# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_5 - 228 Cons_hypoth95 PF03602.10 183 9.3e-06 17.9 0.0 1 2 0.00032 0.028 6.5 0.0 113 146 19 54 5 81 0.66 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 Cons_hypoth95 PF03602.10 183 9.3e-06 17.9 0.0 2 2 4e-05 0.0036 9.4 0.0 41 62 162 183 145 218 0.78 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 4_5 - 63 Zn_Tnp_IS1 PF03811.8 36 4.2e-24 76.6 4.5 1 1 6.2e-26 5.5e-24 76.2 4.5 1 36 1 36 1 36 0.99 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_1 - 169 HTH_IclR PF09339.5 52 9e-06 18.0 0.2 1 1 4e-07 3.5e-05 16.1 0.0 15 40 138 163 134 164 0.85 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 2_1 - 169 HTH_22 PF13309.1 64 0.0001 14.8 0.6 1 1 1e-05 0.00091 11.8 0.1 35 63 139 162 126 163 0.76 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_5 - 228 TIGR00095 TIGR00095 194 0.00015 13.9 0.0 1 2 0.00077 0.069 5.2 0.0 124 138 20 34 3 79 0.72 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 TIGR00095 TIGR00095 194 0.00015 13.9 0.0 2 2 0.00024 0.022 6.8 0.0 53 86 164 199 155 218 0.77 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_14 - 188 N6_Mtase PF02384.11 311 0.00019 13.3 0.0 1 2 1.6e-05 0.0015 10.4 0.0 28 64 32 68 21 83 0.87 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_14 - 188 N6_Mtase PF02384.11 311 0.00019 13.3 0.0 2 2 0.018 1.6 0.4 0.0 127 137 114 124 103 134 0.82 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_47 - 73 DUF2116 PF09889.4 59 3.9e-05 16.2 0.0 1 1 5.7e-07 5e-05 15.8 0.0 6 52 8 54 5 61 0.76 # 34264 # 34482 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 4_3 - 246 Methyltransf_4 PF02390.12 197 0.00013 13.8 0.1 1 1 2.7e-06 0.00024 12.9 0.0 17 52 27 62 3 102 0.72 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_40 - 877 FtsK_SpoIIIE PF01580.13 205 1.3e-05 17.4 0.1 1 2 2e-06 0.00018 13.7 0.0 39 63 477 505 464 508 0.84 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_40 - 877 FtsK_SpoIIIE PF01580.13 205 1.3e-05 17.4 0.1 2 2 0.016 1.4 1.0 0.0 75 166 531 626 530 646 0.80 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 2_1 - 169 HTH_40 PF14493.1 91 0.00044 13.2 0.5 1 1 1.8e-05 0.0016 11.4 0.1 7 32 135 160 130 166 0.89 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 2_1 - 169 HTH_38 PF13936.1 44 2.4e-06 19.8 1.4 1 1 5e-08 4.5e-06 19.0 0.0 9 41 130 162 128 165 0.93 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_40 - 877 MobB PF03205.9 140 0.00055 12.4 0.1 1 1 5.4e-05 0.0024 10.3 0.0 4 37 484 516 482 524 0.79 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_62 - 745 MobB PF03205.9 140 0.00074 12.0 0.0 1 1 4.3e-05 0.0019 10.7 0.0 7 34 192 219 188 225 0.89 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 3_2 - 195 TetR_N PF00440.18 47 2.9e-08 26.0 0.0 1 1 6.3e-10 5.6e-08 25.1 0.0 2 46 13 57 12 58 0.95 # 1353 # 1937 # -1 # ID=3_2;partial=00;start_type=ATG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.607 1_63 - 1757 AAA_19 PF13245.1 76 1e-07 24.5 1.4 1 1 8.9e-09 4e-07 22.5 0.3 7 76 981 1047 974 1047 0.74 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_34 - 123 AAA_19 PF13245.1 76 0.00061 12.3 0.0 1 1 2.2e-05 0.00096 11.7 0.0 13 37 91 115 82 122 0.78 # 25359 # 25727 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.417 1_34 - 123 KTI12 PF08433.5 270 0.00075 11.4 0.1 1 1 1.4e-05 0.0013 10.7 0.1 5 30 92 117 91 120 0.87 # 25359 # 25727 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.417 1_5 - 228 MethyltransfD12 PF02086.10 260 0.0005 12.3 0.0 1 2 0.022 2 0.5 0.0 178 188 21 31 14 91 0.83 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 MethyltransfD12 PF02086.10 260 0.0005 12.3 0.0 2 2 4e-05 0.0036 9.5 0.0 20 46 163 189 148 197 0.78 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 3_1 - 255 rve PF00665.21 120 9.6e-14 44.3 0.0 1 2 0.041 1.8 1.5 0.0 83 102 30 49 7 51 0.90 # 96 # 860 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 3_1 - 255 rve PF00665.21 120 9.6e-14 44.3 0.0 2 2 3.4e-14 1.5e-12 40.5 0.0 8 117 73 179 69 182 0.90 # 96 # 860 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 5_1 - 235 rve PF00665.21 120 2.9e-13 42.8 0.1 1 2 0.03 1.3 1.9 0.0 78 102 27 49 6 54 0.84 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 5_1 - 235 rve PF00665.21 120 2.9e-13 42.8 0.1 2 2 1.2e-13 5.4e-12 38.7 0.0 9 119 75 182 70 183 0.89 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_47 - 73 zf-ribbon_3 PF13248.1 26 0.001 11.1 2.9 1 2 1.5e-05 0.0013 10.7 2.3 5 22 8 25 5 28 0.93 # 34264 # 34482 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 1_47 - 73 zf-ribbon_3 PF13248.1 26 0.001 11.1 2.9 2 2 0.0004 0.036 6.2 0.7 3 15 20 32 18 40 0.75 # 34264 # 34482 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 1_14 - 188 Methyltransf_26 PF13659.1 117 2.3e-14 46.2 0.0 1 1 1.3e-15 4e-14 45.4 0.0 2 114 52 147 51 150 0.91 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_5 - 228 Methyltransf_26 PF13659.1 117 1.3e-12 40.6 0.1 1 2 1.1e-07 3.1e-06 20.0 0.0 54 114 4 71 2 74 0.73 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 Methyltransf_26 PF13659.1 117 1.3e-12 40.6 0.1 2 2 2.9e-07 8.6e-06 18.6 0.0 4 45 167 207 164 223 0.82 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 4_3 - 246 Methyltransf_26 PF13659.1 117 4e-09 29.3 0.0 1 1 2.2e-10 6.6e-09 28.6 0.0 2 83 31 106 30 200 0.81 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_63 - 1757 AAA_30 PF13604.1 196 9.6e-45 145.3 14.8 1 3 0.023 2.1 0.6 0.0 41 86 223 269 218 280 0.84 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_63 - 1757 AAA_30 PF13604.1 196 9.6e-45 145.3 14.8 2 3 9.4e-06 0.00083 11.7 3.8 7 147 420 552 416 562 0.84 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_63 - 1757 AAA_30 PF13604.1 196 9.6e-45 145.3 14.8 3 3 3.2e-44 2.8e-42 137.2 1.6 1 186 968 1156 968 1160 0.94 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 5_1 - 235 HTH_Tnp_1 PF01527.15 76 0.00022 14.0 0.3 1 1 5.4e-06 0.00048 12.9 0.3 4 51 6 58 4 63 0.79 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_62 - 745 TraG-D_C PF12696.2 128 4.7e-20 64.5 0.0 1 1 1.1e-21 1e-19 63.4 0.0 1 127 419 541 419 542 0.86 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 4_3 - 246 CMAS PF02353.15 273 0.00015 13.6 0.6 1 1 3e-06 0.00026 12.8 0.0 51 105 18 71 12 99 0.78 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 5_1 - 235 DDE_3 PF13358.1 146 0.00062 12.3 0.0 1 1 2.1e-05 0.0019 10.7 0.0 32 90 82 141 59 146 0.87 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 1_5 - 228 UPF0020 PF01170.13 180 6.3e-06 18.6 0.0 1 2 0.00016 0.015 7.6 0.0 104 119 18 33 7 88 0.73 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 UPF0020 PF01170.13 180 6.3e-06 18.6 0.0 2 2 6.2e-05 0.0055 9.0 0.0 28 54 163 189 158 221 0.67 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_14 - 188 Methyltransf_25 PF13649.1 101 0.0001 15.4 0.0 1 1 1.7e-06 0.00015 14.9 0.0 1 101 54 142 54 142 0.81 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_32 - 476 DivIC PF04977.10 80 0.00084 11.6 4.6 1 1 1.8e-05 0.0016 10.7 4.6 17 66 76 124 72 125 0.92 # 23413 # 24840 # 1 # ID=1_32;partial=00;start_type=ATG;rbs_motif=GGAGG;rbs_spacer=5-10bp;gc_cont=0.571 1_18 - 653 KorB PF08535.5 93 1.5e-05 17.9 0.0 1 1 6e-07 5.3e-05 16.1 0.0 2 43 152 193 151 204 0.93 # 12858 # 14816 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.584 1_5 - 228 N6_N4_Mtase PF01555.13 231 5.8e-37 120.1 0.0 1 2 1.3e-15 1.2e-13 43.8 0.0 1 114 21 124 21 133 0.89 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 N6_N4_Mtase PF01555.13 231 5.8e-37 120.1 0.0 2 2 5.4e-25 4.8e-23 74.5 0.0 169 228 141 200 126 203 0.90 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_4 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 1 3 0.062 5.5 -1.3 0.0 154 175 130 151 109 155 0.77 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_4 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 2 3 3.2e-06 0.00029 12.7 0.0 68 97 156 183 149 192 0.81 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_4 - 321 Hydantoinase_A PF01968.13 290 1.3e-08 26.9 0.2 3 3 8.3e-06 0.00074 11.4 0.0 214 265 242 297 198 307 0.78 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_62 - 745 AAA_16 PF13191.1 185 4e-05 16.4 0.0 1 1 4.3e-06 0.00019 14.2 0.0 21 57 182 219 179 264 0.81 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_34 - 123 AAA_16 PF13191.1 185 0.0011 11.7 0.1 1 1 4e-05 0.0018 11.0 0.1 22 48 86 112 75 119 0.88 # 25359 # 25727 # 1 # ID=1_34;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.417 4_3 - 246 NodS PF05401.6 201 2.3e-08 26.4 0.0 1 1 4.2e-10 3.7e-08 25.7 0.0 41 120 27 106 7 116 0.86 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 2_1 - 169 HTH_Tnp_IS630 PF01710.11 120 7.9e-05 15.1 0.0 1 1 1.7e-06 0.00015 14.2 0.0 8 44 131 167 128 168 0.90 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_62 - 745 AAA_28 PF13521.1 163 0.00037 13.2 0.0 1 1 1.1e-05 0.00097 11.9 0.0 2 37 188 228 187 252 0.78 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 5_1 - 235 HTH_32 PF13565.1 77 1.1e-06 22.1 0.2 1 1 1.1e-07 5e-06 20.0 0.0 26 76 5 50 2 51 0.83 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_1 - 255 HTH_32 PF13565.1 77 0.00017 15.1 0.2 1 1 1.3e-05 0.00059 13.4 0.2 37 76 15 50 6 51 0.83 # 96 # 860 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 1_18 - 653 HTH_23 PF13384.1 50 5.7e-07 21.9 0.7 1 1 2.2e-07 6.4e-06 18.5 0.0 13 40 149 176 143 180 0.91 # 12858 # 14816 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.584 5_1 - 235 HTH_23 PF13384.1 50 7e-06 18.4 0.5 1 2 0.047 1.4 1.6 0.0 7 27 11 35 7 36 0.69 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 5_1 - 235 HTH_23 PF13384.1 50 7e-06 18.4 0.5 2 2 5.6e-06 0.00017 14.0 0.1 28 42 41 55 40 62 0.87 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_1 - 169 HTH_23 PF13384.1 50 3.3e-05 16.3 0.3 1 1 1.1e-06 3.3e-05 16.3 0.3 5 39 129 163 125 167 0.87 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 2_1 - 169 HTH_7 PF02796.10 45 1.6e-13 43.1 0.5 1 1 4.3e-15 3.9e-13 41.9 0.1 1 44 124 164 124 165 0.97 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 4_5 - 63 zinc_ribbon_4 PF13717.1 36 1.7e-05 17.3 3.7 1 1 4.8e-07 4.3e-05 16.0 3.7 3 35 6 39 5 40 0.86 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 2_1 - 169 HTH_29 PF13551.1 112 8.3e-05 15.5 0.7 1 2 0.05 2.2 1.2 0.2 24 46 97 119 72 133 0.67 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 2_1 - 169 HTH_29 PF13551.1 112 8.3e-05 15.5 0.7 2 2 1.7e-05 0.00078 12.4 0.0 4 35 134 164 131 167 0.90 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_18 - 653 HTH_29 PF13551.1 112 0.00019 14.3 0.2 1 1 2e-05 0.0009 12.2 0.0 4 37 145 178 142 234 0.85 # 12858 # 14816 # 1 # ID=1_18;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.584 1_14 - 188 Met_10 PF02475.11 200 0.00044 12.6 0.0 1 1 7e-06 0.00063 12.1 0.0 99 189 48 132 38 145 0.78 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 5_1 - 235 DDE_Tnp_IS66 PF03050.9 271 2.4e-12 39.3 0.6 1 1 7.5e-14 3.3e-12 38.9 0.4 5 131 10 143 6 158 0.86 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 3_1 - 255 DDE_Tnp_IS66 PF03050.9 271 1e-09 30.7 0.4 1 1 3.4e-11 1.5e-09 30.2 0.4 11 133 16 144 8 183 0.86 # 96 # 860 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 4_3 - 246 Methyltransf_31 PF13847.1 152 9.8e-08 24.5 0.1 1 1 3.1e-09 1.4e-07 24.0 0.1 2 76 28 97 27 213 0.87 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_14 - 188 Methyltransf_31 PF13847.1 152 8.2e-07 21.5 0.0 1 1 2.2e-08 9.7e-07 21.2 0.0 5 118 52 156 48 183 0.85 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_62 - 745 TrwB_AAD_bind PF10412.4 386 7e-149 488.3 0.0 1 1 2e-150 8.7e-149 488.0 0.0 2 386 172 561 171 561 0.99 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_40 - 877 TrwB_AAD_bind PF10412.4 386 7.5e-07 20.7 0.3 1 1 4.8e-08 2.1e-06 19.2 0.0 15 53 480 518 471 548 0.80 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_5 - 228 Methyltransf_15 PF09445.5 164 0.00025 13.3 0.0 1 2 0.012 1.1 1.5 0.0 53 79 4 29 2 33 0.91 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_5 - 228 Methyltransf_15 PF09445.5 164 0.00025 13.3 0.0 2 2 4.2e-05 0.0038 9.5 0.0 3 31 166 194 164 209 0.86 # 4191 # 4874 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.579 1_14 - 188 Methyltransf_12 PF08242.7 99 1.2e-05 18.5 0.0 1 1 2e-07 1.8e-05 18.0 0.0 1 99 55 144 55 144 0.86 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_5 - 63 HTH_Tnp_IS1 PF12759.2 46 7.2e-13 40.6 0.1 1 1 1.4e-14 1.3e-12 39.8 0.1 1 21 43 63 43 63 0.98 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_40 - 877 DUF87 PF01935.12 229 1.9e-07 23.8 0.0 1 1 7e-09 6.3e-07 22.1 0.0 26 222 483 670 469 677 0.77 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 5_1 - 235 HTH_28 PF13518.1 52 5.1e-05 16.0 1.2 1 1 5.1e-06 0.00023 14.0 1.2 22 36 40 54 13 55 0.76 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 2_1 - 169 HTH_28 PF13518.1 52 0.0001 15.0 0.0 1 1 7.3e-06 0.00032 13.5 0.0 8 33 137 162 131 167 0.82 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 1_14 - 188 TIGR03533 TIGR03533 284 2e-05 16.5 0.0 1 1 3.5e-07 3.1e-05 15.8 0.0 116 210 45 133 37 141 0.87 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_14 - 188 TIGR03534 TIGR03534 253 2.8e-08 25.9 0.0 1 1 7.4e-10 3.3e-08 25.7 0.0 81 175 45 131 11 148 0.85 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_3 - 246 TIGR03534 TIGR03534 253 5.9e-07 21.6 0.0 1 1 2.5e-08 1.1e-06 20.7 0.0 73 166 14 103 12 119 0.80 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_3 - 246 Methyltransf_32 PF13679.1 141 1.1e-05 17.9 0.0 1 1 1.9e-07 1.7e-05 17.3 0.0 12 70 17 68 9 121 0.82 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_63 - 1757 UvrD_C_2 PF13538.1 104 1.4e-07 24.4 0.7 1 2 0.014 1.2 2.1 0.0 6 43 1227 1264 1223 1294 0.75 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_63 - 1757 UvrD_C_2 PF13538.1 104 1.4e-07 24.4 0.7 2 2 5.2e-08 4.6e-06 19.5 0.2 3 102 1341 1444 1339 1446 0.77 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 4_3 - 246 TIGR00755 TIGR00755 256 1.4e-44 144.7 2.8 1 1 3.9e-46 1.7e-44 144.4 2.8 5 227 5 221 1 235 0.88 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_14 - 188 TIGR00755 TIGR00755 256 2.3e-09 29.3 0.0 1 1 6.8e-11 3e-09 28.9 0.0 8 105 29 123 25 134 0.90 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_4 - 321 StbA PF06406.6 318 7.2e-157 513.9 1.5 1 1 9e-159 8e-157 513.8 1.5 1 317 1 317 1 318 0.99 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_4 - 321 YbaB_DNA_bd PF02575.11 93 0.00053 12.7 0.1 1 3 0.038 3.4 0.5 0.0 33 63 129 160 112 160 0.80 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_4 - 321 YbaB_DNA_bd PF02575.11 93 0.00053 12.7 0.1 2 3 0.028 2.5 0.9 0.0 63 78 201 216 195 223 0.84 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_4 - 321 YbaB_DNA_bd PF02575.11 93 0.00053 12.7 0.1 3 3 0.00045 0.04 6.6 0.0 63 87 247 271 235 276 0.84 # 2711 # 3673 # -1 # ID=1_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.390 1_47 - 73 DZR PF12773.2 50 7e-05 15.4 1.5 1 1 8.8e-07 7.9e-05 15.2 1.5 13 49 6 25 1 36 0.59 # 34264 # 34482 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 1_63 - 1757 Viral_helicase1 PF01443.13 234 0.00078 11.7 0.0 1 2 0.00032 0.029 6.6 0.0 1 23 988 1011 988 1162 0.77 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_63 - 1757 Viral_helicase1 PF01443.13 234 0.00078 11.7 0.0 2 2 0.0062 0.55 2.4 0.0 171 234 1387 1447 1336 1447 0.63 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 4_3 - 246 DOT1 PF08123.8 205 2.9e-05 16.2 0.2 1 1 8.2e-07 7.3e-05 14.9 0.0 28 88 15 73 11 100 0.79 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_40 - 877 Pox_A32 PF04665.7 241 0.00053 12.0 0.1 1 1 1.8e-05 0.0016 10.4 0.0 6 38 473 505 470 520 0.85 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_62 - 745 T4SS-DNA_transf PF02534.9 469 2.6e-10 32.1 0.0 1 1 2.6e-11 1.2e-09 30.0 0.0 263 366 381 481 198 500 0.83 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 1_40 - 877 T4SS-DNA_transf PF02534.9 469 6e-05 14.4 0.0 1 2 0.0049 0.22 2.7 0.0 105 182 534 605 476 625 0.84 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_40 - 877 T4SS-DNA_transf PF02534.9 469 6e-05 14.4 0.0 2 2 4.4e-05 0.002 9.4 0.0 319 378 712 770 660 772 0.89 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_14 - 188 MTS PF05175.9 170 7.4e-10 31.2 0.0 1 1 2.3e-11 1e-09 30.7 0.0 31 142 50 150 41 167 0.84 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_3 - 246 MTS PF05175.9 170 5.5e-08 25.1 0.0 1 1 2e-09 9e-08 24.4 0.0 24 118 22 113 9 121 0.85 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_3 - 246 Methyltransf_23 PF13489.1 161 8.9e-07 21.5 0.1 1 1 2.9e-08 2.6e-06 20.0 0.1 7 60 16 85 9 225 0.83 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_5 - 63 zinc_ribbon_5 PF13719.1 37 5.7e-06 18.6 3.3 1 1 1.7e-07 1.5e-05 17.3 3.3 3 36 6 40 5 41 0.83 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 3_1 - 255 DDE_Tnp_IS240 PF13610.1 140 9.1e-54 174.0 0.0 1 1 2.6e-55 1.2e-53 173.6 0.0 3 139 73 211 71 212 0.98 # 96 # 860 # 1 # ID=3_1;partial=00;start_type=ATG;rbs_motif=GGA/GAG/AGG;rbs_spacer=5-10bp;gc_cont=0.610 5_1 - 235 DDE_Tnp_IS240 PF13610.1 140 1.9e-53 172.9 0.1 1 1 6e-55 2.7e-53 172.5 0.1 4 139 75 212 73 213 0.99 # 64 # 768 # 1 # ID=5_1;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.529 4_5 - 63 Zn_Tnp_IS1595 PF12760.2 46 5.7e-05 15.7 1.8 1 1 9.6e-07 8.6e-05 15.1 1.8 21 46 8 38 4 38 0.75 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_47 - 73 zinc_ribbon_2 PF13240.1 23 0.00026 13.2 2.0 1 1 3.6e-06 0.00032 12.9 2.0 2 19 8 25 7 34 0.93 # 34264 # 34482 # -1 # ID=1_47;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.452 2_1 - 169 TrmB PF01978.14 68 4.7e-05 15.8 0.0 1 1 9.8e-07 8.7e-05 15.0 0.0 19 44 138 163 133 164 0.89 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 3_4 - 302 LYTB PF02401.13 281 0.00061 11.5 0.0 1 1 2e-05 0.0018 9.9 0.0 236 272 81 117 70 124 0.91 # 3172 # 4077 # -1 # ID=3_4;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.657 1_40 - 877 AAA_10 PF12846.2 304 4.6e-49 160.1 0.0 1 1 1.8e-50 8e-49 159.4 0.0 1 299 480 774 480 777 0.89 # 28285 # 30915 # 1 # ID=1_40;partial=00;start_type=ATG;rbs_motif=AGGA;rbs_spacer=5-10bp;gc_cont=0.542 1_62 - 745 AAA_10 PF12846.2 304 5.5e-08 25.3 0.0 1 1 1.3e-08 5.8e-07 21.9 0.0 3 296 187 494 186 500 0.67 # 46077 # 48311 # 1 # ID=1_62;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.520 2_1 - 169 HTH_20 PF12840.2 61 5.7e-05 15.7 0.1 1 1 7.5e-06 0.00067 12.2 0.1 2 43 92 160 91 163 0.91 # 55 # 561 # 1 # ID=2_1;partial=00;start_type=ATG;rbs_motif=None;rbs_spacer=None;gc_cont=0.529 4_3 - 246 PCMT PF01135.14 210 6.9e-07 21.7 0.0 1 1 1.6e-08 1.4e-06 20.7 0.0 58 122 14 75 2 87 0.83 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_3 - 246 RrnaAD PF00398.15 262 2.6e-74 242.2 6.7 1 1 6.6e-76 2.9e-74 242.1 6.7 3 261 2 242 1 243 0.96 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 1_14 - 188 RrnaAD PF00398.15 262 3e-09 29.0 0.0 1 1 8.4e-11 3.8e-09 28.6 0.0 9 113 29 128 24 150 0.88 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 1_14 - 188 Methyltransf_18 PF12847.2 112 2.6e-10 33.7 0.0 1 1 1.3e-11 5.6e-10 32.6 0.0 4 109 53 146 50 148 0.89 # 10599 # 11162 # 1 # ID=1_14;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.583 4_3 - 246 Methyltransf_18 PF12847.2 112 1.2e-09 31.5 0.0 1 1 3.9e-11 1.7e-09 31.0 0.0 2 74 30 98 29 153 0.87 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_3 - 246 Methyltransf_11 PF08241.7 95 5.3e-05 16.5 0.0 1 1 1.2e-06 0.00011 15.5 0.0 2 59 35 92 34 100 0.85 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 4_5 - 63 DUF2387 PF09526.5 71 6.7e-05 15.6 0.2 1 1 9.1e-07 8.1e-05 15.3 0.2 10 46 7 46 5 61 0.74 # 1920 # 2108 # 1 # ID=4_5;partial=01;start_type=GTG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.524 1_63 - 1757 AAA_11 PF13086.1 236 0.0001 14.7 2.8 1 1 3.1e-06 0.00028 13.2 0.0 2 75 969 1039 968 1059 0.80 # 48311 # 53581 # 1 # ID=1_63;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.602 1_16 - 174 SSB PF00436.20 104 3e-41 132.3 0.3 1 1 4.7e-43 4.2e-41 131.8 0.3 1 101 6 109 6 112 0.96 # 11984 # 12505 # 1 # ID=1_16;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.575 4_3 - 246 TRM13 PF05206.9 259 0.00012 14.1 0.1 1 1 2.1e-06 0.00019 13.5 0.1 4 67 15 78 12 101 0.79 # 420 # 1157 # 1 # ID=4_3;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.332 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/065aca29-4156-47d2-ba11-ad1b08c14724 # Target file: checkm_output/bins/pm1035/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1035/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/065aca29-4156-47d2-ba11-ad1b08c14724 checkm_output/bins/pm1035/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:33:12 2017 # [ok]