94 # 66015 # 66596 # 1 # ID=1_78;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_102 - 186 TetR_N PF00440.18 47 5.7e-12 39.1 0.1 1 1 1.4e-13 9.5e-12 38.4 0.1 2 46 8 52 7 53 0.93 # 86603 # 87160 # -1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 5_1 - 1183 AAA_19 PF13245.1 76 5.3e-07 23.3 0.8 1 1 7.6e-09 5.3e-07 23.3 0.8 8 74 413 476 405 479 0.71 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_86 - 323 AAA_19 PF13245.1 76 0.00027 14.7 0.3 1 1 9.7e-06 0.00067 13.4 0.1 6 40 36 69 32 127 0.83 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 1017 AAA_19 PF13245.1 76 0.0011 12.7 0.0 1 1 4.8e-05 0.0034 11.1 0.0 14 31 492 508 481 518 0.90 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_57 - 402 CbiA PF01656.18 195 2.7e-18 60.0 0.0 1 1 2.8e-20 5.9e-18 58.9 0.0 1 142 111 292 111 327 0.76 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_86 - 323 PRK PF00485.13 194 0.00015 15.3 0.0 1 1 1.3e-06 0.00028 14.4 0.0 1 33 42 77 42 121 0.77 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 KTI12 PF08433.5 270 0.0008 12.6 0.0 1 1 6.2e-06 0.0013 11.9 0.0 3 32 42 71 41 131 0.86 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_34 - 240 Sigma70_r4_2 PF08281.7 54 0.0001 15.7 0.0 1 2 3.3e-06 0.00035 14.0 0.0 18 54 165 200 163 200 0.93 # 28666 # 29385 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 1_34 - 240 Sigma70_r4_2 PF08281.7 54 0.0001 15.7 0.0 2 2 0.035 3.7 1.1 0.0 8 29 197 218 195 219 0.90 # 28666 # 29385 # -1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.378 1_56 - 325 Sigma70_r4_2 PF08281.7 54 0.0011 12.4 0.1 1 1 2.7e-05 0.0029 11.1 0.1 23 50 157 184 152 185 0.88 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_58 - 252 Rep_3 PF01051.16 222 5.8e-50 163.8 0.0 1 1 3.1e-52 6.5e-50 163.7 0.0 3 222 16 242 14 242 0.91 # 48676 # 49431 # -1 # ID=1_58;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.474 1_70 - 511 rve PF00665.21 120 3e-21 69.7 0.0 1 2 0.028 1.9 2.6 0.0 55 97 92 139 79 142 0.84 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 rve PF00665.21 120 3e-21 69.7 0.0 2 2 6.4e-21 4.4e-19 62.7 0.0 4 119 346 459 343 460 0.97 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_71 - 447 rve PF00665.21 120 1.8e-13 44.6 0.0 1 1 8.1e-15 5.6e-13 43.0 0.0 4 119 141 262 138 263 0.84 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_87 - 799 rve PF00665.21 120 7.9e-11 36.1 0.0 1 1 3.8e-12 2.6e-10 34.4 0.0 3 118 403 543 401 545 0.82 # 72644 # 75040 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 2_9 - 388 AAA_23 PF13476.1 202 4.1e-06 21.2 0.1 1 1 4.2e-08 8.6e-06 20.1 0.0 19 44 152 177 140 226 0.87 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_49 - 234 Methyltransf_26 PF13659.1 117 5.1e-11 36.6 0.2 1 2 6e-07 6.2e-05 17.0 0.0 63 113 13 70 3 87 0.71 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_49 - 234 Methyltransf_26 PF13659.1 117 5.1e-11 36.6 0.2 2 2 3.9e-07 4.1e-05 17.6 0.1 4 44 174 213 171 228 0.80 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_38 - 278 Methyltransf_26 PF13659.1 117 0.00011 16.2 0.1 1 1 2.6e-06 0.00027 14.9 0.1 3 70 171 243 170 270 0.82 # 32064 # 32897 # -1 # ID=1_38;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.564 5_1 - 1183 AAA_30 PF13604.1 196 1.4e-41 136.2 0.8 1 1 5.6e-43 5.8e-41 134.1 0.8 2 186 400 587 399 591 0.94 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_86 - 323 AAA_30 PF13604.1 196 0.00038 14.0 0.1 1 1 9.4e-06 0.00097 12.7 0.1 13 50 36 72 23 170 0.59 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_56 - 325 CPSase_L_D3 PF02787.14 123 0.00027 14.7 0.5 1 1 1.4e-05 0.0015 12.3 0.2 48 97 133 185 124 190 0.84 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 2_4 - 122 CPSase_L_D3 PF02787.14 123 0.0016 12.2 0.2 1 1 2.2e-05 0.0023 11.6 0.2 50 96 45 91 21 103 0.79 # 1353 # 1718 # -1 # ID=2_4;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.426 2_9 - 388 SMC_N PF02463.14 220 0.0024 11.0 0.0 1 1 2.1e-05 0.0044 10.2 0.0 26 50 154 178 147 195 0.81 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_70 - 511 HTH_Tnp_1 PF01527.15 76 4e-18 59.2 2.7 1 3 1e-06 0.00021 15.2 0.0 9 55 4 50 2 57 0.85 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_Tnp_1 PF01527.15 76 4e-18 59.2 2.7 2 3 1e-06 0.00021 15.2 0.0 3 47 55 100 53 108 0.91 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_Tnp_1 PF01527.15 76 4e-18 59.2 2.7 3 3 1.3e-10 2.7e-08 27.7 0.3 3 72 113 190 111 194 0.77 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_2 - 771 TraG-D_C PF12696.2 128 1.4e-19 64.2 0.0 1 1 3.1e-21 3.2e-19 63.0 0.0 1 127 419 541 419 542 0.88 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 2_30 - 696 TraG-D_C PF12696.2 128 0.00028 14.7 0.1 1 1 4.7e-06 0.00049 13.9 0.1 3 94 437 524 435 556 0.78 # 27560 # 29647 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_57 - 402 MipZ PF09140.6 261 3.9e-06 20.0 0.0 1 2 0.0027 0.56 3.1 0.0 3 50 111 163 109 193 0.73 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_57 - 402 MipZ PF09140.6 261 3.9e-06 20.0 0.0 2 2 8.7e-07 0.00018 14.6 0.0 87 136 233 282 220 296 0.87 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_49 - 234 UPF0020 PF01170.13 180 7.4e-06 19.6 0.0 1 2 5.1e-05 0.011 9.3 0.0 103 120 17 34 5 81 0.84 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_49 - 234 UPF0020 PF01170.13 180 7.4e-06 19.6 0.0 2 2 9.4e-05 0.019 8.4 0.0 28 51 170 193 165 227 0.75 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_83 - 258 Ribosomal_L12 PF00542.14 68 8.8e-05 16.4 0.3 1 1 8.1e-07 0.00017 15.5 0.3 23 62 16 55 6 61 0.90 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 7_1 - 396 DDE_Tnp_1 PF01609.16 213 3.9e-28 92.4 0.0 1 1 2.6e-30 5.4e-28 91.9 0.0 3 212 83 323 81 324 0.93 # 14 # 1201 # -1 # ID=7_1;partial=01;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.485 3_35 - 396 ACT PF01842.20 66 0.00011 15.7 0.4 1 3 0.038 7.9 0.1 0.0 13 27 203 217 203 217 0.90 # 18130 # 19317 # 1 # ID=3_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.601 3_35 - 396 ACT PF01842.20 66 0.00011 15.7 0.4 2 3 1.7e-05 0.0036 10.8 0.1 7 27 290 310 287 310 0.93 # 18130 # 19317 # 1 # ID=3_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.601 3_35 - 396 ACT PF01842.20 66 0.00011 15.7 0.4 3 3 0.076 16 -0.9 0.0 30 59 336 363 334 365 0.74 # 18130 # 19317 # 1 # ID=3_35;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.601 1_29 - 174 DivIC PF04977.10 80 0.0014 12.1 1.3 1 2 3.7e-05 0.0076 9.7 0.4 27 62 72 105 58 114 0.77 # 25744 # 26265 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.605 1_29 - 174 DivIC PF04977.10 80 0.0014 12.1 1.3 2 2 0.0069 1.4 2.4 0.2 32 50 105 123 99 128 0.85 # 25744 # 26265 # -1 # ID=1_29;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.605 1_71 - 447 Trp_repressor PF01371.14 88 0.0018 12.1 0.3 1 1 1.9e-05 0.0039 11.1 0.3 37 69 14 46 6 57 0.90 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_71 - 447 Sigma70_r4 PF04545.11 50 0.0016 11.7 1.3 1 1 2.1e-05 0.0043 10.4 1.3 12 43 18 49 15 52 0.90 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_86 - 323 AAA PF00004.24 132 8.7e-06 19.9 0.0 1 1 9.6e-08 2e-05 18.7 0.0 3 74 45 140 43 178 0.76 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_56 - 325 HTH_37 PF13744.1 80 7.6e-05 16.5 2.7 1 2 0.016 1.1 3.1 0.0 27 56 9 38 6 44 0.83 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_56 - 325 HTH_37 PF13744.1 80 7.6e-05 16.5 2.7 2 2 9.1e-05 0.0063 10.3 0.2 27 53 156 182 134 185 0.87 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 3_29 - 83 HTH_37 PF13744.1 80 8.9e-05 16.2 0.0 1 1 2.6e-06 0.00018 15.2 0.0 24 54 7 37 4 46 0.89 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 3_36 - 91 HTH_37 PF13744.1 80 0.0018 12.1 0.0 1 1 3.5e-05 0.0025 11.6 0.0 25 53 22 50 19 54 0.92 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_86 - 323 TIGR00064 TIGR00064 279 0.00045 13.1 0.0 1 1 4.3e-06 0.00089 12.2 0.0 76 110 37 71 12 75 0.78 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_49 - 234 N6_N4_Mtase PF01555.13 231 2e-32 106.4 0.0 1 2 5.8e-13 1.2e-10 35.2 0.0 1 113 21 130 21 137 0.85 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_49 - 234 N6_N4_Mtase PF01555.13 231 2e-32 106.4 0.0 2 2 2e-23 4.2e-21 69.4 0.0 170 227 149 206 135 210 0.92 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_70 - 511 rve_2 PF13333.1 52 1.1e-15 51.5 1.1 1 1 1.3e-17 2.7e-15 50.2 0.2 1 50 450 505 450 506 0.91 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 P22_Cro PF14549.1 60 0.0019 11.9 0.0 1 1 2.1e-05 0.0044 10.7 0.0 10 40 134 164 129 167 0.88 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 3_24 - 325 Hydantoinase_A PF01968.13 290 8.2e-08 25.5 2.0 1 2 9.9e-07 0.0001 15.4 0.1 67 96 158 186 144 195 0.82 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_24 - 325 Hydantoinase_A PF01968.13 290 8.2e-08 25.5 2.0 2 2 6.3e-05 0.0066 9.5 0.2 212 265 248 301 191 322 0.76 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_52 - 324 Hydantoinase_A PF01968.13 290 0.0004 13.5 2.5 1 3 0.022 2.3 1.1 0.0 152 177 104 152 50 164 0.72 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_52 - 324 Hydantoinase_A PF01968.13 290 0.0004 13.5 2.5 2 3 0.00014 0.014 8.3 1.2 76 100 164 187 148 237 0.64 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_52 - 324 Hydantoinase_A PF01968.13 290 0.0004 13.5 2.5 3 3 0.011 1.1 2.1 0.1 209 260 246 293 202 314 0.68 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_86 - 323 cobW PF02492.14 178 0.0012 12.2 0.0 1 1 1e-05 0.0022 11.4 0.0 3 32 43 72 41 84 0.89 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 AAA_16 PF13191.1 185 3.8e-10 34.0 1.0 1 1 2.4e-10 1.2e-08 29.0 0.2 18 179 34 153 22 162 0.74 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_2 - 771 AAA_16 PF13191.1 185 5.9e-06 20.3 0.0 1 1 5.6e-07 2.9e-05 18.0 0.0 20 56 181 218 179 254 0.78 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 2_9 - 388 AAA_16 PF13191.1 185 0.0018 12.2 0.0 1 1 7.1e-05 0.0037 11.2 0.0 26 50 154 178 140 211 0.85 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 5_1 - 1183 AAA_16 PF13191.1 185 0.012 9.5 0.0 1 1 0.00023 0.012 9.5 0.0 24 48 416 440 402 459 0.86 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_86 - 323 AAA_22 PF13401.1 131 2e-14 47.8 0.2 1 1 7.3e-16 5e-14 46.5 0.2 3 129 39 170 35 172 0.81 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 AAA_22 PF13401.1 131 6e-06 20.4 0.0 1 1 2.1e-07 1.5e-05 19.1 0.0 4 30 152 178 149 243 0.84 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_23 - 1017 AAA_22 PF13401.1 131 0.00043 14.4 0.0 1 1 2e-05 0.0014 12.7 0.0 8 73 492 561 486 594 0.70 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 3_12 - 287 Methyltransf_27 PF13708.1 194 2.8e-68 223.2 0.0 1 1 2.3e-70 4.7e-68 222.5 0.0 2 194 89 282 88 282 0.97 # 4245 # 5105 # -1 # ID=3_12;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.525 2_9 - 388 AAA_29 PF13555.1 62 1.8e-05 18.1 0.1 1 1 2.2e-07 4.6e-05 16.9 0.1 26 43 155 172 147 175 0.84 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 6_2 - 304 HTH_1 PF00126.22 60 4.5e-19 62.0 0.7 1 1 3.7e-21 7.7e-19 61.2 0.7 2 59 5 62 4 63 0.96 # 451 # 1362 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_71 - 447 LZ_Tnp_IS481 PF13011.1 85 1.9e-06 22.1 0.5 1 1 8.6e-08 8.9e-06 20.0 0.2 15 66 16 69 9 80 0.82 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_70 - 511 LZ_Tnp_IS481 PF13011.1 85 0.0029 11.9 2.6 1 1 3.1e-05 0.0032 11.8 0.1 15 65 123 174 115 194 0.79 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_83 - 258 adh_short_C2 PF13561.1 241 4.3e-36 118.8 1.0 1 1 2.3e-38 4.8e-36 118.6 1.0 5 240 16 252 13 253 0.91 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 SRP54 PF00448.17 196 0.00083 12.8 0.0 1 1 7.4e-06 0.0015 11.9 0.0 3 31 42 70 40 77 0.88 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_83 - 258 adh_short PF00106.20 167 2.8e-24 79.8 2.1 1 1 2e-26 4.1e-24 79.3 2.1 3 166 10 175 8 176 0.89 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 447 HTH_32 PF13565.1 77 3.3e-11 37.8 0.1 1 1 1.4e-12 1.4e-10 35.8 0.1 2 77 43 116 42 116 0.85 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_87 - 799 HTH_32 PF13565.1 77 0.00023 15.9 0.7 1 2 0.0055 0.57 5.0 0.2 28 77 250 297 221 297 0.74 # 72644 # 75040 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_87 - 799 HTH_32 PF13565.1 77 0.00023 15.9 0.7 2 2 2.2e-06 0.00023 15.9 0.7 1 65 292 359 292 381 0.74 # 72644 # 75040 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 3_29 - 83 HTH_3 PF01381.17 55 3.9e-09 30.2 0.1 1 1 1.6e-10 6.5e-09 29.5 0.1 4 45 9 50 6 56 0.86 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 3_15 - 89 HTH_3 PF01381.17 55 2.3e-06 21.4 0.0 1 1 7e-08 2.9e-06 21.0 0.0 8 36 41 69 33 78 0.88 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 3_36 - 91 HTH_3 PF01381.17 55 0.00013 15.7 0.0 1 1 4.5e-06 0.00019 15.2 0.0 2 32 21 51 21 55 0.90 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 1_71 - 447 HTH_3 PF01381.17 55 0.00031 14.6 0.1 1 1 2.3e-05 0.00097 13.0 0.1 8 30 25 47 21 52 0.87 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 3_20 - 160 HTH_3 PF01381.17 55 0.00031 14.6 0.1 1 2 0.0036 0.15 5.9 0.0 2 20 15 33 14 37 0.91 # 9398 # 9877 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_20 - 160 HTH_3 PF01381.17 55 0.00031 14.6 0.1 2 2 0.0027 0.11 6.3 0.0 1 23 96 118 96 120 0.89 # 9398 # 9877 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_83 - 258 Epimerase PF01370.16 236 0.00015 15.2 0.2 1 1 2.5e-06 0.00052 13.4 0.2 2 227 11 238 10 248 0.69 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 447 HTH_23 PF13384.1 50 3.2e-12 39.7 0.4 1 1 5.3e-13 1.4e-11 37.7 0.3 2 49 10 58 9 59 0.95 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_70 - 511 HTH_23 PF13384.1 50 8.9e-06 19.2 8.3 1 2 0.0028 0.072 6.8 0.1 2 45 2 47 1 51 0.88 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_23 PF13384.1 50 8.9e-06 19.2 8.3 2 2 7.8e-06 0.0002 14.9 0.0 5 40 120 156 118 164 0.91 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 3_15 - 89 HTH_23 PF13384.1 50 1.5e-05 18.6 0.0 1 1 8.5e-07 2.2e-05 18.0 0.0 16 39 38 64 33 68 0.83 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 3_36 - 91 HTH_23 PF13384.1 50 1.7e-05 18.4 0.1 1 1 1.1e-06 2.8e-05 17.7 0.1 12 38 23 49 19 54 0.85 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 3_29 - 83 HTH_23 PF13384.1 50 9.3e-05 16.0 0.0 1 1 7e-06 0.00018 15.1 0.0 15 34 10 31 6 40 0.81 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 1_67 - 686 HTH_23 PF13384.1 50 0.00045 13.8 0.2 1 1 0.00014 0.0038 10.9 0.0 13 40 150 177 147 186 0.86 # 54898 # 56955 # -1 # ID=1_67;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_56 - 325 HTH_23 PF13384.1 50 0.0008 13.0 0.1 1 1 0.0002 0.0052 10.5 0.0 9 40 152 183 151 188 0.88 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_79 - 113 HTH_23 PF13384.1 50 0.0017 12.0 0.0 1 1 0.00012 0.0031 11.2 0.0 13 30 71 88 63 90 0.80 # 66601 # 66939 # 1 # ID=1_79;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.578 1_2 - 771 zf-DHHC PF01529.15 174 0.018 8.3 3.8 1 1 0.00018 0.038 7.3 3.8 90 157 27 129 25 147 0.76 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 3_29 - 83 HTH_19 PF12844.2 64 8.3e-08 26.2 0.0 1 1 1.7e-09 1.2e-07 25.7 0.0 8 45 10 47 8 56 0.86 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 3_36 - 91 HTH_19 PF12844.2 64 1.8e-05 18.7 0.0 1 1 3.4e-07 2.4e-05 18.3 0.0 5 35 21 51 21 66 0.92 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 3_15 - 89 HTH_19 PF12844.2 64 0.00018 15.5 0.0 1 1 3.4e-06 0.00024 15.1 0.0 4 39 33 69 30 73 0.85 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_83 - 258 NAD_binding_10 PF13460.1 183 7.7e-05 16.7 1.6 1 1 3.9e-06 0.00082 13.3 1.6 2 178 11 231 10 236 0.51 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_71 - 447 HTH_29 PF13551.1 112 2e-18 60.6 0.4 1 1 6.3e-20 4.4e-18 59.5 0.4 1 111 15 119 15 120 0.93 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_70 - 511 HTH_29 PF13551.1 112 1.6e-05 19.0 2.2 1 2 0.0043 0.3 5.2 0.0 2 67 8 68 7 103 0.63 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_29 PF13551.1 112 1.6e-05 19.0 2.2 2 2 3.5e-05 0.0024 12.0 0.6 1 97 122 215 122 217 0.65 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_87 - 799 HTH_29 PF13551.1 112 4.2e-05 17.6 0.4 1 1 3.8e-06 0.00026 15.1 0.1 14 96 278 357 270 366 0.70 # 72644 # 75040 # -1 # ID=1_87;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.536 1_84 - 359 TIGR00508 TIGR00508 419 0.0014 10.9 0.0 1 1 1.2e-05 0.0025 10.0 0.0 213 246 143 176 140 199 0.88 # 70410 # 71486 # -1 # ID=1_84;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.502 1_86 - 323 Arch_ATPase PF01637.13 234 2.7e-05 17.9 0.3 1 1 3e-07 6.3e-05 16.7 0.3 8 131 30 137 27 164 0.64 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 AAA_5 PF07728.9 139 3.3e-05 17.6 0.2 1 1 6.6e-07 0.00014 15.6 0.2 5 90 46 149 43 154 0.94 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 ResIII PF04851.10 184 0.00066 13.5 0.5 1 2 0.00043 0.09 6.5 0.3 10 64 28 80 21 114 0.74 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 ResIII PF04851.10 184 0.00066 13.5 0.5 2 2 0.00093 0.19 5.4 0.1 131 162 101 140 74 153 0.60 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_2 - 771 TrwB_AAD_bind PF10412.4 386 1.4e-148 488.5 0.0 1 1 3.4e-150 1.7e-148 488.2 0.0 2 386 172 561 171 561 0.99 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 2_30 - 696 TrwB_AAD_bind PF10412.4 386 3.9e-06 19.6 0.9 1 2 6.9e-05 0.0036 9.8 0.0 16 36 134 154 125 158 0.88 # 27560 # 29647 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 2_30 - 696 TrwB_AAD_bind PF10412.4 386 3.9e-06 19.6 0.9 2 2 0.00037 0.019 7.4 0.1 93 140 235 281 229 303 0.80 # 27560 # 29647 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_21 - 880 TrwB_AAD_bind PF10412.4 386 2.9e-05 16.7 0.1 1 1 1.5e-06 7.8e-05 15.3 0.0 16 94 482 556 474 569 0.72 # 18804 # 21443 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.562 1_86 - 323 TrwB_AAD_bind PF10412.4 386 0.00026 13.6 0.4 1 1 4.5e-05 0.0023 10.5 0.1 15 44 40 69 36 74 0.86 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_57 - 402 TIGR01968 TIGR01968 261 0.0018 11.3 0.0 1 2 0.0091 1.9 1.3 0.0 4 28 111 135 108 169 0.76 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_57 - 402 TIGR01968 TIGR01968 261 0.0018 11.3 0.0 2 2 0.00016 0.032 7.1 0.0 102 138 235 271 226 288 0.87 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_86 - 323 AAA_18 PF13238.1 129 4.7e-05 17.7 0.0 1 1 8.2e-07 8.5e-05 16.8 0.0 1 40 43 83 43 137 0.67 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 1017 AAA_18 PF13238.1 129 0.00018 15.8 1.3 1 1 7.1e-06 0.00074 13.8 0.0 2 19 492 509 492 571 0.76 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_55 - 424 IMS_HHH PF11798.3 32 5.3e-08 26.6 0.1 1 1 1.3e-09 1.3e-07 25.3 0.1 2 32 170 200 169 200 0.91 # 44440 # 45711 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.545 1_107 - 435 IMS_HHH PF11798.3 32 0.001 13.1 0.0 1 1 2.9e-05 0.003 11.6 0.0 12 32 192 212 182 212 0.83 # 88550 # 89854 # -1 # ID=1_107;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.590 1_49 - 234 Methyltransf_15 PF09445.5 164 0.0016 12.0 0.0 1 2 0.023 4.8 0.6 0.0 53 80 4 30 2 38 0.91 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_49 - 234 Methyltransf_15 PF09445.5 164 0.0016 12.0 0.0 2 2 7e-05 0.015 8.8 0.0 3 30 173 200 171 213 0.90 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_21 - 880 DUF87 PF01935.12 229 4e-06 20.7 0.0 1 1 2.6e-07 2.7e-05 18.0 0.0 26 223 484 675 479 681 0.77 # 18804 # 21443 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.562 2_9 - 388 DUF87 PF01935.12 229 0.00019 15.2 0.0 1 1 3.6e-06 0.00038 14.2 0.0 28 45 157 174 155 188 0.89 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_71 - 447 HTH_28 PF13518.1 52 4.7e-14 46.1 2.0 1 1 9e-16 4.7e-14 46.1 2.0 1 52 14 66 14 67 0.96 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_70 - 511 HTH_28 PF13518.1 52 1.9e-08 28.1 7.9 1 3 2.3e-05 0.0012 12.8 0.5 2 47 7 56 6 61 0.80 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_28 PF13518.1 52 1.9e-08 28.1 7.9 2 3 0.072 3.8 1.6 0.0 1 21 63 84 63 100 0.68 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_28 PF13518.1 52 1.9e-08 28.1 7.9 3 3 2.6e-06 0.00014 15.8 0.2 4 47 124 169 121 174 0.75 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 3_15 - 89 HTH_28 PF13518.1 52 0.00013 15.9 0.0 1 1 3.5e-06 0.00018 15.4 0.0 7 34 34 64 33 68 0.82 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 3_29 - 83 HTH_28 PF13518.1 52 0.00087 13.3 0.1 1 1 3.6e-05 0.0019 12.2 0.1 8 29 8 31 6 35 0.78 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 1_86 - 323 TIGR00041 TIGR00041 196 1.6e-05 18.3 0.0 1 1 1.3e-07 2.7e-05 17.6 0.0 2 54 38 95 37 119 0.78 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_70 - 511 HTH_Tnp_1_2 PF13022.1 142 3.8e-05 17.5 0.2 1 2 6.6e-05 0.014 9.2 0.0 32 64 131 163 123 197 0.83 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_70 - 511 HTH_Tnp_1_2 PF13022.1 142 3.8e-05 17.5 0.2 2 2 0.00075 0.16 5.7 0.1 33 93 234 297 182 318 0.79 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 1_71 - 447 HTH_24 PF13412.1 48 5.8e-05 16.4 0.2 1 1 1.1e-06 0.00012 15.5 0.2 9 45 16 54 16 54 0.93 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_56 - 325 HTH_24 PF13412.1 48 0.00014 15.2 1.5 1 1 2.3e-06 0.00024 14.5 0.1 15 39 158 182 151 184 0.84 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_71 - 447 HTH_18 PF12833.2 81 0.00045 14.3 0.1 1 2 2.1e-05 0.0044 11.1 0.1 2 33 33 64 32 82 0.91 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_71 - 447 HTH_18 PF12833.2 81 0.00045 14.3 0.1 2 2 0.091 19 -0.5 0.0 61 76 283 298 251 299 0.79 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_49 - 234 TIGR03534 TIGR03534 253 0.0021 11.1 0.0 1 1 3.7e-05 0.0077 9.3 0.0 146 168 11 32 2 108 0.81 # 38791 # 39492 # -1 # ID=1_49;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.603 1_102 - 186 HTH_10 PF04967.7 53 0.0014 12.1 0.0 1 1 3.1e-05 0.0064 10.1 0.0 25 44 24 43 21 46 0.89 # 86603 # 87160 # -1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 2_9 - 388 Miro PF08477.8 119 0.002 12.6 0.0 1 1 2.1e-05 0.0044 11.5 0.0 4 28 157 186 156 220 0.72 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_29 - 83 HTH_31 PF13560.1 64 4e-09 30.6 0.9 1 1 9.9e-11 5.1e-09 30.2 0.9 9 56 9 55 6 72 0.90 # 14794 # 15042 # -1 # ID=3_29;partial=00;start_type=TTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.574 3_36 - 91 HTH_31 PF13560.1 64 5.9e-07 23.6 0.4 1 1 1.8e-08 9.5e-07 22.9 0.3 7 36 21 50 17 65 0.89 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 3_20 - 160 HTH_31 PF13560.1 64 1.4e-06 22.4 1.2 1 2 0.0047 0.24 5.6 0.0 6 33 14 41 12 48 0.88 # 9398 # 9877 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_20 - 160 HTH_31 PF13560.1 64 1.4e-06 22.4 1.2 2 2 3.7e-06 0.00019 15.6 0.3 4 39 94 129 91 135 0.88 # 9398 # 9877 # -1 # ID=3_20;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_15 - 89 HTH_31 PF13560.1 64 4.3e-06 20.9 0.0 1 1 1.1e-07 5.8e-06 20.4 0.0 2 42 29 69 28 80 0.84 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_86 - 323 DUF2075 PF09848.4 352 1e-05 18.6 0.0 1 1 1.4e-07 1.5e-05 18.0 0.0 2 96 41 137 40 175 0.71 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 1017 DUF2075 PF09848.4 352 0.00074 12.5 0.0 1 1 2.2e-05 0.0023 10.8 0.0 5 22 492 509 489 537 0.87 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 5_1 - 1183 UvrD_C_2 PF13538.1 104 1.8e-07 25.3 0.3 1 1 5.6e-09 1.2e-06 22.6 0.1 3 102 769 872 762 874 0.75 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 2_9 - 388 T2SE PF00437.15 272 5.9e-23 75.0 0.0 1 1 9.3e-25 9.6e-23 74.3 0.0 11 269 24 303 15 306 0.78 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_86 - 323 T2SE PF00437.15 272 3.3e-05 16.8 0.2 1 1 6.5e-07 6.7e-05 15.8 0.2 111 160 23 71 7 132 0.87 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 3_24 - 325 StbA PF06406.6 318 1.5e-156 514.1 0.2 1 1 1.6e-158 1.7e-156 513.9 0.2 1 318 1 322 1 322 0.99 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_52 - 324 StbA PF06406.6 318 1.8e-125 411.9 0.0 1 1 2e-127 2.1e-125 411.7 0.0 1 316 1 317 1 319 0.98 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_86 - 323 NACHT PF05729.7 166 0.00046 13.8 0.0 1 1 9.3e-06 0.00097 12.7 0.0 1 32 41 72 41 143 0.73 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 NACHT PF05729.7 166 0.0007 13.2 0.0 1 1 1.3e-05 0.0014 12.3 0.0 4 29 156 181 154 188 0.83 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_86 - 323 UPF0079 PF02367.12 123 6.1e-05 16.6 0.0 1 1 5.4e-07 0.00011 15.7 0.0 5 78 30 103 26 119 0.80 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_23 - 1017 AAA_17 PF13207.1 121 0.00013 16.8 0.0 1 1 8.5e-06 0.00089 14.0 0.0 3 27 492 522 492 581 0.72 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 1_86 - 323 AAA_17 PF13207.1 121 0.00032 15.5 0.0 1 1 8e-06 0.00083 14.1 0.0 1 24 42 69 42 154 0.68 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 AAA_25 PF13481.1 194 1.2e-05 18.7 0.0 1 1 1.3e-07 2.7e-05 17.6 0.0 24 53 143 172 120 178 0.86 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 3_5 - 147 RepA_N PF06970.6 76 0.0017 12.1 0.0 1 1 1.6e-05 0.0033 11.2 0.0 15 44 56 85 53 90 0.92 # 1352 # 1792 # -1 # ID=3_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.549 5_1 - 1183 Viral_helicase1 PF01443.13 234 0.00087 12.8 0.0 1 2 5.8e-05 0.012 9.0 0.0 1 22 419 440 419 516 0.79 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 5_1 - 1183 Viral_helicase1 PF01443.13 234 0.00087 12.8 0.0 2 2 0.015 3.1 1.1 0.0 184 234 826 875 754 875 0.61 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 1_81 - 369 Oxidored_FMN PF00724.15 341 7.8e-84 275.4 0.0 1 1 4.4e-86 9.1e-84 275.2 0.0 1 339 3 339 3 341 0.87 # 67512 # 68618 # 1 # ID=1_81;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.575 1_21 - 880 Pox_A32 PF04665.7 241 0.00015 15.0 0.0 1 1 1.5e-06 0.00032 14.0 0.0 6 40 474 508 470 523 0.82 # 18804 # 21443 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.562 1_86 - 323 AAA_14 PF13173.1 128 0.00026 14.9 0.1 1 1 5.8e-06 0.0012 12.7 0.1 2 75 40 138 39 172 0.53 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 3_24 - 325 Hydant_A_N PF05378.8 176 0.0014 12.1 3.4 1 4 0.069 14 -1.0 0.0 1 19 2 20 2 52 0.83 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_24 - 325 Hydant_A_N PF05378.8 176 0.0014 12.1 3.4 2 4 0.057 12 -0.7 0.0 108 154 38 86 17 98 0.66 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_24 - 325 Hydant_A_N PF05378.8 176 0.0014 12.1 3.4 3 4 0.057 12 -0.7 0.0 95 129 113 147 89 153 0.76 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 3_24 - 325 Hydant_A_N PF05378.8 176 0.0014 12.1 3.4 4 4 3.6e-05 0.0075 9.7 0.2 2 51 170 217 169 226 0.82 # 11513 # 12487 # -1 # ID=3_24;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.550 1_96 - 335 Transposase_20 PF02371.11 87 2.1e-24 79.4 0.2 1 1 7e-26 4.8e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 82687 # 83691 # 1 # ID=1_96;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.491 1_94 - 335 Transposase_20 PF02371.11 87 2.3e-24 79.3 0.2 1 1 7e-26 4.8e-24 78.3 0.2 2 78 210 286 209 296 0.94 # 79555 # 80559 # 1 # ID=1_94;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.483 1_72 - 413 Transposase_20 PF02371.11 87 6.5e-18 58.6 0.0 1 1 3.4e-19 2.4e-17 56.8 0.0 1 87 273 359 273 359 0.94 # 61243 # 62481 # 1 # ID=1_72;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.504 1_71 - 447 HTH_Tnp_ISL3 PF13542.1 52 0.00033 13.8 0.1 1 2 7.8e-05 0.0081 9.3 0.1 19 51 17 50 12 51 0.93 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 1_71 - 447 HTH_Tnp_ISL3 PF13542.1 52 0.00033 13.8 0.1 2 2 0.019 2 1.7 0.0 7 27 66 86 65 90 0.89 # 59482 # 60822 # 1 # ID=1_71;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.490 3_15 - 89 HTH_Tnp_ISL3 PF13542.1 52 0.00076 12.6 0.0 1 1 1e-05 0.001 12.2 0.0 19 49 35 64 33 65 0.91 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_86 - 323 AAA_33 PF13671.1 143 0.00049 13.9 0.0 1 1 4.8e-06 0.00099 12.9 0.0 1 39 42 94 42 128 0.63 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 3_15 - 89 CENP-B_N PF04218.8 53 0.0029 11.0 0.0 1 1 1.9e-05 0.0039 10.6 0.0 24 49 44 69 34 72 0.88 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_86 - 323 ArgK PF03308.11 267 0.00073 12.3 0.2 1 2 2.4e-05 0.0051 9.5 0.0 13 58 24 69 16 74 0.89 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 ArgK PF03308.11 267 0.00073 12.3 0.2 2 2 0.018 3.8 0.1 0.0 51 84 116 149 110 156 0.85 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 2_9 - 388 Ribosomal_S5 PF00333.15 67 6.3e-05 16.7 0.1 1 2 0.00091 0.19 5.5 0.0 26 45 84 103 76 114 0.83 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_9 - 388 Ribosomal_S5 PF00333.15 67 6.3e-05 16.7 0.1 2 2 0.00012 0.024 8.4 0.0 21 54 242 274 230 278 0.91 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_2 - 771 T4SS-DNA_transf PF02534.9 469 2e-08 27.1 0.0 1 2 0.035 7.2 -1.1 0.0 128 199 260 330 249 359 0.73 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 1_2 - 771 T4SS-DNA_transf PF02534.9 469 2e-08 27.1 0.0 2 2 3.4e-10 7e-08 25.3 0.0 275 393 393 507 363 559 0.74 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 2_9 - 388 RNA_helicase PF00910.17 107 0.0023 12.1 0.0 1 1 2.5e-05 0.0051 10.9 0.0 3 26 157 180 156 197 0.81 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_83 - 258 Eno-Rase_NADH_b PF12242.3 78 0.00015 15.5 0.1 1 1 3e-06 0.00062 13.5 0.2 37 65 6 32 1 44 0.77 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 6_5 - 126 DDE_Tnp_IS1 PF03400.8 131 7e-76 246.5 1.5 1 1 3.7e-78 7.7e-76 246.4 1.5 7 131 1 125 1 125 1.00 # 3000 # 3377 # 1 # ID=6_5;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.540 1_83 - 258 3HCDH_N PF02737.13 180 0.0007 13.2 1.1 1 2 9.2e-06 0.0019 11.8 0.5 6 70 15 80 9 94 0.78 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_83 - 258 3HCDH_N PF02737.13 180 0.0007 13.2 1.1 2 2 0.055 12 -0.5 0.0 12 30 169 187 162 231 0.71 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 3_36 - 91 Mor PF08765.6 108 0.0015 12.2 0.0 1 1 9.2e-06 0.0019 11.9 0.0 71 93 27 49 18 57 0.85 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 3_15 - 89 Phage_CII PF05269.6 91 0.0015 12.5 0.0 1 1 9.2e-06 0.0019 12.2 0.0 17 45 36 64 32 81 0.83 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 2_9 - 388 ATP_bind_1 PF03029.12 238 0.0017 11.8 0.0 1 1 1.3e-05 0.0027 11.2 0.0 1 25 157 181 157 191 0.84 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 2_14 - 71 DDE_Tnp_IS240 PF13610.1 140 0.00048 14.1 0.0 1 1 3.2e-06 0.00067 13.6 0.0 29 64 23 57 5 62 0.83 # 10729 # 10941 # -1 # ID=2_14;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.446 3_36 - 91 HTH_26 PF13443.1 63 0.00023 15.3 0.0 1 1 4.9e-06 0.00034 14.8 0.0 4 34 22 52 21 56 0.91 # 19336 # 19608 # 1 # ID=3_36;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.656 3_15 - 89 HTH_26 PF13443.1 63 0.00056 14.1 0.0 1 1 1.1e-05 0.00075 13.7 0.0 11 47 43 78 33 82 0.90 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_56 - 325 HTH_26 PF13443.1 63 0.0015 12.7 0.2 1 2 0.024 1.7 2.9 0.1 9 36 11 39 7 44 0.85 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_56 - 325 HTH_26 PF13443.1 63 0.0015 12.7 0.2 2 2 0.0021 0.14 6.3 0.0 5 31 155 181 151 187 0.90 # 45793 # 46767 # -1 # ID=1_56;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.451 1_52 - 324 MreB_Mbl PF06723.8 327 0.00016 14.2 0.0 1 2 0.00011 0.023 7.2 0.0 109 162 127 182 120 193 0.82 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 1_52 - 324 MreB_Mbl PF06723.8 327 0.00016 14.2 0.0 2 2 0.00052 0.11 4.9 0.0 246 290 246 288 233 319 0.81 # 40896 # 41867 # -1 # ID=1_52;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.568 6_2 - 304 MarR_2 PF12802.2 62 0.00026 14.6 0.1 1 1 8e-06 0.0017 12.0 0.1 25 48 20 43 8 52 0.89 # 451 # 1362 # 1 # ID=6_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.480 1_86 - 323 PIF1 PF05970.9 364 3.5e-06 20.1 0.0 1 1 3.4e-08 7e-06 19.1 0.0 7 126 27 148 23 166 0.73 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 3_15 - 89 HTH_Crp_2 PF13545.1 76 0.00094 12.9 0.0 1 1 6.6e-06 0.0014 12.4 0.0 26 50 40 64 32 65 0.88 # 7312 # 7578 # -1 # ID=3_15;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.584 1_21 - 880 AAA_10 PF12846.2 304 3e-46 152.1 0.0 1 1 1.4e-47 4.8e-46 151.4 0.0 1 294 481 773 481 779 0.87 # 18804 # 21443 # -1 # ID=1_21;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.562 2_23 - 1017 AAA_10 PF12846.2 304 1.7e-40 133.2 0.1 1 1 1.1e-41 3.8e-40 132.1 0.0 5 297 492 884 489 889 0.91 # 16838 # 19888 # 1 # ID=2_23;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.473 2_30 - 696 AAA_10 PF12846.2 304 1.3e-09 31.8 0.0 1 1 5.6e-11 1.9e-09 31.2 0.0 2 292 134 503 133 514 0.76 # 27560 # 29647 # -1 # ID=2_30;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.548 1_2 - 771 AAA_10 PF12846.2 304 4.5e-09 30.0 0.0 1 2 3.1e-05 0.0011 12.4 0.0 3 43 187 227 186 260 0.92 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 1_2 - 771 AAA_10 PF12846.2 304 4.5e-09 30.0 0.0 2 2 3.4e-06 0.00012 15.5 0.0 201 296 398 494 282 499 0.85 # 1835 # 4147 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.559 2_9 - 388 AAA_10 PF12846.2 304 3e-06 20.8 0.0 1 1 5e-07 1.7e-05 18.3 0.0 3 27 154 178 152 196 0.74 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 1_86 - 323 AAA_10 PF12846.2 304 3.4e-05 17.3 0.2 1 3 0.00058 0.02 8.2 0.0 3 29 42 68 40 101 0.84 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 AAA_10 PF12846.2 304 3.4e-05 17.3 0.2 2 3 0.0077 0.27 4.5 0.0 217 236 121 140 84 156 0.80 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_86 - 323 AAA_10 PF12846.2 304 3.4e-05 17.3 0.2 3 3 0.088 3.1 1.0 0.1 106 171 239 302 177 316 0.59 # 71686 # 72654 # -1 # ID=1_86;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.541 1_102 - 186 HTH_20 PF12840.2 61 0.00038 14.2 0.0 1 1 6.9e-06 0.0014 12.4 0.0 21 46 19 44 6 45 0.85 # 86603 # 87160 # -1 # ID=1_102;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.548 1_57 - 402 AAA_31 PF13614.1 157 0.0002 15.3 0.0 1 1 5.5e-06 0.0011 12.8 0.0 108 147 235 273 230 279 0.86 # 46767 # 47972 # -1 # ID=1_57;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.459 1_83 - 258 KR PF08659.5 181 1.8e-11 37.9 2.5 1 1 1.8e-13 3.8e-11 36.9 2.5 4 162 11 170 9 190 0.79 # 69451 # 70224 # 1 # ID=1_83;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.541 1_55 - 424 DNA_pol_lambd_f PF10391.4 52 0.00011 15.6 0.2 1 1 4.5e-06 0.00093 12.7 0.0 5 29 182 206 178 217 0.87 # 44440 # 45711 # 1 # ID=1_55;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.545 5_1 - 1183 AAA_11 PF13086.1 236 1.1e-05 19.1 2.6 1 2 2.3e-07 4.8e-05 16.9 0.0 2 72 400 467 399 497 0.83 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 5_1 - 1183 AAA_11 PF13086.1 236 1.1e-05 19.1 2.6 2 2 0.02 4.1 0.8 0.0 3 37 611 644 609 778 0.70 # 3 # 3551 # 1 # ID=5_1;partial=10;start_type=Edge;rbs_motif=None;rbs_spacer=None;gc_cont=0.627 3_2 - 145 SSB PF00436.20 104 1.5e-30 99.1 0.3 1 1 1.7e-32 1.8e-30 98.9 0.3 2 103 7 111 6 112 0.96 # 142 # 576 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.485 1_69 - 152 SSB PF00436.20 104 1.6e-28 92.6 0.4 1 1 2e-30 2e-28 92.3 0.4 26 99 2 76 1 84 0.95 # 57322 # 57777 # -1 # ID=1_69;partial=00;start_type=GTG;rbs_motif=GGxGG;rbs_spacer=3-4bp;gc_cont=0.627 1_70 - 511 HTH_21 PF13276.1 60 4.5e-14 46.2 8.6 1 1 3.2e-16 6.6e-14 45.7 6.9 9 60 271 321 263 323 0.85 # 57861 # 59393 # -1 # ID=1_70;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.504 2_9 - 388 GTP_EFTU PF00009.22 188 0.0022 11.4 0.0 1 1 2e-05 0.0041 10.5 0.0 8 34 157 183 155 195 0.87 # 5577 # 6740 # 1 # ID=2_9;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.522 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/9e015253-bf62-4eec-843d-b104e8613d5e # Target file: checkm_output/bins/pm1040/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1040/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/9e015253-bf62-4eec-843d-b104e8613d5e checkm_output/bins/pm1040/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:33:18 2017 # [ok]