# --- full sequence --- -------------- this domain ------------- hmm coord ali coord env coord # target name accession tlen query name accession qlen E-value score bias # of c-Evalue i-Evalue score bias from to from to from to acc description of target #------------------- ---------- ----- -------------------- ---------- ----- --------- ------ ----- --- --- --------- --------- ------ ----- ----- ----- ----- ----- ----- ----- ---- --------------------- 1_6 - 294 RepC PF06504.6 283 1.9e-152 495.3 0.0 1 1 2.7e-153 2.1e-152 495.1 0.0 7 282 3 277 1 278 0.98 # 5098 # 5979 # 1 # ID=1_6;partial=00;start_type=GTG;rbs_motif=AGxAGG/AGGxGG;rbs_spacer=5-10bp;gc_cont=0.634 1_5 - 288 AAA_25 PF13481.1 194 6.9e-44 138.9 0.1 1 1 1.3e-44 1.1e-43 138.3 0.1 13 193 7 183 4 184 0.89 # 4248 # 5111 # 1 # ID=1_5;partial=00;start_type=ATG;rbs_motif=AGGAG;rbs_spacer=5-10bp;gc_cont=0.662 1_2 - 156 DAO PF01266.19 358 5.1e-06 14.8 0.2 1 1 7.3e-07 5.8e-06 14.6 0.2 80 161 37 120 3 128 0.85 # 396 # 863 # -1 # ID=1_2;partial=00;start_type=ATG;rbs_motif=GGAG/GAGG;rbs_spacer=5-10bp;gc_cont=0.581 # # Program: hmmsearch # Version: 3.1b1 (May 2013) # Pipeline mode: SEARCH # Query file: /tmp/510b213e-ef92-4fbe-bc03-0c77055e83a2 # Target file: checkm_output/bins/pm1015/genes.faa # Option settings: hmmsearch --domtblout checkm_output/bins/pm1015/hmmer.analyze.txt --noali --notextw -E 0.1 --domE 0.1 --cpu 1 /tmp/510b213e-ef92-4fbe-bc03-0c77055e83a2 checkm_output/bins/pm1015/genes.faa # Current dir: /mnt/data/azomer/reads-for-assembly/files/output/allcontigs/output_1512029421078392887 # Date: Thu Nov 30 09:32:11 2017 # [ok]